• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 16:28:23 UTC
• checking for file ‘neonPlantEcology/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘neonPlantEcology’ version ‘1.6.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘neonPlantEcology’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... NOTE   Missing dependency on R >= 4.2.0 because package code uses the pipe   placeholder syntax added in R 4.2.0.   File(s) using such syntax:     ‘functions.R’
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/10s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [2s/2s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [39s/45s] OK Examples with CPU (user + system) or elapsed time > 5s                           user system elapsed npe_summary 7.981 0.112 9.152 npe_change_native_status 5.829 0.449 6.979 npe_community_matrix 5.142 0.117 5.681 npe_cm_metadata 5.031 0.169 5.861 npe_longform 4.898 0.043 5.489
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [39s/43s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp02wCmN’ ‘~/tmp/scratch/Rtmp0An9m8’   ‘~/tmp/scratch/Rtmp0PIKwz’ ‘~/tmp/scratch/Rtmp0lZqlu’   ‘~/tmp/scratch/Rtmp17IhPa’ ‘~/tmp/scratch/Rtmp1GRjw2’   ‘~/tmp/scratch/Rtmp1HXsuX’ ‘~/tmp/scratch/Rtmp1KlDN7’   ‘~/tmp/scratch/Rtmp1gTwF1’ ‘~/tmp/scratch/Rtmp2IAlnI’   ‘~/tmp/scratch/Rtmp2LgycG’ ‘~/tmp/scratch/Rtmp3C5GMq’   ‘~/tmp/scratch/Rtmp3RGf5Y’ ‘~/tmp/scratch/Rtmp527Yd8’   ‘~/tmp/scratch/Rtmp5JYfFG’ ‘~/tmp/scratch/Rtmp5mQqWI’   ‘~/tmp/scratch/Rtmp5oCJxm’ ‘~/tmp/scratch/Rtmp5tZrHj’   ‘~/tmp/scratch/Rtmp6NJZ94’ ‘~/tmp/scratch/Rtmp6mJKkb’   ‘~/tmp/scratch/Rtmp6tMxU4’ ‘~/tmp/scratch/Rtmp7H4oQK’   ‘~/tmp/scratch/Rtmp9Ccvrg’ ‘~/tmp/scratch/RtmpAWUvbI’   ‘~/tmp/scratch/RtmpAkTbk3’ ‘~/tmp/scratch/RtmpArHxgq’   ‘~/tmp/scratch/RtmpAzwkY9’ ‘~/tmp/scratch/RtmpBW8wYt’   ‘~/tmp/scratch/RtmpCBJLuJ’ ‘~/tmp/scratch/RtmpCuNP1l’   ‘~/tmp/scratch/RtmpCxKitD’ ‘~/tmp/scratch/RtmpD3T3uo’   ‘~/tmp/scratch/RtmpDY49lJ’ ‘~/tmp/scratch/RtmpDqmgCM’   ‘~/tmp/scratch/RtmpENkluU’ ‘~/tmp/scratch/RtmpEYcHf5’   ‘~/tmp/scratch/RtmpEvr4yl’ ‘~/tmp/scratch/RtmpFlf8ZO’   ‘~/tmp/scratch/RtmpG2bUCe’ ‘~/tmp/scratch/RtmpG2nFYr’   ‘~/tmp/scratch/RtmpG78777’ ‘~/tmp/scratch/RtmpG8Zkh0’   ‘~/tmp/scratch/RtmpGSBeRa’ ‘~/tmp/scratch/RtmpGgx5fo’   ‘~/tmp/scratch/RtmpGq79Nm’ ‘~/tmp/scratch/RtmpHXKjRe’   ‘~/tmp/scratch/RtmpICQJfZ’ ‘~/tmp/scratch/RtmpJEJ5TE’   ‘~/tmp/scratch/RtmpJO5tvz’ ‘~/tmp/scratch/RtmpJVOcJ7’   ‘~/tmp/scratch/RtmpKDBiR2’ ‘~/tmp/scratch/RtmpKRfIMd’   ‘~/tmp/scratch/RtmpKtBDwK’ ‘~/tmp/scratch/RtmpLjGyI4’   ‘~/tmp/scratch/RtmpLzlnPy’ ‘~/tmp/scratch/RtmpM5Nf2Q’   ‘~/tmp/scratch/RtmpNQfLVv’ ‘~/tmp/scratch/RtmpNtvaG7’   ‘~/tmp/scratch/RtmpPbXmV6’ ‘~/tmp/scratch/RtmpQKCNj1’   ‘~/tmp/scratch/RtmpQLrpD9’ ‘~/tmp/scratch/RtmpR7cd8j’   ‘~/tmp/scratch/RtmpRGBols’ ‘~/tmp/scratch/RtmpRLh7d0’   ‘~/tmp/scratch/RtmpSB1WmV’ ‘~/tmp/scratch/RtmpT1nQkX’   ‘~/tmp/scratch/RtmpTyWdiz’ ‘~/tmp/scratch/RtmpTz22s9’   ‘~/tmp/scratch/RtmpU0sgfA’ ‘~/tmp/scratch/RtmpV1VUkU’   ‘~/tmp/scratch/RtmpVILvvY’ ‘~/tmp/scratch/RtmpWHRIh6’   ‘~/tmp/scratch/RtmpWUuhud’ ‘~/tmp/scratch/RtmpWWOwom’   ‘~/tmp/scratch/RtmpWd8gKv’ ‘~/tmp/scratch/RtmpWjq828’   ‘~/tmp/scratch/RtmpWnQWQV’ ‘~/tmp/scratch/RtmpXR1DZ8’   ‘~/tmp/scratch/RtmpXcM7RU’ ‘~/tmp/scratch/RtmpYB90n5’   ‘~/tmp/scratch/RtmpYC8lsO’ ‘~/tmp/scratch/RtmpYjYHc2’   ‘~/tmp/scratch/RtmpYnMvLh’ ‘~/tmp/scratch/RtmpYsbPQD’   ‘~/tmp/scratch/RtmpZcXApW’ ‘~/tmp/scratch/Rtmpa1gtRY’   ‘~/tmp/scratch/RtmpaH9pzv’ ‘~/tmp/scratch/Rtmpb0CoBF’   ‘~/tmp/scratch/RtmpbT68J4’ ‘~/tmp/scratch/Rtmpbszj90’   ‘~/tmp/scratch/Rtmpc4lcX5’ ‘~/tmp/scratch/RtmpcQChSi’   ‘~/tmp/scratch/Rtmpcc7yvN’ ‘~/tmp/scratch/RtmpccPDoj’   ‘~/tmp/scratch/Rtmpci9rwq’ ‘~/tmp/scratch/RtmpfByGd0’   ‘~/tmp/scratch/RtmpfhNdOg’ ‘~/tmp/scratch/RtmpfnfpAm’   ‘~/tmp/scratch/RtmpgDJdYR’ ‘~/tmp/scratch/RtmpgZArER’   ‘~/tmp/scratch/Rtmpge9JFb’ ‘~/tmp/scratch/RtmpgesZjC’   ‘~/tmp/scratch/Rtmpgt2UGH’ ‘~/tmp/scratch/RtmphB66Qd’   ‘~/tmp/scratch/RtmphLtN1g’ ‘~/tmp/scratch/RtmphOYtXX’   ‘~/tmp/scratch/RtmphZlBQT’ ‘~/tmp/scratch/RtmphvqUwz’   ‘~/tmp/scratch/RtmphynViL’ ‘~/tmp/scratch/RtmpiwyZJr’   ‘~/tmp/scratch/RtmpixcDuC’ ‘~/tmp/scratch/RtmpizqgxD’   ‘~/tmp/scratch/RtmpjRhPlC’ ‘~/tmp/scratch/RtmpjWef6o’   ‘~/tmp/scratch/Rtmpjqd6Y8’ ‘~/tmp/scratch/RtmpkZCAXv’   ‘~/tmp/scratch/RtmpkbgKgn’ ‘~/tmp/scratch/RtmplEjwF1’   ‘~/tmp/scratch/RtmplUHOxw’ ‘~/tmp/scratch/RtmpliuiK3’   ‘~/tmp/scratch/Rtmpm45GO2’ ‘~/tmp/scratch/Rtmpm6zJiA’   ‘~/tmp/scratch/RtmpmtA0h3’ ‘~/tmp/scratch/Rtmpn3CSvU’   ‘~/tmp/scratch/RtmpnNMtWM’ ‘~/tmp/scratch/RtmpoU8fSM’   ‘~/tmp/scratch/RtmpofNLZv’ ‘~/tmp/scratch/RtmppI4BSf’   ‘~/tmp/scratch/RtmppVdpGu’ ‘~/tmp/scratch/RtmpqA9GXJ’   ‘~/tmp/scratch/RtmpqIPXmA’ ‘~/tmp/scratch/RtmpqkZudl’   ‘~/tmp/scratch/Rtmpqn9BBn’ ‘~/tmp/scratch/RtmprBbRQr’   ‘~/tmp/scratch/RtmprEiXQi’ ‘~/tmp/scratch/RtmprPhbNO’   ‘~/tmp/scratch/Rtmprvjw4L’ ‘~/tmp/scratch/RtmpsKceYF’   ‘~/tmp/scratch/RtmptYCdMZ’ ‘~/tmp/scratch/RtmptZncMV’   ‘~/tmp/scratch/RtmptooCcl’ ‘~/tmp/scratch/RtmpuCMzyb’   ‘~/tmp/scratch/RtmpuWMIij’ ‘~/tmp/scratch/RtmpvYDlnW’   ‘~/tmp/scratch/RtmpwFAuTj’ ‘~/tmp/scratch/RtmpwJNHV6’   ‘~/tmp/scratch/RtmpwVxaHv’ ‘~/tmp/scratch/RtmpwX6DwS’   ‘~/tmp/scratch/Rtmpx2ctEX’ ‘~/tmp/scratch/RtmpxJlore’   ‘~/tmp/scratch/RtmpyOeXNZ’ ‘~/tmp/scratch/RtmpyskJH5’   ‘~/tmp/scratch/Rtmpyv8HMP’ ‘~/tmp/scratch/RtmpzCQiKh’   ‘~/tmp/scratch/RtmpzMQSdw’ ‘~/tmp/scratch/RtmpzegpeY’   ‘~/tmp/scratch/xvfb-run.01Nxov’ ‘~/tmp/scratch/xvfb-run.1CFw37’   ‘~/tmp/scratch/xvfb-run.3Z5fYV’ ‘~/tmp/scratch/xvfb-run.3cbzJw’   ‘~/tmp/scratch/xvfb-run.4MoGnI’ ‘~/tmp/scratch/xvfb-run.5OTPfK’   ‘~/tmp/scratch/xvfb-run.5OYfZ1’ ‘~/tmp/scratch/xvfb-run.6n3fpA’   ‘~/tmp/scratch/xvfb-run.72l3hy’ ‘~/tmp/scratch/xvfb-run.7MY75E’   ‘~/tmp/scratch/xvfb-run.7QLiTX’ ‘~/tmp/scratch/xvfb-run.7TbasE’   ‘~/tmp/scratch/xvfb-run.82LVVN’ ‘~/tmp/scratch/xvfb-run.9zmKvy’   ‘~/tmp/scratch/xvfb-run.AcyTjm’ ‘~/tmp/scratch/xvfb-run.CQyWXY’   ‘~/tmp/scratch/xvfb-run.Doldxj’ ‘~/tmp/scratch/xvfb-run.DuJTOe’   ‘~/tmp/scratch/xvfb-run.E9JKpj’ ‘~/tmp/scratch/xvfb-run.FHpuAi’   ‘~/tmp/scratch/xvfb-run.HbzIFa’ ‘~/tmp/scratch/xvfb-run.JX3Qgq’   ‘~/tmp/scratch/xvfb-run.KKr1Sz’ ‘~/tmp/scratch/xvfb-run.LqUx3S’   ‘~/tmp/scratch/xvfb-run.MB34MM’ ‘~/tmp/scratch/xvfb-run.NY0Gvi’   ‘~/tmp/scratch/xvfb-run.OtID5r’ ‘~/tmp/scratch/xvfb-run.P5F7aT’   ‘~/tmp/scratch/xvfb-run.PDreWZ’ ‘~/tmp/scratch/xvfb-run.QJWYD6’   ‘~/tmp/scratch/xvfb-run.ShkzS1’ ‘~/tmp/scratch/xvfb-run.TpmRJ0’   ‘~/tmp/scratch/xvfb-run.UmwTvD’ ‘~/tmp/scratch/xvfb-run.VB3NuR’   ‘~/tmp/scratch/xvfb-run.VH0P1D’ ‘~/tmp/scratch/xvfb-run.ZTQmhx’   ‘~/tmp/scratch/xvfb-run.ZjwdQf’ ‘~/tmp/scratch/xvfb-run.bRkaUr’   ‘~/tmp/scratch/xvfb-run.bSficM’ ‘~/tmp/scratch/xvfb-run.dgYq6Q’   ‘~/tmp/scratch/xvfb-run.hSsTKB’ ‘~/tmp/scratch/xvfb-run.hVrhLp’   ‘~/tmp/scratch/xvfb-run.idqwUt’ ‘~/tmp/scratch/xvfb-run.j1aMUj’   ‘~/tmp/scratch/xvfb-run.jXqn6X’ ‘~/tmp/scratch/xvfb-run.jst07t’   ‘~/tmp/scratch/xvfb-run.khi3nT’ ‘~/tmp/scratch/xvfb-run.l0spWP’   ‘~/tmp/scratch/xvfb-run.l6rU3s’ ‘~/tmp/scratch/xvfb-run.lpiV3d’   ‘~/tmp/scratch/xvfb-run.mUoUyh’ ‘~/tmp/scratch/xvfb-run.myhkPI’   ‘~/tmp/scratch/xvfb-run.oLAj9q’ ‘~/tmp/scratch/xvfb-run.piwij9’   ‘~/tmp/scratch/xvfb-run.prMI1D’ ‘~/tmp/scratch/xvfb-run.sHH0RP’   ‘~/tmp/scratch/xvfb-run.tLomf8’ ‘~/tmp/scratch/xvfb-run.u4iYwq’   ‘~/tmp/scratch/xvfb-run.u7pZjK’ ‘~/tmp/scratch/xvfb-run.uGdJpl’   ‘~/tmp/scratch/xvfb-run.ufa8z7’ ‘~/tmp/scratch/xvfb-run.vXl4Kq’   ‘~/tmp/scratch/xvfb-run.vy5q1A’ ‘~/tmp/scratch/xvfb-run.wDwa4B’   ‘~/tmp/scratch/xvfb-run.zCUUZV’
• DONE

Status: 2 NOTEs