• using R Under development (unstable) (2025-12-04 r89100)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-9) 15.2.0     GNU Fortran (Debian 15.2.0-9) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘multcomp/DESCRIPTION’ ... OK
• this is package ‘multcomp’ version ‘1.4-29’
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... INFO Packages suggested but not available for checking:   'lme4', 'tram', 'fixest', 'glmmTMB', 'HH', 'gsDesign'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘multcomp’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [9s/9s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in shell scripts ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [9s/9s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [13s/13s] NOTE   Running ‘bugfix.R’ [2s/2s]   Comparing ‘bugfix.Rout’ to ‘bugfix.Rout.save’ ... OK   Running ‘regtest-Tukey.R’ [1s/1s]   Comparing ‘regtest-Tukey.Rout’ to ‘regtest-Tukey.Rout.save’ ... OK   Running ‘regtest-anova.R’ [1s/1s]   Comparing ‘regtest-anova.Rout’ to ‘regtest-anova.Rout.save’ ... OK   Running ‘regtest-fixest.R’ [1s/1s]   Running ‘regtest-interface-extended.R’ [1s/1s]   Comparing ‘regtest-interface-extended.Rout’ to ‘regtest-interface-extended.Rout.save’ ... OK   Running ‘regtest-interface.R’ [1s/1s]   Comparing ‘regtest-interface.Rout’ to ‘regtest-interface.Rout.save’ ... OK   Running ‘regtest-lme.R’ [1s/1s]   Comparing ‘regtest-lme.Rout’ to ‘regtest-lme.Rout.save’ ...18,20d17 < Warning message: < In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, : < there is no package called 'lme4' 44a42,66 > > General Linear Hypotheses > > Multiple Comparisons of Means: Tukey Contrasts > > > Linear Hypotheses: > Estimate > T2 - T1 == 0 3.8889 > T3 - T1 == 0 2.2222 > T4 - T1 == 0 0.6667 > T3 - T2 == 0 -1.6667 > T4 - T2 == 0 -3.2222 > T4 - T3 == 0 -1.5556 > > Global Test: > Chisq DF Pr(>Chisq) > 1 67.07 3 1.812e-14 > > Attaching package: 'nlme' > > The following object is masked from 'package:lme4': > > lmList >   Running ‘regtest-mmm.R’ [1s/1s]   Comparing ‘regtest-mmm.Rout’ to ‘regtest-mmm.Rout.save’ ... OK   Running ‘regtest-survival.R’ [1s/1s]   Comparing ‘regtest-survival.Rout’ to ‘regtest-survival.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [12s/12s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘chfls1.Rnw’ using Sweave Loading required package: mvtnorm Loading required package: survival Loading required package: TH.data Attaching package: ‘TH.data’ The following object is masked from ‘package:MASS’:     geyser Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps Warning in RET$pfunction("adjusted", ...) :   Completion with error > abseps --- finished re-building ‘chfls1.Rnw’ --- re-building ‘generalsiminf.Rnw’ using Sweave Loading required package: mvtnorm Loading required package: survival Loading required package: TH.data Loading required package: MASS Attaching package: ‘TH.data’ The following object is masked from ‘package:MASS’:     geyser Attaching package: ‘robustbase’ The following object is masked from ‘package:survival’:     heart Error: processing vignette 'generalsiminf.Rnw' failed with diagnostics:  chunk 2 (label = setup-2) Error in library("lme4") : there is no package called ‘lme4’ --- failed re-building ‘generalsiminf.Rnw’ SUMMARY: processing the following file failed:   ‘generalsiminf.Rnw’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/4s] OK
• checking HTML version of manual ... [2s/2s] NOTE Skipping checking math rendering: package 'V8' unavailable
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 2 NOTEs