• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 16:06:37 UTC
• checking for file ‘mgcv/DESCRIPTION’ ... OK
• this is package ‘mgcv’ version ‘1.9-4’
• checking CRAN incoming feasibility ... [3s/4s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘mgcv’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking whether startup messages can be suppressed ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [118s/146s] OK
• checking Rd files ... [2s/3s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [86s/111s] OK Examples with CPU (user + system) or elapsed time > 5s        user system elapsed shash 3.597 0.034 5.832
• checking PDF version of manual ... [14s/20s] OK
• checking HTML version of manual ... [8s/11s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp01Q48Q’ ‘~/tmp/scratch/Rtmp1BRfeH’   ‘~/tmp/scratch/Rtmp26gouV’ ‘~/tmp/scratch/Rtmp2A23Ts’   ‘~/tmp/scratch/Rtmp2ar3eK’ ‘~/tmp/scratch/Rtmp2dChjU’   ‘~/tmp/scratch/Rtmp2fc1J0’ ‘~/tmp/scratch/Rtmp36bTWL’   ‘~/tmp/scratch/Rtmp3DGQqI’ ‘~/tmp/scratch/Rtmp42wDqS’   ‘~/tmp/scratch/Rtmp4ZEUyn’ ‘~/tmp/scratch/Rtmp4ezpAw’   ‘~/tmp/scratch/Rtmp4iFOfV’ ‘~/tmp/scratch/Rtmp65NkEl’   ‘~/tmp/scratch/Rtmp6qVGmT’ ‘~/tmp/scratch/Rtmp7Jc0Qq’   ‘~/tmp/scratch/Rtmp7TbIdB’ ‘~/tmp/scratch/Rtmp8M9v1T’   ‘~/tmp/scratch/Rtmp8dJchF’ ‘~/tmp/scratch/Rtmp8kHktM’   ‘~/tmp/scratch/Rtmp9HDoMi’ ‘~/tmp/scratch/Rtmp9KjBjb’   ‘~/tmp/scratch/Rtmp9KxcwB’ ‘~/tmp/scratch/Rtmp9R70s7’   ‘~/tmp/scratch/Rtmp9SbE9I’ ‘~/tmp/scratch/Rtmp9fhqrm’   ‘~/tmp/scratch/RtmpACblIA’ ‘~/tmp/scratch/RtmpAbpLRf’   ‘~/tmp/scratch/RtmpAfWbIY’ ‘~/tmp/scratch/RtmpAxWpjk’   ‘~/tmp/scratch/RtmpB5oZUM’ ‘~/tmp/scratch/RtmpB7UCut’   ‘~/tmp/scratch/RtmpC2y66j’ ‘~/tmp/scratch/RtmpC8pb4d’   ‘~/tmp/scratch/RtmpCEWpGj’ ‘~/tmp/scratch/RtmpCrG1Q0’   ‘~/tmp/scratch/RtmpD1ST7p’ ‘~/tmp/scratch/RtmpDLymJX’   ‘~/tmp/scratch/RtmpDVVBQW’ ‘~/tmp/scratch/RtmpDs2NKB’   ‘~/tmp/scratch/RtmpERKQdz’ ‘~/tmp/scratch/RtmpERvawp’   ‘~/tmp/scratch/RtmpEVD1Gn’ ‘~/tmp/scratch/RtmpEnm7cO’   ‘~/tmp/scratch/RtmpFKgIxS’ ‘~/tmp/scratch/RtmpG2TSrW’   ‘~/tmp/scratch/RtmpGZtE7d’ ‘~/tmp/scratch/RtmpGa3T2C’   ‘~/tmp/scratch/RtmpGoFQ5i’ ‘~/tmp/scratch/RtmpH5HNeT’   ‘~/tmp/scratch/RtmpH7oy2X’ ‘~/tmp/scratch/RtmpHGRiEq’   ‘~/tmp/scratch/RtmpHIyg2u’ ‘~/tmp/scratch/RtmpHo5WD1’   ‘~/tmp/scratch/RtmpIODTYT’ ‘~/tmp/scratch/RtmpJGsa3b’   ‘~/tmp/scratch/RtmpJSfNh6’ ‘~/tmp/scratch/RtmpJkvBm7’   ‘~/tmp/scratch/RtmpKS7qbT’ ‘~/tmp/scratch/RtmpKkwojS’   ‘~/tmp/scratch/RtmpL7Zqx7’ ‘~/tmp/scratch/RtmpLMMH1h’   ‘~/tmp/scratch/RtmpLNGHJW’ ‘~/tmp/scratch/RtmpLap2ad’   ‘~/tmp/scratch/RtmpMBf4Nq’ ‘~/tmp/scratch/RtmpMouhmW’   ‘~/tmp/scratch/RtmpMzXduP’ ‘~/tmp/scratch/RtmpN5bmxj’   ‘~/tmp/scratch/RtmpN8zEZC’ ‘~/tmp/scratch/RtmpNBa9ls’   ‘~/tmp/scratch/RtmpNZue0A’ ‘~/tmp/scratch/RtmpNuh39f’   ‘~/tmp/scratch/RtmpOM6f6q’ ‘~/tmp/scratch/RtmpOlq9YL’   ‘~/tmp/scratch/RtmpOtgnUH’ ‘~/tmp/scratch/RtmpP0VV4q’   ‘~/tmp/scratch/RtmpPCGrKB’ ‘~/tmp/scratch/RtmpPSyJ7r’   ‘~/tmp/scratch/RtmpQGqk55’ ‘~/tmp/scratch/RtmpROEJqI’   ‘~/tmp/scratch/RtmpRWyBwN’ ‘~/tmp/scratch/RtmpRbSndn’   ‘~/tmp/scratch/RtmpSDcgDJ’ ‘~/tmp/scratch/RtmpTPfOlP’   ‘~/tmp/scratch/RtmpTdqebu’ ‘~/tmp/scratch/RtmpTnSZ9H’   ‘~/tmp/scratch/RtmpUgdAWT’ ‘~/tmp/scratch/RtmpUi0no9’   ‘~/tmp/scratch/RtmpUzchlp’ ‘~/tmp/scratch/RtmpVPVeNP’   ‘~/tmp/scratch/RtmpVkqdqi’ ‘~/tmp/scratch/RtmpWZtwiF’   ‘~/tmp/scratch/RtmpWrp150’ ‘~/tmp/scratch/RtmpWufXnJ’   ‘~/tmp/scratch/RtmpXmK6ee’ ‘~/tmp/scratch/RtmpYSNVqj’   ‘~/tmp/scratch/RtmpYcT9Jo’ ‘~/tmp/scratch/RtmpYpee4n’   ‘~/tmp/scratch/RtmpYrPUGS’ ‘~/tmp/scratch/RtmpYwLWd5’   ‘~/tmp/scratch/RtmpZ36XEC’ ‘~/tmp/scratch/RtmpZE8nm6’   ‘~/tmp/scratch/RtmpZNNhBy’ ‘~/tmp/scratch/Rtmpa4fqXE’   ‘~/tmp/scratch/Rtmpaaplvl’ ‘~/tmp/scratch/RtmpahGnOg’   ‘~/tmp/scratch/Rtmpbj28tZ’ ‘~/tmp/scratch/Rtmpbox5DV’   ‘~/tmp/scratch/Rtmpc8HPad’ ‘~/tmp/scratch/RtmpcRDWDi’   ‘~/tmp/scratch/Rtmpca4h2q’ ‘~/tmp/scratch/Rtmpe5Nght’   ‘~/tmp/scratch/RtmpeWQWTU’ ‘~/tmp/scratch/RtmpepCWSJ’   ‘~/tmp/scratch/Rtmpf5SIF0’ ‘~/tmp/scratch/Rtmpfj5jJB’   ‘~/tmp/scratch/RtmpgGvb8u’ ‘~/tmp/scratch/RtmpgRHPLt’   ‘~/tmp/scratch/RtmpgZw6XB’ ‘~/tmp/scratch/RtmpghXHTI’   ‘~/tmp/scratch/RtmpgznZ4J’ ‘~/tmp/scratch/RtmpiM6jh0’   ‘~/tmp/scratch/RtmpiitetO’ ‘~/tmp/scratch/Rtmpio3VyS’   ‘~/tmp/scratch/Rtmpj1VXKj’ ‘~/tmp/scratch/Rtmpj2QJUb’   ‘~/tmp/scratch/RtmpjM84PS’ ‘~/tmp/scratch/RtmpjhhD4J’   ‘~/tmp/scratch/RtmpkBgXBs’ ‘~/tmp/scratch/RtmpkTh8om’   ‘~/tmp/scratch/RtmpkVW4lt’ ‘~/tmp/scratch/RtmpkdpgZ5’   ‘~/tmp/scratch/RtmpkohDQk’ ‘~/tmp/scratch/Rtmpl7D1sc’   ‘~/tmp/scratch/RtmplSJp7p’ ‘~/tmp/scratch/RtmplUMHvd’   ‘~/tmp/scratch/RtmpmU67Cg’ ‘~/tmp/scratch/Rtmpmab5Xg’   ‘~/tmp/scratch/RtmpmfA0Tk’ ‘~/tmp/scratch/Rtmpn6Bjak’   ‘~/tmp/scratch/RtmpnT7fcC’ ‘~/tmp/scratch/RtmpnkeM98’   ‘~/tmp/scratch/RtmpoF0lmQ’ ‘~/tmp/scratch/RtmpoLn4Kp’   ‘~/tmp/scratch/Rtmpojzc5E’ ‘~/tmp/scratch/RtmpopClbX’   ‘~/tmp/scratch/RtmppayY85’ ‘~/tmp/scratch/RtmpqGcoqC’   ‘~/tmp/scratch/RtmpqL9G9G’ ‘~/tmp/scratch/RtmprkfhZS’   ‘~/tmp/scratch/Rtmps1skF6’ ‘~/tmp/scratch/RtmpsSISVf’   ‘~/tmp/scratch/Rtmpsb2Ux4’ ‘~/tmp/scratch/RtmpszeWaA’   ‘~/tmp/scratch/RtmptDLJOH’ ‘~/tmp/scratch/RtmptYzb2O’   ‘~/tmp/scratch/Rtmpu5GCIc’ ‘~/tmp/scratch/RtmpuDn8wD’   ‘~/tmp/scratch/RtmpumLwZM’ ‘~/tmp/scratch/RtmpuncNLQ’   ‘~/tmp/scratch/Rtmpw6pRaY’ ‘~/tmp/scratch/Rtmpw7KpSr’   ‘~/tmp/scratch/RtmpwIVE0I’ ‘~/tmp/scratch/RtmpwJX9TK’   ‘~/tmp/scratch/RtmpwQG44S’ ‘~/tmp/scratch/RtmpwfVccX’   ‘~/tmp/scratch/Rtmpwgj14K’ ‘~/tmp/scratch/RtmpxIHot9’   ‘~/tmp/scratch/RtmpxMsnX7’ ‘~/tmp/scratch/RtmpxwVvgF’   ‘~/tmp/scratch/Rtmpy1krmC’ ‘~/tmp/scratch/RtmpyU7Ok3’   ‘~/tmp/scratch/RtmpyxbpV2’ ‘~/tmp/scratch/RtmpzLG5Xq’   ‘~/tmp/scratch/RtmpzOGCxf’ ‘~/tmp/scratch/RtmpziLspe’   ‘~/tmp/scratch/RtmpziS0XX’   ‘~/tmp/scratch/quarto-session782e09290cb7308d’   ‘~/tmp/scratch/xvfb-run.0AKpgx’ ‘~/tmp/scratch/xvfb-run.11uQXQ’   ‘~/tmp/scratch/xvfb-run.12uLxT’ ‘~/tmp/scratch/xvfb-run.1rCk1i’   ‘~/tmp/scratch/xvfb-run.2csILx’ ‘~/tmp/scratch/xvfb-run.33WXQR’   ‘~/tmp/scratch/xvfb-run.3AOCph’ ‘~/tmp/scratch/xvfb-run.3XoyMw’   ‘~/tmp/scratch/xvfb-run.44lXUC’ ‘~/tmp/scratch/xvfb-run.5w1xNH’   ‘~/tmp/scratch/xvfb-run.65wVjs’ ‘~/tmp/scratch/xvfb-run.6M9oQw’   ‘~/tmp/scratch/xvfb-run.6qPT9L’ ‘~/tmp/scratch/xvfb-run.9QjBaa’   ‘~/tmp/scratch/xvfb-run.A5yufx’ ‘~/tmp/scratch/xvfb-run.BnWmin’   ‘~/tmp/scratch/xvfb-run.CfMljj’ ‘~/tmp/scratch/xvfb-run.CuY689’   ‘~/tmp/scratch/xvfb-run.DBa6Ud’ ‘~/tmp/scratch/xvfb-run.DQDv24’   ‘~/tmp/scratch/xvfb-run.DgUPer’ ‘~/tmp/scratch/xvfb-run.E2BfC8’   ‘~/tmp/scratch/xvfb-run.G9kCKM’ ‘~/tmp/scratch/xvfb-run.Gf3wNr’   ‘~/tmp/scratch/xvfb-run.JjCbC8’ ‘~/tmp/scratch/xvfb-run.Jlb4X9’   ‘~/tmp/scratch/xvfb-run.LD0pea’ ‘~/tmp/scratch/xvfb-run.LF7Avz’   ‘~/tmp/scratch/xvfb-run.LQgOsg’ ‘~/tmp/scratch/xvfb-run.LuoHRg’   ‘~/tmp/scratch/xvfb-run.NVzhh0’ ‘~/tmp/scratch/xvfb-run.NpAF4o’   ‘~/tmp/scratch/xvfb-run.NwMTkf’ ‘~/tmp/scratch/xvfb-run.NxaHUz’   ‘~/tmp/scratch/xvfb-run.Onwy5n’ ‘~/tmp/scratch/xvfb-run.P5acn4’   ‘~/tmp/scratch/xvfb-run.POnGA9’ ‘~/tmp/scratch/xvfb-run.PpDoxL’   ‘~/tmp/scratch/xvfb-run.Qpojat’ ‘~/tmp/scratch/xvfb-run.RwUZ6B’   ‘~/tmp/scratch/xvfb-run.T5DeF0’ ‘~/tmp/scratch/xvfb-run.TM49up’   ‘~/tmp/scratch/xvfb-run.TvcSWz’ ‘~/tmp/scratch/xvfb-run.Tzsbpj’   ‘~/tmp/scratch/xvfb-run.VB5jP0’ ‘~/tmp/scratch/xvfb-run.WE9TOp’   ‘~/tmp/scratch/xvfb-run.XS4PeM’ ‘~/tmp/scratch/xvfb-run.XZ1G8C’   ‘~/tmp/scratch/xvfb-run.YUVuq3’ ‘~/tmp/scratch/xvfb-run.YhnIK2’   ‘~/tmp/scratch/xvfb-run.aO0pV6’ ‘~/tmp/scratch/xvfb-run.dLusbn’   ‘~/tmp/scratch/xvfb-run.e52ux8’ ‘~/tmp/scratch/xvfb-run.eEsMrs’   ‘~/tmp/scratch/xvfb-run.enrnJS’ ‘~/tmp/scratch/xvfb-run.fIApoA’   ‘~/tmp/scratch/xvfb-run.ggYLQ6’ ‘~/tmp/scratch/xvfb-run.hlZ1G2’   ‘~/tmp/scratch/xvfb-run.ivvtup’ ‘~/tmp/scratch/xvfb-run.lWO3hu’   ‘~/tmp/scratch/xvfb-run.lhMc2S’ ‘~/tmp/scratch/xvfb-run.mBbtcw’   ‘~/tmp/scratch/xvfb-run.mXwLYZ’ ‘~/tmp/scratch/xvfb-run.nObING’   ‘~/tmp/scratch/xvfb-run.nRekDa’ ‘~/tmp/scratch/xvfb-run.p0qVeX’   ‘~/tmp/scratch/xvfb-run.pzI9AN’ ‘~/tmp/scratch/xvfb-run.qq8AEl’   ‘~/tmp/scratch/xvfb-run.rW44GF’ ‘~/tmp/scratch/xvfb-run.sGafpa’   ‘~/tmp/scratch/xvfb-run.smic1Y’ ‘~/tmp/scratch/xvfb-run.tkDUz1’   ‘~/tmp/scratch/xvfb-run.tzyNDu’ ‘~/tmp/scratch/xvfb-run.uQ0eSn’   ‘~/tmp/scratch/xvfb-run.vCaluF’ ‘~/tmp/scratch/xvfb-run.xHleOM’   ‘~/tmp/scratch/xvfb-run.xhg4Ho’ ‘~/tmp/scratch/xvfb-run.y6jDxV’   ‘~/tmp/scratch/xvfb-run.yEgeWV’
• DONE

Status: 1 NOTE