* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘mas’ ... ** this is package ‘mas’ version ‘0.3’ ** package ‘mas’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/tmp/RtmpKvKhDM/R.INSTALL1f8244d09d341/mas/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GWAS.cpp -o GWAS.o In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25, from GWAS.cpp:3: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits<Packet4f> { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits<Packet2d> { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) { | ^ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’ 266 | Alignment = internal::traits<Coefficients>::Alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits<Quaternion<float> >::Alignment | ^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’ 178 | class Matrix | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion<float>’ 273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> > | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’ 266 | Alignment = internal::traits<Coefficients>::Alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits<Quaternion<double> >::Alignment | ^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’ 178 | class Matrix | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion<double>’ 273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> > | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet<double> T; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, -1>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, -1, -1> >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, -1, -1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, -1, -1>’ 178 | class Matrix | ^~~~~~ GWAS.cpp:10:42: required from here 10 | int cores = 1, bool verb = true){ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, -1, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, -1, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, -1, -1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, -1, -1>’ 178 | class Matrix | ^~~~~~ GWAS.cpp:10:42: required from here 10 | int cores = 1, bool verb = true){ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, 1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, 1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, -1, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, -1, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, -1, 1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, -1, 1>’ 178 | class Matrix | ^~~~~~ GWAS.cpp:29:19: required from here 29 | Eigen::VectorXf n = Z.colwise().sum(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0>’ 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type, | ^~~~~~~~~~~~~~~~ GWAS.cpp:29:38: required from here 29 | Eigen::VectorXf n = Z.colwise().sum(); | ~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:30:31: required from here 30 | Eigen::VectorXf iN = n.array().inverse(); | ~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:30:41: required from here 30 | Eigen::VectorXf iN = n.array().inverse(); | ~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 1>’ 223 | template<typename Derived> class MapBase<Derived, WriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<float, -1, -1>, -1, 1, true, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<float, -1, -1>, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ GWAS.cpp:36:34: required from here 36 | for(int j=0; j<f; j++){WM.col(j)=M.col(j).array()*Z.col(i).array();} | ~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:36:52: required from here 36 | for(int j=0; j<f; j++){WM.col(j)=M.col(j).array()*Z.col(i).array();} | ~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:36:70: required from here 36 | for(int j=0; j<f; j++){WM.col(j)=M.col(j).array()*Z.col(i).array();} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<float, -1, -1> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:37:24: required from here 37 | iMM = (WM.transpose()*WM).inverse(); | ~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:37:27: required from here 37 | iMM = (WM.transpose()*WM).inverse(); | ^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Inverse<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Inverse<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Inverse<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Inverse.h:68:7: required from ‘class Eigen::InverseImpl<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Dense>’ 68 | class InverseImpl | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from ‘class Eigen::Inverse<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Matrix<float, -1, -1>, 0> >’ 43 | class Inverse : public InverseImpl<XprType,typename internal::traits<XprType>::StorageKind> | ^~~~~~~ GWAS.cpp:37:38: required from here 37 | iMM = (WM.transpose()*WM).inverse(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:38:36: required from here 38 | MU.col(i) = iMM * WM.transpose()*Y.col(i); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:38:45: required from here 38 | MU.col(i) = iMM * WM.transpose()*Y.col(i); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:39:37: required from here 39 | y.col(i) = (Y.col(i)-WM*MU.col(i) ).array()*Z.col(i).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:39:37: required from here 39 | y.col(i) = (Y.col(i)-WM*MU.col(i) ).array()*Z.col(i).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:39:46: required from here 39 | y.col(i) = (Y.col(i)-WM*MU.col(i) ).array()*Z.col(i).array(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:39:64: required from here 39 | y.col(i) = (Y.col(i)-WM*MU.col(i) ).array()*Z.col(i).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:45:85: required from here 45 | for(int j=0; j<m; j++){ GEN.col(j) = (GEN.col(j) - M*(iMM*M.transpose()*GEN.col(j))).array(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:45:85: required from here 45 | for(int j=0; j<m; j++){ GEN.col(j) = (GEN.col(j) - M*(iMM*M.transpose()*GEN.col(j))).array(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Product<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 0>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0> > >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:45:93: required from here 45 | for(int j=0; j<m; j++){ GEN.col(j) = (GEN.col(j) - M*(iMM*M.transpose()*GEN.col(j))).array(); } | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<float, -1, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<float, -1, 1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<float, -1, 1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<float, -1, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<float, -1, 1> >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<float, -1, 