- using R Under development (unstable) (2026-07-31 r90332)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-08-01 16:14:57 UTC
- checking for file ‘mmodely/DESCRIPTION’ ... OK
- this is package ‘mmodely’ version ‘0.2.5’
- checking CRAN incoming feasibility ... [1s/2s] NOTE
Maintainer: ‘David M Schruth <dschruth@anthropoidea.org>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("David", "M"),
family = "Schruth",
role = c("aut", "cre"),
email = "dschruth@anthropoidea.org")
as necessary.
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘mmodely’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/10s] OK
- checking Rd files ... [0s/1s] NOTE
checkRd: (-1) average.fit.models.Rd:6: Lost braces; missing escapes or markup?
6 | These function takes the output of pgls.iter and uses its list of objects { model fits, optimzations (e.g.AICc)} and performs a weighted average on the ctoefficients estimated in the former by weighting by the latter. The parameters can also optionally be converted to binary by specifying "binary=FALSE" or just running the alias wraper function for assessing evidence of variable importance (Burnham & Anderson 2000).
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [9s/15s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [29s/45s] OK
- checking PDF version of manual ... [4s/8s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0paHFk’ ‘~/tmp/scratch/Rtmp1XLg31’
‘~/tmp/scratch/Rtmp1YXJUy’ ‘~/tmp/scratch/Rtmp3U35q3’
‘~/tmp/scratch/Rtmp5CDLME’ ‘~/tmp/scratch/Rtmp5KUO73’
‘~/tmp/scratch/Rtmp6Of437’ ‘~/tmp/scratch/Rtmp6YzZYF’
‘~/tmp/scratch/Rtmp6tAhsq’ ‘~/tmp/scratch/Rtmp79PQQW’
‘~/tmp/scratch/Rtmp7DKugM’ ‘~/tmp/scratch/Rtmp7FgJS6’
‘~/tmp/scratch/Rtmp825f77’ ‘~/tmp/scratch/Rtmp8XHBqW’
‘~/tmp/scratch/Rtmp8klR3j’ ‘~/tmp/scratch/Rtmp9DqNs8’
‘~/tmp/scratch/Rtmp9tv5Mb’ ‘~/tmp/scratch/RtmpAVbUc3’
‘~/tmp/scratch/RtmpByku4w’ ‘~/tmp/scratch/RtmpCGvtns’
‘~/tmp/scratch/RtmpDMSsq3’ ‘~/tmp/scratch/RtmpDbgqUU’
‘~/tmp/scratch/RtmpDcdXhT’ ‘~/tmp/scratch/RtmpDnyuD8’
‘~/tmp/scratch/RtmpECuiNb’ ‘~/tmp/scratch/RtmpEu5F3Q’
‘~/tmp/scratch/RtmpF9X5ta’ ‘~/tmp/scratch/RtmpFYHCNn’
‘~/tmp/scratch/RtmpGZB2Ad’ ‘~/tmp/scratch/RtmpGj34C0’
