- using R Under development (unstable) (2025-09-15 r88837)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-3) 15.2.0
GNU Fortran (Debian 15.2.0-3) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘mlr3learners/DESCRIPTION’ ... OK
- this is package ‘mlr3learners’ version ‘0.12.0’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘mlr3learners’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking whether startup messages can be suppressed ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [16s/23s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [7s/11s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [72s/427s] ERROR
Running ‘testthat.R’ [72s/426s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3learners")
+ test_check("mlr3learners")
+ }
Loading required package: mlr3
WARN [17:04:15.085] [mlr3] train: one multinomial or binomial class has fewer than 8 observations; dangerous ground
WARN [17:04:23.038] [mlr3] train: one multinomial or binomial class has fewer than 8 observations; dangerous ground
WARN [17:04:28.004] [mlr3] train: one multinomial or binomial class has fewer than 8 observations; dangerous ground
WARN [17:04:32.040] [mlr3] train: one multinomial or binomial class has fewer than 8 observations; dangerous ground
ERROR [17:06:37.660] [mlr3] train: rank deficiency in group A
WARN [17:07:50.991] [mlr3] train: Option grouped=FALSE enforced in cv.glmnet, since < 3 observations per fold
WARN [17:07:57.302] [mlr3] train: Option grouped=FALSE enforced in cv.glmnet, since < 3 observations per fold
WARN [17:09:21.173] [mlr3] predict: Sample size <=20, no calibration performed.
WARN [17:09:21.180] [mlr3] predict: NaNs produced
WARN [17:09:26.609] [mlr3] predict: Sample size <=20, no calibration performed.
WARN [17:09:26.611] [mlr3] predict: NaNs produced
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 548 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (4): 'test_classif_nnet.R:2:1', 'test_classif_xgboost.R:2:1',
'test_regr_nnet.R:2:1', 'test_regr_xgboost.R:2:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_classif_qda.R:7:3'): autotest ────────────────────────────────
`result` is not TRUE
`actual` is a list
`expected` is a logical vector (TRUE)
[encapsulation] learner 'classif.qda:prob' on task 'feat_all_multiclass' failed: resample log has errors: rank deficiency in group A
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 548 ]
Error: Test failures
Execution halted
- checking PDF version of manual ... [8s/9s] OK
- checking HTML version of manual ... [3s/5s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR