• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-11) 15.2.0     GNU Fortran (Debian 15.2.0-11) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘multilevelTools/DESCRIPTION’ ... OK
• this is package ‘multilevelTools’ version ‘0.2.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘multilevelTools’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [5s/6s] OK
• checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the package can be unloaded cleanly ... [4s/5s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
• checking loading without being on the library search path ... [5s/5s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [22s/25s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/7s] ERROR Running examples in ‘multilevelTools-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: evaluateLags > ### Title: Create lag variables and evaluate models with different number > ### of lags > ### Aliases: evaluateLags > > ### ** Examples > > ## these examples are slow to run > data(aces_daily, package = "JWileymisc") > > evaluateLags( + "NegAff ~ Female + Age + BornAUS + (1 | UserID)", + "STRESS", + 4L, + "UserID", + aces_daily) Error in `[.data.table`(data, , `:=`((lags), lapply(1:nlags, function(i) lagk(get(lagvar), :   attempt access index 19/19 in VECTOR_ELT Calls: evaluateLags -> [ -> [.data.table Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [6s/7s] ERROR   Running ‘testthat.R’ [6s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(multilevelTools)   > library(JWileymisc)   >   > test_check("multilevelTools")   Saving _problems/test-descriptives-2.R   Saving _problems/test-descriptives-19.R   [ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]      ══ Skipped tests (19) ══════════════════════════════════════════════════════════   • On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3',     'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3',     'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3',     'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3',     'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3',     'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3',     'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3',     'test-plotting.R:22:3', 'test-styler.R:2:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ──   Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT   Backtrace:       ▆    1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3    2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]    3. └─data.table:::`[.data.table`(...)   ── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ──   Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT   Backtrace:       ▆    1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3    2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]    3. └─data.table:::`[.data.table`(...)      [ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [6s/9s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘lmer-vignette.Rmd’ using rmarkdown Quitting from lmer-vignette.Rmd:178-191 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 3/3 in VECTOR_ELT --- Backtrace:     ▆  1. └─multilevelTools::meanDecompose(NegAff ~ UserID, data = aces_daily)  2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])]  3. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'lmer-vignette.Rmd' failed with diagnostics: attempt access index 3/3 in VECTOR_ELT --- failed re-building ‘lmer-vignette.Rmd’ SUMMARY: processing the following file failed:   ‘lmer-vignette.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 3 ERRORs