• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 16:39:31 UTC
• checking for file ‘ncodeR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ncodeR’ version ‘0.2.0.1’
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Cody L Marquart <cody.marquart@wisc.edu>’ The BugReports field in DESCRIPTION has   https://gitlab.com/epistemic-analytics/qe-packages/ncoder/issues which should likely be   https://gitlab.com/epistemic-analytics/qe-packages/-/issues instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘ncodeR’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/8s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [1s/2s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [12s/14s] OK   Running ‘testthat.R’ [11s/14s]
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0PrN1K’ ‘~/tmp/scratch/Rtmp0Ws5yj’   ‘~/tmp/scratch/Rtmp0ZbPw7’ ‘~/tmp/scratch/Rtmp0bItl7’   ‘~/tmp/scratch/Rtmp0vRaKG’ ‘~/tmp/scratch/Rtmp16Kf8z’   ‘~/tmp/scratch/Rtmp1AuphR’ ‘~/tmp/scratch/Rtmp1EExyR’   ‘~/tmp/scratch/Rtmp26l158’ ‘~/tmp/scratch/Rtmp2sBRoQ’   ‘~/tmp/scratch/Rtmp37B822’ ‘~/tmp/scratch/Rtmp39Vel0’   ‘~/tmp/scratch/Rtmp3h2NrD’ ‘~/tmp/scratch/Rtmp4JPmlt’   ‘~/tmp/scratch/Rtmp4OdUX8’ ‘~/tmp/scratch/Rtmp4aHMZR’   ‘~/tmp/scratch/Rtmp5YY8Yb’ ‘~/tmp/scratch/Rtmp5oHM43’   ‘~/tmp/scratch/Rtmp6Q2DrT’ ‘~/tmp/scratch/Rtmp73tKfP’   ‘~/tmp/scratch/Rtmp7EWNsu’ ‘~/tmp/scratch/Rtmp8EEwpG’   ‘~/tmp/scratch/Rtmp8Mkly4’ ‘~/tmp/scratch/RtmpA6lOsM’   ‘~/tmp/scratch/RtmpAUMQ84’ ‘~/tmp/scratch/RtmpC3E0jr’   ‘~/tmp/scratch/RtmpC6ApL9’ ‘~/tmp/scratch/RtmpCJCblV’   ‘~/tmp/scratch/RtmpCJVZMQ’ ‘~/tmp/scratch/RtmpCdpik2’   ‘~/tmp/scratch/RtmpCe8MBh’ ‘~/tmp/scratch/RtmpDTCH94’   ‘~/tmp/scratch/RtmpELFe0H’ ‘~/tmp/scratch/RtmpEffzAC’   ‘~/tmp/scratch/RtmpF1mmmp’ ‘~/tmp/scratch/RtmpFE08Ed’   ‘~/tmp/scratch/RtmpFEhKu1’ ‘~/tmp/scratch/RtmpG8o20C’   ‘~/tmp/scratch/RtmpGjQYOp’ ‘~/tmp/scratch/RtmpGl5qZS’   ‘~/tmp/scratch/RtmpHC4bvU’ ‘~/tmp/scratch/RtmpHpK5o9’   ‘~/tmp/scratch/RtmpIWAQhJ’ ‘~/tmp/scratch/RtmpIzyuOx’   ‘~/tmp/scratch/RtmpLBlHvA’ ‘~/tmp/scratch/RtmpLH4Zj0’   ‘~/tmp/scratch/RtmpMmGhCi’ ‘~/tmp/scratch/RtmpMyR3je’   ‘~/tmp/scratch/RtmpNgQRzS’ ‘~/tmp/scratch/RtmpOkYX8s’   ‘~/tmp/scratch/RtmpOzjbTp’ ‘~/tmp/scratch/RtmpPKSVgs’   ‘~/tmp/scratch/RtmpQACSVH’ ‘~/tmp/scratch/RtmpQQWOyA’   ‘~/tmp/scratch/RtmpQVtTUg’ ‘~/tmp/scratch/RtmpQcmZ2I’   ‘~/tmp/scratch/RtmpR9tYEI’ ‘~/tmp/scratch/RtmpSKXkm0’   ‘~/tmp/scratch/RtmpSX4jt6’ ‘~/tmp/scratch/RtmpTAKgDa’   ‘~/tmp/scratch/RtmpTARZ15’ ‘~/tmp/scratch/RtmpTELLoq’   ‘~/tmp/scratch/RtmpTRIPNO’ ‘~/tmp/scratch/RtmpTzKjtO’   ‘~/tmp/scratch/RtmpV1tn5d’ ‘~/tmp/scratch/RtmpW0gjne’   ‘~/tmp/scratch/RtmpWDvaGw’ ‘~/tmp/scratch/RtmpXCBV7s’   ‘~/tmp/scratch/RtmpYDP7ca’ ‘~/tmp/scratch/RtmpYZmpha’   ‘~/tmp/scratch/RtmpYcRk26’ ‘~/tmp/scratch/RtmpalqC6N’   ‘~/tmp/scratch/Rtmpb6aqFf’ ‘~/tmp/scratch/RtmpbPFIGA’   ‘~/tmp/scratch/RtmpbpVWIp’ ‘~/tmp/scratch/RtmpbszTPW’   ‘~/tmp/scratch/RtmpcCAIgj’ ‘~/tmp/scratch/RtmpcTFbOX’   ‘~/tmp/scratch/RtmpcfI1Sl’ ‘~/tmp/scratch/RtmpczI4Y4’   ‘~/tmp/scratch/RtmpdkxOX5’ ‘~/tmp/scratch/RtmpdoypSq’   ‘~/tmp/scratch/RtmperQIEv’ ‘~/tmp/scratch/Rtmpf7Ey79’   ‘~/tmp/scratch/RtmpfYD95y’ ‘~/tmp/scratch/RtmpffZLjw’   ‘~/tmp/scratch/Rtmpg2dBX8’ ‘~/tmp/scratch/Rtmpg6a1HD’   ‘~/tmp/scratch/RtmpgypLKY’ ‘~/tmp/scratch/Rtmph2acJw’   ‘~/tmp/scratch/Rtmph6drE4’ ‘~/tmp/scratch/Rtmpi6CpLo’   ‘~/tmp/scratch/RtmpiDJqGR’ ‘~/tmp/scratch/RtmpinDIbI’   ‘~/tmp/scratch/RtmpjS9Nn0’ ‘~/tmp/scratch/RtmpjnZj3X’   ‘~/tmp/scratch/RtmpkCjloV’ ‘~/tmp/scratch/Rtmpl77l6z’   ‘~/tmp/scratch/Rtmpm6qzTT’ ‘~/tmp/scratch/RtmpmBkK1z’   ‘~/tmp/scratch/RtmpmSyYyw’ ‘~/tmp/scratch/RtmpmayiBg’   ‘~/tmp/scratch/RtmpmcLkzg’ ‘~/tmp/scratch/RtmpmiyafT’   ‘~/tmp/scratch/RtmpoG8u9I’ ‘~/tmp/scratch/RtmppQR3hA’   ‘~/tmp/scratch/RtmpqAfV7G’ ‘~/tmp/scratch/RtmpqpXs6o’   ‘~/tmp/scratch/Rtmps1OQPw’ ‘~/tmp/scratch/RtmpsUVAnw’   ‘~/tmp/scratch/RtmpslBXMh’ ‘~/tmp/scratch/RtmpsuGY9H’   ‘~/tmp/scratch/Rtmptb88yt’ ‘~/tmp/scratch/RtmpuCdAMf’   ‘~/tmp/scratch/Rtmpv0K0lh’ ‘~/tmp/scratch/Rtmpv8fGMj’   ‘~/tmp/scratch/RtmpvIXBDF’ ‘~/tmp/scratch/RtmpvVvtKY’   ‘~/tmp/scratch/Rtmpvwjfa3’ ‘~/tmp/scratch/RtmpwZNY7B’   ‘~/tmp/scratch/Rtmpwjiduc’ ‘~/tmp/scratch/RtmpxrrPVF’   ‘~/tmp/scratch/Rtmpxz87b3’ ‘~/tmp/scratch/Rtmpy4C3kZ’   ‘~/tmp/scratch/RtmpyT68qO’ ‘~/tmp/scratch/Rtmpya5So9’   ‘~/tmp/scratch/RtmpygH8CO’ ‘~/tmp/scratch/RtmpzvF5y6’   ‘~/tmp/scratch/xvfb-run.0bD0JP’ ‘~/tmp/scratch/xvfb-run.1HVuAf’   ‘~/tmp/scratch/xvfb-run.1fQK3W’ ‘~/tmp/scratch/xvfb-run.3M3ooz’   ‘~/tmp/scratch/xvfb-run.4FoeLs’ ‘~/tmp/scratch/xvfb-run.56dVzO’   ‘~/tmp/scratch/xvfb-run.7aFL04’ ‘~/tmp/scratch/xvfb-run.8pwDwD’   ‘~/tmp/scratch/xvfb-run.A14kqv’ ‘~/tmp/scratch/xvfb-run.C0X4kt’   ‘~/tmp/scratch/xvfb-run.EfZfe6’ ‘~/tmp/scratch/xvfb-run.EzlW3h’   ‘~/tmp/scratch/xvfb-run.Fd8jHn’ ‘~/tmp/scratch/xvfb-run.GJ8ZoG’   ‘~/tmp/scratch/xvfb-run.IFpjJy’ ‘~/tmp/scratch/xvfb-run.KHQ6wG’   ‘~/tmp/scratch/xvfb-run.MqwnxY’ ‘~/tmp/scratch/xvfb-run.QaY7mB’   ‘~/tmp/scratch/xvfb-run.R8NtAr’ ‘~/tmp/scratch/xvfb-run.TFhxIx’   ‘~/tmp/scratch/xvfb-run.TQ95PX’ ‘~/tmp/scratch/xvfb-run.Urrphi’   ‘~/tmp/scratch/xvfb-run.WDvTYk’ ‘~/tmp/scratch/xvfb-run.WHJI0q’   ‘~/tmp/scratch/xvfb-run.Y14THT’ ‘~/tmp/scratch/xvfb-run.YWsScg’   ‘~/tmp/scratch/xvfb-run.aBmOjv’ ‘~/tmp/scratch/xvfb-run.atOR8t’   ‘~/tmp/scratch/xvfb-run.b6DVzR’ ‘~/tmp/scratch/xvfb-run.b6KPOT’   ‘~/tmp/scratch/xvfb-run.bHiJIp’ ‘~/tmp/scratch/xvfb-run.iaEMGR’   ‘~/tmp/scratch/xvfb-run.m803Bh’ ‘~/tmp/scratch/xvfb-run.mRLAuQ’   ‘~/tmp/scratch/xvfb-run.n0pDPC’ ‘~/tmp/scratch/xvfb-run.nCPKDY’   ‘~/tmp/scratch/xvfb-run.pHecYK’ ‘~/tmp/scratch/xvfb-run.rP8Yms’   ‘~/tmp/scratch/xvfb-run.rgBLeP’ ‘~/tmp/scratch/xvfb-run.sE917g’   ‘~/tmp/scratch/xvfb-run.v0NDit’ ‘~/tmp/scratch/xvfb-run.wXILf4’   ‘~/tmp/scratch/xvfb-run.x3flDt’ ‘~/tmp/scratch/xvfb-run.y63OFj’   ‘~/tmp/scratch/xvfb-run.yjKzuN’ ‘~/tmp/scratch/xvfb-run.zwM6SI’
• DONE

Status: 2 NOTEs