1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<float, -1, 1>’ 45 | class Array | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:106:24: required from ‘class Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> >’ 106 | typedef Ref<ArrayXr> ArrayRef; | ^~~~~~~~ GWAS.cpp:49:38: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<float, -1, -1>, -1, -1, true, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::Matrix<float, -1, -1>, -1, -1, true, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ GWAS.cpp:52:45: required from here 52 | Eigen::MatrixXf V = svd.matrixV().leftCols(npc); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<float, -1, 1>, -1, 1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::Matrix<float, -1, 1>, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<const Eigen::Matrix<float, -1, 1>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ GWAS.cpp:53:48: required from here 53 | Eigen::VectorXf D = svd.singularValues().head(npc); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ GWAS.cpp:54:70: required from here 54 | Eigen::MatrixXf X = (svd.matrixU().leftCols(npc) * D.array().matrix().asDiagonal()); | ~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:54:84: required from here 54 | Eigen::MatrixXf X = (svd.matrixU().leftCols(npc) * D.array().matrix().asDiagonal()); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1>’ 223 | template<typename Derived> class MapBase<Derived, WriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<float, -1, -1>, 1, -1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<float, -1, -1>, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ GWAS.cpp:60:33: required from here 60 | for(int i=0; i<p; i++){ XX.row(i) = X.col(i).array().square().matrix().transpose() * Z;} | ~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:60:62: required from here 60 | for(int i=0; i<p; i++){ XX.row(i) = X.col(i).array().square().matrix().transpose() * Z;} | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ GWAS.cpp:60:71: required from here 60 | for(int i=0; i<p; i++){ XX.row(i) = X.col(i).array().square().matrix().transpose() * Z;} | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:60:83: required from here 60 | for(int i=0; i<p; i++){ XX.row(i) = X.col(i).array().square().matrix().transpose() * Z;} | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > > >, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:60:88: required from here 60 | for(int i=0; i<p; i++){ XX.row(i) = X.col(i).array().square().matrix().transpose() * Z;} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::PartialReduxExpr<Eigen::Matrix<float, -1, -1>, Eigen::internal::member_sum<float, float>, 0> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:61:49: required from here 61 | Eigen::VectorXf MSX = XX.colwise().sum().array(); MSX=MSX.array()*iN.array(); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:61:78: required from here 61 | Eigen::VectorXf MSX = XX.colwise().sum().array(); MSX=MSX.array()*iN.array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:63:19: required from here 63 | iN = (n.array()-f).inverse(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:63:19: required from here 63 | iN = (n.array()-f).inverse(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:63:29: required from here 63 | iN = (n.array()-f).inverse(); | ~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:43:39: required from ‘struct Eigen::internal::traits<Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0> >’ 43 | typedef typename MatrixType::Scalar InputScalar; | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0>’ 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type, | ^~~~~~~~~~~~~~~~ GWAS.cpp:64:47: required from here 64 | Eigen::VectorXf vy = y.colwise().squaredNorm(); vy=vy.array()*iN.array(); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0>’ 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type, | ^~~~~~~~~~~~~~~~ GWAS.cpp:64:47: required from here 64 | Eigen::VectorXf vy = y.colwise().squaredNorm(); vy=vy.array()*iN.array(); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:65:29: required from here 65 | Eigen::VectorXf ve = vy * 0.5; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:65:29: required from here 65 | Eigen::VectorXf ve = vy * 0.5; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:68:30: required from here 68 | vb = (ve.array()/MSX.array()).matrix().asDiagonal(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ GWAS.cpp:68:39: required from here 68 | vb = (ve.array()/MSX.array()).matrix().asDiagonal(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Inverse<Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Inverse<Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Inverse<Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Inverse.h:68:7: required from ‘class Eigen::InverseImpl<Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 68 | class InverseImpl | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from ‘class Eigen::Inverse<Eigen::Matrix<float, -1, -1> >’ 43 | class Inverse : public InverseImpl<XprType,typename internal::traits<XprType>::StorageKind> | ^~~~~~~ GWAS.cpp:69:34: required from here 69 | Eigen::MatrixXf iG = vb.inverse(); | ~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:70:48: required from here 70 | Eigen::VectorXf h2 = 1 - ve.array()/vy.array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ GWAS.cpp:78:44: required from here 78 | Eigen::MatrixXf b = Eigen::MatrixXf::Zero(p,k); | ~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:80:34: required from here 80 | Eigen::MatrixXf e(n0,k); e = y*1.0; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:80:34: required from here 80 | Eigen::MatrixXf e(n0,k); e = y*1.0; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:92:21: required from ‘class Eigen::Tridiagonalization<Eigen::Matrix<float, -1, -1> >’ 92 | >::type DiagonalReturnType; | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:111:62: required from ‘class Eigen::SelfAdjointEigenSolver<Eigen::Matrix<float, -1, -1> >’ 111 | typedef typename TridiagonalizationType::SubDiagonalType SubDiagonalType; | ^~~~~~~~~~~~~~~ GWAS.cpp:84:58: required from here 84 | Eigen::SelfAdjointEigenSolver<Eigen::MatrixXf> EVDofA(A); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, -1>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, -1>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:97:21: required from ‘class Eigen::Tridiagonalization<Eigen::Matrix<float, -1, -1> >’ 97 | >::type SubDiagonalReturnType; | ^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:111:62: required from ‘class