• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 16:02:43 UTC
• checking for file ‘mediation/DESCRIPTION’ ... OK
• this is package ‘mediation’ version ‘4.5.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] NOTE Maintainer: ‘Teppei Yamamoto <tyamam@waseda.jp>’ Found the following (possibly) invalid file URI:   URI: dtingley@gov.harvard.edu     From: inst/doc/mediation-old.pdf
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘mediation’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/3s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking whether startup messages can be suppressed ... [3s/4s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [30s/33s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [13s/15s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [3s/4s] OK   Running ‘testthat.R’ [3s/3s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [63s/73s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0FcC0z’ ‘~/tmp/scratch/Rtmp0Twi73’   ‘~/tmp/scratch/Rtmp0eAePP’ ‘~/tmp/scratch/Rtmp0qnVN1’   ‘~/tmp/scratch/Rtmp1zpa3f’ ‘~/tmp/scratch/Rtmp2as12L’   ‘~/tmp/scratch/Rtmp2dhjk7’ ‘~/tmp/scratch/Rtmp2upvDK’   ‘~/tmp/scratch/Rtmp34hmbO’ ‘~/tmp/scratch/Rtmp3S0Kks’   ‘~/tmp/scratch/Rtmp3aI15C’ ‘~/tmp/scratch/Rtmp4ES85p’   ‘~/tmp/scratch/Rtmp4X37so’ ‘~/tmp/scratch/Rtmp5K4jt6’   ‘~/tmp/scratch/Rtmp5YpZI3’ ‘~/tmp/scratch/Rtmp5tARz4’   ‘~/tmp/scratch/Rtmp6lnm4T’ ‘~/tmp/scratch/Rtmp6yqtJ5’   ‘~/tmp/scratch/Rtmp7FdMKU’ ‘~/tmp/scratch/Rtmp7JkPOI’   ‘~/tmp/scratch/Rtmp7iNH7J’ ‘~/tmp/scratch/Rtmp8skYTJ’   ‘~/tmp/scratch/RtmpA3Y3vp’ ‘~/tmp/scratch/RtmpA8vFxN’   ‘~/tmp/scratch/RtmpAJ6PkX’ ‘~/tmp/scratch/RtmpAVLH1l’   ‘~/tmp/scratch/RtmpAb0ho7’ ‘~/tmp/scratch/RtmpB4vsxB’   ‘~/tmp/scratch/RtmpC18BzH’ ‘~/tmp/scratch/RtmpDI05Bs’   ‘~/tmp/scratch/RtmpDg0fim’ ‘~/tmp/scratch/RtmpEnRXLb’   ‘~/tmp/scratch/RtmpFeGeLW’ ‘~/tmp/scratch/RtmpG16KfQ’   ‘~/tmp/scratch/RtmpGaFuwi’ ‘~/tmp/scratch/RtmpGnPUDs’   ‘~/tmp/scratch/RtmpHMDRsk’ ‘~/tmp/scratch/RtmpHu0RNH’   ‘~/tmp/scratch/RtmpIKo0we’ ‘~/tmp/scratch/RtmpIPmfwA’   ‘~/tmp/scratch/RtmpIQM2My’ ‘~/tmp/scratch/RtmpITq4Zk’   ‘~/tmp/scratch/RtmpJNiTtV’ ‘~/tmp/scratch/RtmpJXgR7s’   ‘~/tmp/scratch/RtmpJYBRBG’ ‘~/tmp/scratch/RtmpKLfeCY’   ‘~/tmp/scratch/RtmpL0WPZv’ ‘~/tmp/scratch/RtmpLZDdXt’   ‘~/tmp/scratch/RtmpLsix4a’ ‘~/tmp/scratch/RtmpMK2PBZ’   ‘~/tmp/scratch/RtmpN8d035’ ‘~/tmp/scratch/RtmpNFi88v’   ‘~/tmp/scratch/RtmpNSu88q’ ‘~/tmp/scratch/RtmpNwgI4E’   ‘~/tmp/scratch/RtmpO6b0R2’ ‘~/tmp/scratch/RtmpOAgsJ1’   ‘~/tmp/scratch/RtmpPZQSWZ’ ‘~/tmp/scratch/RtmpPaAN2R’   ‘~/tmp/scratch/RtmpPlhtsK’ ‘~/tmp/scratch/RtmpPmAbKg’   ‘~/tmp/scratch/RtmpQJsQKl’ ‘~/tmp/scratch/RtmpRcALAx’   ‘~/tmp/scratch/RtmpRdKTG2’ ‘~/tmp/scratch/RtmpRteDfZ’   ‘~/tmp/scratch/RtmpS4TSzQ’ ‘~/tmp/scratch/RtmpSIrJlx’   ‘~/tmp/scratch/RtmpSJqwCf’ ‘~/tmp/scratch/RtmpSSbW4b’   ‘~/tmp/scratch/RtmpSlSEzS’ ‘~/tmp/scratch/RtmpTZjuVm’   ‘~/tmp/scratch/RtmpTrYb4E’ ‘~/tmp/scratch/RtmpU4eO4Q’   ‘~/tmp/scratch/RtmpUNov0E’ ‘~/tmp/scratch/RtmpUTzx8X’   ‘~/tmp/scratch/RtmpUeFgdW’ ‘~/tmp/scratch/RtmpVQ7UsM’   ‘~/tmp/scratch/RtmpVwrWDu’ ‘~/tmp/scratch/RtmpW2C15v’   ‘~/tmp/scratch/RtmpWAUli4’ ‘~/tmp/scratch/RtmpWjHZfv’   ‘~/tmp/scratch/RtmpXXyWCr’ ‘~/tmp/scratch/RtmpXea3fW’   ‘~/tmp/scratch/RtmpXwO9Ml’ ‘~/tmp/scratch/RtmpY7GtMf’   ‘~/tmp/scratch/RtmpYFp4bd’ ‘~/tmp/scratch/RtmpYRHBMb’   ‘~/tmp/scratch/RtmpZ2TgTp’ ‘~/tmp/scratch/RtmpZJeXeR’   ‘~/tmp/scratch/RtmpZuYT7m’ ‘~/tmp/scratch/RtmpZybOq2’   ‘~/tmp/scratch/Rtmpa9HLcj’ ‘~/tmp/scratch/RtmpamoZ0L’   ‘~/tmp/scratch/RtmpbZ5XWv’ ‘~/tmp/scratch/RtmpbhBCfP’   ‘~/tmp/scratch/Rtmpc3gqQT’ ‘~/tmp/scratch/RtmpcDVv44’   ‘~/tmp/scratch/RtmpcmADOu’ ‘~/tmp/scratch/RtmpcscBXP’   ‘~/tmp/scratch/Rtmpd05DF4’ ‘~/tmp/scratch/Rtmpd6CBzv’   ‘~/tmp/scratch/RtmpdTnCiW’ ‘~/tmp/scratch/Rtmpdl5Ao6’   ‘~/tmp/scratch/RtmpdpWKaS’ ‘~/tmp/scratch/Rtmpdremct’   ‘~/tmp/scratch/Rtmpdx7mrE’ ‘~/tmp/scratch/RtmpeGiUfH’   ‘~/tmp/scratch/RtmpeJA7F7’ ‘~/tmp/scratch/RtmpePUt1P’   ‘~/tmp/scratch/RtmpeUQdYF’ ‘~/tmp/scratch/Rtmpewnw28’   ‘~/tmp/scratch/Rtmpf8Fv6e’ ‘~/tmp/scratch/RtmpfFYdqP’   ‘~/tmp/scratch/RtmpfHswZL’ ‘~/tmp/scratch/Rtmpfq0ECs’   ‘~/tmp/scratch/RtmpfqDCGe’ ‘~/tmp/scratch/Rtmpg8HtIX’   ‘~/tmp/scratch/RtmpgmFyGF’ ‘~/tmp/scratch/RtmpgxqY2n’   ‘~/tmp/scratch/Rtmph2IPpJ’ ‘~/tmp/scratch/RtmphuUv0I’   ‘~/tmp/scratch/RtmpiND0r6’ ‘~/tmp/scratch/RtmpiS9cCj’   ‘~/tmp/scratch/RtmpiiQK8U’ ‘~/tmp/scratch/Rtmpj95M6P’   ‘~/tmp/scratch/RtmpjcEVdq’ ‘~/tmp/scratch/Rtmpjzi69w’   ‘~/tmp/scratch/RtmpkMWuza’ ‘~/tmp/scratch/RtmpkklBj9’   ‘~/tmp/scratch/RtmplTp2q4’ ‘~/tmp/scratch/RtmpleYrJm’   ‘~/tmp/scratch/Rtmpm3OC98’ ‘~/tmp/scratch/RtmpmNPCJ0’   ‘~/tmp/scratch/RtmpmRvdth’ ‘~/tmp/scratch/RtmpmlYSoW’   ‘~/tmp/scratch/RtmpnBajpv’ ‘~/tmp/scratch/RtmponKoTx’   ‘~/tmp/scratch/Rtmpp7U7qH’ ‘~/tmp/scratch/RtmppDHS0q’   ‘~/tmp/scratch/RtmppeJiVE’ ‘~/tmp/scratch/RtmpqiZqt6’   ‘~/tmp/scratch/Rtmpr6fKFy’ ‘~/tmp/scratch/RtmprGegvX’   ‘~/tmp/scratch/Rtmps6JXld’ ‘~/tmp/scratch/Rtmpu5960z’   ‘~/tmp/scratch/RtmpuOq8cD’ ‘~/tmp/scratch/RtmpubDWso’   ‘~/tmp/scratch/Rtmpuugkl9’ ‘~/tmp/scratch/Rtmpv5efvl’   ‘~/tmp/scratch/Rtmpv7unFu’ ‘~/tmp/scratch/RtmpvV1wzg’   ‘~/tmp/scratch/RtmpwJxZ1i’ ‘~/tmp/scratch/RtmpwcUhP3’   ‘~/tmp/scratch/RtmpwcV2j3’ ‘~/tmp/scratch/RtmpwlW6Pn’   ‘~/tmp/scratch/Rtmpx3pdtD’ ‘~/tmp/scratch/RtmpxOrMne’   ‘~/tmp/scratch/Rtmpy1hMiA’ ‘~/tmp/scratch/RtmpyFVIgg’   ‘~/tmp/scratch/RtmpyWD9gY’ ‘~/tmp/scratch/RtmpyzILaj’   ‘~/tmp/scratch/RtmpzjPVPN’ ‘~/tmp/scratch/xvfb-run.0jAY1H’   ‘~/tmp/scratch/xvfb-run.12HLFq’ ‘~/tmp/scratch/xvfb-run.4DBhli’   ‘~/tmp/scratch/xvfb-run.4aTGLc’ ‘~/tmp/scratch/xvfb-run.767ocx’   ‘~/tmp/scratch/xvfb-run.76iupK’ ‘~/tmp/scratch/xvfb-run.7UpQNz’   ‘~/tmp/scratch/xvfb-run.7g1r8b’ ‘~/tmp/scratch/xvfb-run.8sR3LF’   ‘~/tmp/scratch/xvfb-run.9VNUJ9’ ‘~/tmp/scratch/xvfb-run.9WKNtL’   ‘~/tmp/scratch/xvfb-run.9df1xJ’ ‘~/tmp/scratch/xvfb-run.9mfeSH’   ‘~/tmp/scratch/xvfb-run.AJUSF1’ ‘~/tmp/scratch/xvfb-run.AT0fbT’   ‘~/tmp/scratch/xvfb-run.AW8Pp3’ ‘~/tmp/scratch/xvfb-run.AjcO17’   ‘~/tmp/scratch/xvfb-run.Alk3no’ ‘~/tmp/scratch/xvfb-run.B4RiKC’   ‘~/tmp/scratch/xvfb-run.DhDhPN’ ‘~/tmp/scratch/xvfb-run.EZ5I8u’   ‘~/tmp/scratch/xvfb-run.F1qKep’ ‘~/tmp/scratch/xvfb-run.GFpBkQ’   ‘~/tmp/scratch/xvfb-run.GMxxBU’ ‘~/tmp/scratch/xvfb-run.GUp2za’   ‘~/tmp/scratch/xvfb-run.GWxr1w’ ‘~/tmp/scratch/xvfb-run.JiRicu’   ‘~/tmp/scratch/xvfb-run.LjAym8’ ‘~/tmp/scratch/xvfb-run.MP4TkT’   ‘~/tmp/scratch/xvfb-run.NI1vJc’ ‘~/tmp/scratch/xvfb-run.OASlNP’   ‘~/tmp/scratch/xvfb-run.Q0mrtY’ ‘~/tmp/scratch/xvfb-run.QqLYy3’   ‘~/tmp/scratch/xvfb-run.QxzoIq’ ‘~/tmp/scratch/xvfb-run.R1rcHc’   ‘~/tmp/scratch/xvfb-run.TDVYIB’ ‘~/tmp/scratch/xvfb-run.TcDGz3’   ‘~/tmp/scratch/xvfb-run.UDPC01’ ‘~/tmp/scratch/xvfb-run.UO2cNq’   ‘~/tmp/scratch/xvfb-run.VNHJL6’ ‘~/tmp/scratch/xvfb-run.VfPQmn’   ‘~/tmp/scratch/xvfb-run.WP9GeM’ ‘~/tmp/scratch/xvfb-run.X1wiNN’   ‘~/tmp/scratch/xvfb-run.YFh69V’ ‘~/tmp/scratch/xvfb-run.Zet8dY’   ‘~/tmp/scratch/xvfb-run.a8KZVe’ ‘~/tmp/scratch/xvfb-run.aLeDux’   ‘~/tmp/scratch/xvfb-run.bdcjo7’ ‘~/tmp/scratch/xvfb-run.dG3ZNS’   ‘~/tmp/scratch/xvfb-run.eETUYR’ ‘~/tmp/scratch/xvfb-run.f2CjZY’   ‘~/tmp/scratch/xvfb-run.hPvVjP’ ‘~/tmp/scratch/xvfb-run.hdHzrV’   ‘~/tmp/scratch/xvfb-run.iXvlr0’ ‘~/tmp/scratch/xvfb-run.ic5Wwz’   ‘~/tmp/scratch/xvfb-run.imH6Tv’ ‘~/tmp/scratch/xvfb-run.jWRVMJ’   ‘~/tmp/scratch/xvfb-run.mg3whL’ ‘~/tmp/scratch/xvfb-run.naoCWA’   ‘~/tmp/scratch/xvfb-run.noJ5V4’ ‘~/tmp/scratch/xvfb-run.o1AKYH’   ‘~/tmp/scratch/xvfb-run.o3z0cJ’ ‘~/tmp/scratch/xvfb-run.oarEGI’   ‘~/tmp/scratch/xvfb-run.q036oW’ ‘~/tmp/scratch/xvfb-run.q6bXfe’   ‘~/tmp/scratch/xvfb-run.sEMZgy’ ‘~/tmp/scratch/xvfb-run.sTtmmu’   ‘~/tmp/scratch/xvfb-run.uskMKS’ ‘~/tmp/scratch/xvfb-run.v1GapA’   ‘~/tmp/scratch/xvfb-run.vpn5o4’ ‘~/tmp/scratch/xvfb-run.wLVd7l’   ‘~/tmp/scratch/xvfb-run.xCwSL0’ ‘~/tmp/scratch/xvfb-run.xIC8ye’   ‘~/tmp/scratch/xvfb-run.ygrlop’
• DONE

Status: 2 NOTEs