‘~/tmp/scratch/RtmpHoj2xY’ ‘~/tmp/scratch/RtmpItwAxu’
‘~/tmp/scratch/RtmpIvF8L9’ ‘~/tmp/scratch/RtmpIxqOdJ’
‘~/tmp/scratch/RtmpJ0BNLi’ ‘~/tmp/scratch/RtmpJFVlYp’
‘~/tmp/scratch/RtmpJNbc8o’ ‘~/tmp/scratch/RtmpKL2kLN’
‘~/tmp/scratch/RtmpKzCcfI’ ‘~/tmp/scratch/RtmpMChtco’
‘~/tmp/scratch/RtmpN7znvh’ ‘~/tmp/scratch/RtmpNxSabl’
‘~/tmp/scratch/RtmpP5W9Me’ ‘~/tmp/scratch/RtmpPK8Hk0’
‘~/tmp/scratch/RtmpPtkwKg’ ‘~/tmp/scratch/RtmpQSshxr’
‘~/tmp/scratch/RtmpRosODX’ ‘~/tmp/scratch/RtmpSEYjFJ’
‘~/tmp/scratch/RtmpSWxrxR’ ‘~/tmp/scratch/RtmpUEbUAv’
‘~/tmp/scratch/RtmpUc1wdN’ ‘~/tmp/scratch/RtmpUi7oUN’
‘~/tmp/scratch/RtmpUzMAbv’ ‘~/tmp/scratch/RtmpVPc9pH’
‘~/tmp/scratch/RtmpVRPhXu’ ‘~/tmp/scratch/RtmpVzz8PW’
‘~/tmp/scratch/RtmpWARSbx’ ‘~/tmp/scratch/RtmpWcYXR6’
‘~/tmp/scratch/RtmpWf7ViF’ ‘~/tmp/scratch/RtmpXUm2AD’
‘~/tmp/scratch/RtmpXpOhYz’ ‘~/tmp/scratch/RtmpXzdVny’
‘~/tmp/scratch/RtmpYKhlOL’ ‘~/tmp/scratch/RtmpYLYPgN’
‘~/tmp/scratch/RtmpYXtqKB’ ‘~/tmp/scratch/RtmpZQs3ym’
‘~/tmp/scratch/RtmpZbD8BG’ ‘~/tmp/scratch/RtmpaPn4SP’
‘~/tmp/scratch/RtmpawIW8g’ ‘~/tmp/scratch/RtmpbrxJP2’
‘~/tmp/scratch/RtmpcOIz2Y’ ‘~/tmp/scratch/RtmpcmVlQB’
‘~/tmp/scratch/RtmpdlddIH’ ‘~/tmp/scratch/Rtmpe5SkJ3’
‘~/tmp/scratch/Rtmpe8JYHH’ ‘~/tmp/scratch/RtmpelJkAI’
‘~/tmp/scratch/RtmpfBxuOD’ ‘~/tmp/scratch/RtmpfSXGuP’
‘~/tmp/scratch/RtmpgL1oUh’ ‘~/tmp/scratch/RtmpgowcZG’
‘~/tmp/scratch/RtmphB52V9’ ‘~/tmp/scratch/RtmphQ4Zyd’
‘~/tmp/scratch/RtmphW4ywM’ ‘~/tmp/scratch/Rtmphdy5vx’
‘~/tmp/scratch/Rtmphu0Vcn’ ‘~/tmp/scratch/RtmpjVJ9Di’
‘~/tmp/scratch/RtmpjhEnQ0’ ‘~/tmp/scratch/RtmpjyjKMk’
‘~/tmp/scratch/RtmpkKQhZL’ ‘~/tmp/scratch/Rtmpkkt8sU’
‘~/tmp/scratch/RtmpljaR9i’ ‘~/tmp/scratch/RtmplwlFUK’
‘~/tmp/scratch/RtmpmAK38W’ ‘~/tmp/scratch/RtmpmK2tSG’
‘~/tmp/scratch/RtmpmZi6hC’ ‘~/tmp/scratch/RtmpmpeebF’
‘~/tmp/scratch/Rtmpn7dDGZ’ ‘~/tmp/scratch/RtmpnYbBO8’
‘~/tmp/scratch/RtmpoXXh99’ ‘~/tmp/scratch/Rtmpp0iKl7’
‘~/tmp/scratch/Rtmpp4CTMV’ ‘~/tmp/scratch/Rtmpp9WHGU’
‘~/tmp/scratch/RtmppFYGrC’ ‘~/tmp/scratch/Rtmppl5cNN’
‘~/tmp/scratch/Rtmpq3nIC1’ ‘~/tmp/scratch/Rtmpq6Uz55’
‘~/tmp/scratch/RtmpqNOpIJ’ ‘~/tmp/scratch/RtmpqQcXkB’
‘~/tmp/scratch/RtmpquwJ6W’ ‘~/tmp/scratch/RtmprARkyt’
