• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 16:06:34 UTC
• checking for file ‘mhsmm/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘mhsmm’ version ‘0.4.21’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Jared O'Connell <jaredoconnell@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Jared",                       family = "O'Connell",                       role = c("aut", "cre"),                       email = "jaredoconnell@gmail.com"),                person(given = "Søren",                       family = "Højsgaard",                       role = "aut",                       email = "sorenh@math.aau.dk")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘mhsmm’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/8s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/6s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [5s/9s] OK
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp05cbUD’ ‘~/tmp/scratch/Rtmp0APPRw’   ‘~/tmp/scratch/Rtmp0kqcpN’ ‘~/tmp/scratch/Rtmp1DXAGE’   ‘~/tmp/scratch/Rtmp2LGAjX’ ‘~/tmp/scratch/Rtmp2jObJF’   ‘~/tmp/scratch/Rtmp3WeBAI’ ‘~/tmp/scratch/Rtmp5Nap7M’   ‘~/tmp/scratch/Rtmp5Pi8US’ ‘~/tmp/scratch/Rtmp5kfMoD’   ‘~/tmp/scratch/Rtmp669ZFY’ ‘~/tmp/scratch/Rtmp7FH4kJ’   ‘~/tmp/scratch/Rtmp7jKpDk’ ‘~/tmp/scratch/Rtmp7mXfu1’   ‘~/tmp/scratch/Rtmp84yaZ9’ ‘~/tmp/scratch/Rtmp88EujV’   ‘~/tmp/scratch/Rtmp8hgvKn’ ‘~/tmp/scratch/Rtmp9eL7Wu’   ‘~/tmp/scratch/RtmpA7WKbS’ ‘~/tmp/scratch/RtmpAsvq1W’   ‘~/tmp/scratch/RtmpB90N8S’ ‘~/tmp/scratch/RtmpBLOfU3’   ‘~/tmp/scratch/RtmpBSmR4F’ ‘~/tmp/scratch/RtmpBi9eEd’   ‘~/tmp/scratch/RtmpBk7EZv’ ‘~/tmp/scratch/RtmpC3Pzer’   ‘~/tmp/scratch/RtmpChSe0w’ ‘~/tmp/scratch/RtmpCx2ZNq’   ‘~/tmp/scratch/RtmpDrAt7W’ ‘~/tmp/scratch/RtmpEFetjZ’   ‘~/tmp/scratch/RtmpFMb14u’ ‘~/tmp/scratch/RtmpG1mWW3’   ‘~/tmp/scratch/RtmpGMn9N3’ ‘~/tmp/scratch/RtmpGRcX0X’   ‘~/tmp/scratch/RtmpGgcLA6’ ‘~/tmp/scratch/RtmpHutlpA’   ‘~/tmp/scratch/RtmpIJbu36’ ‘~/tmp/scratch/RtmpIxFJBl’   ‘~/tmp/scratch/RtmpIyuYMR’ ‘~/tmp/scratch/RtmpJg9bBg’   ‘~/tmp/scratch/RtmpJq4JTa’ ‘~/tmp/scratch/RtmpJrZiJp’   ‘~/tmp/scratch/RtmpKFd8s6’ ‘~/tmp/scratch/RtmpKPdrh1’   ‘~/tmp/scratch/RtmpKRRMST’ ‘~/tmp/scratch/RtmpLvE55p’   ‘~/tmp/scratch/RtmpMb42CI’ ‘~/tmp/scratch/RtmpMpNPsc’   ‘~/tmp/scratch/RtmpN0v4UZ’ ‘~/tmp/scratch/RtmpNOmTV1’   ‘~/tmp/scratch/RtmpNnN0aC’ ‘~/tmp/scratch/RtmpOXGTGR’   ‘~/tmp/scratch/RtmpPjdND7’ ‘~/tmp/scratch/RtmpPpi2QT’   ‘~/tmp/scratch/RtmpQTJY8y’ ‘~/tmp/scratch/RtmpQeVTBz’   ‘~/tmp/scratch/RtmpR20TNu’ ‘~/tmp/scratch/RtmpRRBYPg’   ‘~/tmp/scratch/RtmpRrYVjQ’ ‘~/tmp/scratch/RtmpSTzwoH’   ‘~/tmp/scratch/RtmpSxIvJ7’ ‘~/tmp/scratch/RtmpT9yd8g’   ‘~/tmp/scratch/RtmpTcPtWd’ ‘~/tmp/scratch/RtmpUO93bu’   ‘~/tmp/scratch/RtmpV8ETwz’ ‘~/tmp/scratch/RtmpVImh2A’   ‘~/tmp/scratch/RtmpVcyCik’ ‘~/tmp/scratch/RtmpW5rNGZ’   ‘~/tmp/scratch/RtmpWBKKvw’ ‘~/tmp/scratch/RtmpWcpmzf’   ‘~/tmp/scratch/RtmpXB7W7u’ ‘~/tmp/scratch/RtmpXNJRkZ’   ‘~/tmp/scratch/RtmpXPiwNb’ ‘~/tmp/scratch/RtmpXnQvyo’   ‘~/tmp/scratch/RtmpYpIuPR’ ‘~/tmp/scratch/RtmpYzTFyV’   ‘~/tmp/scratch/RtmpZLbmMQ’ ‘~/tmp/scratch/Rtmpafj3k6’   ‘~/tmp/scratch/RtmpbHsEGU’ ‘~/tmp/scratch/RtmpbR1tLl’   ‘~/tmp/scratch/RtmpbRqORm’ ‘~/tmp/scratch/Rtmpbfvmsx’   ‘~/tmp/scratch/RtmpcVub8O’ ‘~/tmp/scratch/Rtmpdo6dtR’   ‘~/tmp/scratch/Rtmpe5E5zi’ ‘~/tmp/scratch/RtmpeGFj7M’   ‘~/tmp/scratch/RtmpeTFgjm’ ‘~/tmp/scratch/RtmpepT5ik’   ‘~/tmp/scratch/RtmpfF98WP’ ‘~/tmp/scratch/RtmpfLXUKl’   ‘~/tmp/scratch/RtmpfjJnkL’ ‘~/tmp/scratch/Rtmpfky738’   ‘~/tmp/scratch/RtmphCQl5F’ ‘~/tmp/scratch/RtmphYoVTT’   ‘~/tmp/scratch/Rtmpk1JIU1’ ‘~/tmp/scratch/Rtmpk5r2Ry’   ‘~/tmp/scratch/RtmpkKCINQ’ ‘~/tmp/scratch/Rtmpl18C9O’   ‘~/tmp/scratch/RtmpmKzsup’ ‘~/tmp/scratch/RtmpmYHgOL’   ‘~/tmp/scratch/RtmpmvWcXH’ ‘~/tmp/scratch/Rtmpmxd3CA’   ‘~/tmp/scratch/Rtmpn6GLWf’ ‘~/tmp/scratch/RtmpnCNrhV’   ‘~/tmp/scratch/RtmpnHbYQ9’ ‘~/tmp/scratch/RtmpnQJJ3H’   ‘~/tmp/scratch/RtmpnrBz4e’ ‘~/tmp/scratch/RtmpnzRfkk’   ‘~/tmp/scratch/RtmpoYlYP6’ ‘~/tmp/scratch/RtmpqDiDs3’   ‘~/tmp/scratch/Rtmpr0plxI’ ‘~/tmp/scratch/RtmprIZq2L’   ‘~/tmp/scratch/RtmprTLlqK’ ‘~/tmp/scratch/RtmprdDSQv’   ‘~/tmp/scratch/Rtmprl7aqQ’ ‘~/tmp/scratch/RtmpsKd3u1’   ‘~/tmp/scratch/RtmpspDWNY’ ‘~/tmp/scratch/Rtmpto1x6e’   ‘~/tmp/scratch/RtmpuVbFTL’ ‘~/tmp/scratch/RtmpumNoH4’   ‘~/tmp/scratch/Rtmpv0ACwq’ ‘~/tmp/scratch/RtmpwbdkSs’   ‘~/tmp/scratch/Rtmpx39msI’ ‘~/tmp/scratch/RtmpxNXBlC’   ‘~/tmp/scratch/RtmpxitXMV’ ‘~/tmp/scratch/RtmpyZNxYr’   ‘~/tmp/scratch/RtmpzH1mAs’ ‘~/tmp/scratch/RtmpzIcxZc’   ‘~/tmp/scratch/ccCAJUjR.s’ ‘~/tmp/scratch/xvfb-run.34TLNz’   ‘~/tmp/scratch/xvfb-run.4xYeOp’ ‘~/tmp/scratch/xvfb-run.6bXB54’   ‘~/tmp/scratch/xvfb-run.78j0GL’ ‘~/tmp/scratch/xvfb-run.7NWE4S’   ‘~/tmp/scratch/xvfb-run.7zpYSe’ ‘~/tmp/scratch/xvfb-run.A24Isx’   ‘~/tmp/scratch/xvfb-run.AB7apI’ ‘~/tmp/scratch/xvfb-run.CD9o0U’   ‘~/tmp/scratch/xvfb-run.D2lrBw’ ‘~/tmp/scratch/xvfb-run.GLmF9Q’   ‘~/tmp/scratch/xvfb-run.Icf3xq’ ‘~/tmp/scratch/xvfb-run.LCBAOT’   ‘~/tmp/scratch/xvfb-run.LokwOl’ ‘~/tmp/scratch/xvfb-run.Lve17I’   ‘~/tmp/scratch/xvfb-run.OhEHZ2’ ‘~/tmp/scratch/xvfb-run.PJy5IU’   ‘~/tmp/scratch/xvfb-run.Rnuelh’ ‘~/tmp/scratch/xvfb-run.TOYgOR’   ‘~/tmp/scratch/xvfb-run.UQ5nGD’ ‘~/tmp/scratch/xvfb-run.ao0fPq’   ‘~/tmp/scratch/xvfb-run.dgSAOJ’ ‘~/tmp/scratch/xvfb-run.g5fHiy’   ‘~/tmp/scratch/xvfb-run.gdfa5k’ ‘~/tmp/scratch/xvfb-run.gw8SC4’   ‘~/tmp/scratch/xvfb-run.hm0Jti’ ‘~/tmp/scratch/xvfb-run.k6aZTr’   ‘~/tmp/scratch/xvfb-run.l8E6Dp’ ‘~/tmp/scratch/xvfb-run.nBwsqC’   ‘~/tmp/scratch/xvfb-run.nsc4W9’ ‘~/tmp/scratch/xvfb-run.oK3CoC’   ‘~/tmp/scratch/xvfb-run.ocmhK2’ ‘~/tmp/scratch/xvfb-run.pgOcpf’   ‘~/tmp/scratch/xvfb-run.ql5Qhy’ ‘~/tmp/scratch/xvfb-run.qqzfyc’   ‘~/tmp/scratch/xvfb-run.sdw93D’ ‘~/tmp/scratch/xvfb-run.vmOplP’
• DONE

Status: 2 NOTEs