‘~/tmp/scratch/RtmprFSD5v’ ‘~/tmp/scratch/RtmprzDnd1’
‘~/tmp/scratch/Rtmps113I1’ ‘~/tmp/scratch/RtmpsBPa8j’
‘~/tmp/scratch/RtmpsPcP2W’ ‘~/tmp/scratch/Rtmpt0atZ1’
‘~/tmp/scratch/RtmptAhOBF’ ‘~/tmp/scratch/RtmptVYd5D’
‘~/tmp/scratch/RtmptwlIpH’ ‘~/tmp/scratch/RtmpufIXJB’
‘~/tmp/scratch/Rtmpuh1tUY’ ‘~/tmp/scratch/RtmpuqSeT3’
‘~/tmp/scratch/RtmpvMsUnm’ ‘~/tmp/scratch/RtmpvUlEPw’
‘~/tmp/scratch/Rtmpw97sCF’ ‘~/tmp/scratch/RtmpwMwuo1’
‘~/tmp/scratch/RtmpwVwymE’ ‘~/tmp/scratch/Rtmpwa4o9n’
‘~/tmp/scratch/Rtmpx4bsnt’ ‘~/tmp/scratch/Rtmpx7iVvB’
‘~/tmp/scratch/RtmpyZcvgx’ ‘~/tmp/scratch/RtmpyoUYhE’
‘~/tmp/scratch/Rtmpz0Pn3J’ ‘~/tmp/scratch/Rtmpz7fuZc’
‘~/tmp/scratch/Rtmpztv6Vv’
‘~/tmp/scratch/quarto-session73665579984a5fff’
‘~/tmp/scratch/xvfb-run.0JDYck’ ‘~/tmp/scratch/xvfb-run.0PMUN4’
‘~/tmp/scratch/xvfb-run.0PtFij’ ‘~/tmp/scratch/xvfb-run.1QtdEp’
‘~/tmp/scratch/xvfb-run.3Owvzu’ ‘~/tmp/scratch/xvfb-run.4lHJcr’
‘~/tmp/scratch/xvfb-run.8IrWnH’ ‘~/tmp/scratch/xvfb-run.8RBZFY’
‘~/tmp/scratch/xvfb-run.AC7urD’ ‘~/tmp/scratch/xvfb-run.EjozTJ’
‘~/tmp/scratch/xvfb-run.Fp5OPL’ ‘~/tmp/scratch/xvfb-run.Gi9jt5’
‘~/tmp/scratch/xvfb-run.ISE9Ui’ ‘~/tmp/scratch/xvfb-run.L8VAi6’
‘~/tmp/scratch/xvfb-run.LAs52h’ ‘~/tmp/scratch/xvfb-run.MMmeh2’
‘~/tmp/scratch/xvfb-run.MlCRsr’ ‘~/tmp/scratch/xvfb-run.QPAGi3’
‘~/tmp/scratch/xvfb-run.RVIFNC’ ‘~/tmp/scratch/xvfb-run.StAdmf’
‘~/tmp/scratch/xvfb-run.UTpY7Q’ ‘~/tmp/scratch/xvfb-run.Ucldu2’
‘~/tmp/scratch/xvfb-run.UrMSsK’ ‘~/tmp/scratch/xvfb-run.VNUj4O’
‘~/tmp/scratch/xvfb-run.VYodHQ’ ‘~/tmp/scratch/xvfb-run.XBa1Ug’
‘~/tmp/scratch/xvfb-run.XpZyix’ ‘~/tmp/scratch/xvfb-run.bOrtHr’
‘~/tmp/scratch/xvfb-run.eGQZio’ ‘~/tmp/scratch/xvfb-run.gFJdr6’
‘~/tmp/scratch/xvfb-run.hsn99K’ ‘~/tmp/scratch/xvfb-run.jKwyva’
‘~/tmp/scratch/xvfb-run.kVELAe’ ‘~/tmp/scratch/xvfb-run.kdJibc’
‘~/tmp/scratch/xvfb-run.nt0es6’ ‘~/tmp/scratch/xvfb-run.odzgRR’
‘~/tmp/scratch/xvfb-run.pigJGi’ ‘~/tmp/scratch/xvfb-run.qm53Sc’
‘~/tmp/scratch/xvfb-run.rpi3EC’ ‘~/tmp/scratch/xvfb-run.uCHY0O’
‘~/tmp/scratch/xvfb-run.vyjd5z’ ‘~/tmp/scratch/xvfb-run.wwU1F7’
‘~/tmp/scratch/xvfb-run.xIF9J4’ ‘~/tmp/scratch/xvfb-run.z18R3X’
‘~/tmp/scratch/xvfb-run.zBxVkC’
- DONE
Status: 3 NOTEs