Eigen::SelfAdjointEigenSolver<Eigen::Matrix<float, -1, -1> >’ 111 | typedef typename TridiagonalizationType::SubDiagonalType SubDiagonalType; | ^~~~~~~~~~~~~~~ GWAS.cpp:84:58: required from here 84 | Eigen::SelfAdjointEigenSolver<Eigen::MatrixXf> EVDofA(A); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:95:36: required from here 95 | Eigen::VectorXf iNp = (n.array()+df0-f).inverse(); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:95:40: required from here 95 | Eigen::VectorXf iNp = (n.array()+df0-f).inverse(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:95:50: required from here 95 | Eigen::VectorXf iNp = (n.array()+df0-f).inverse(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:119:21: required from here 119 | b0 = b.row(J)*1.0; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:119:21: required from here 119 | b0 = b.row(J)*1.0; | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ GWAS.cpp:120:30: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:120:56: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:120:64: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:120:79: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ GWAS.cpp:120:88: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:121:32: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:121:35: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:121:43: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:121:63: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<float, -1, 1>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<float, -1, 1> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:121:78: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:121:86: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:121:87: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Matrix<float, -1, -1>, 0> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:121:87: required from here 121 | RHS = (X.col(J).transpose()*e).array() + XX.row(J).array()*b0.transpose().array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:123:43: required from here 123 | if(k==1){ b1 = RHS.array()/LHS.array(); }else{ | ~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:123:44: required from here 123 | if(k==1){ b1 = RHS.array()/LHS.array(); }else{ | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Solve<Eigen::SVDBase<Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> > >, Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Solve<Eigen::SVDBase<Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> > >, Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Solve<Eigen::SVDBase<Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> > >, Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl<Eigen::SVDBase<Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> > >, Eigen::Matrix<float, -1, 1>, Eigen::Dense>’ 86 | class SolveImpl<Decomposition,RhsType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve<Eigen::SVDBase<Eigen::BDCSVD<Eigen::Matrix<float, -1, -1> > >, Eigen::Matrix<float, -1, 1> >’ 62 | class Solve : public SolveImpl<Decomposition,RhsType,typename internal::traits<RhsType>::StorageKind> | ^~~~~ GWAS.cpp:124:71: required from here 124 | b1 = LHS.bdcSvd(Eigen::ComputeThinU|Eigen::ComputeThinV).solve(RHS);} | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:127:28: required from here 127 | e = (e-(X.col(J)*(b1-b0).transpose()).cwiseProduct(Z)).matrix(); | ^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ GWAS.cpp:127:41: required from here 127 | e = (e-(X.col(J)*(b1-b0).transpose()).cwiseProduct(Z)).matrix(); | ~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0, 5>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:127:42: required from here 127 | e = (e-(X.col(J)*(b1-b0).transpose()).cwiseProduct(Z)).matrix(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:127:57: required from here 127 | e = (e-(X.col(J)*(b1-b0).transpose()).cwiseProduct(Z)).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Matrix<float, -1, 1>, const Eigen::Matrix<float, -1, 1> > >, 0>, const Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:127:59: required from here 127 | e = (e-(X.col(J)*(b1-b0).transpose()).cwiseProduct(Z)).matrix(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:131:25: required from here 131 | ve = (e.cwiseProduct(y)).colwise().sum(); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::PartialReduxExpr<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::PartialReduxExpr<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::PartialReduxExpr<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, Eigen::internal::member_sum<float, float>, 0>’ 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr<MatrixType, MemberOp, Direction> >::type, | ^~~~~~~~~~~~~~~~ GWAS.cpp:131:43: required from here 131 | ve = (e.cwiseProduct(y)).colwise().sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:133:31: required from here 133 | ve = (ve.array()+Se.array()) * iNp.array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:133:46: required from here 133 | ve = (ve.array()+Se.array()) * iNp.array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:139:44: required from here 139 | Dinv.col(i) = (XX.col(i).array()/ve(i) + iG(i,i)).inverse().array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:139:54: required from here 139 | Dinv.col(i) = (XX.col(i).array()/ve(i) + iG(i,i)).inverse().array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_inverse_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:139:64: required from here 139 | Dinv.col(i) = (XX.col(i).array()/ve(i) + iG(i,i)).inverse().array(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 6>’ 126 | class dense_product_base<Lhs, Rhs, Option, InnerProduct> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:140:57: required from here 140 | TrDinvXX(i) = (XX.col(i).transpose() * Dinv.col(i));} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 1>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 179 | typedef typename internal::find_best_packet<Scalar,SizeAtCompileTime>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 6>’ 126 | class dense_product_base<Lhs, Rhs, Option, InnerProduct> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:140:57: required from here 140 | TrDinvXX(i) = (XX.col(i).transpose() * Dinv.col(i));} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::Matrix<float, -1, -1> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:141:54: required from here 141 | TildeHat = b.transpose()* Dinv.cwiseProduct(tilde); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:160:25: required from here 160 | A.diagonal().array() += inflate;} | ~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:164:40: required from here 164 | cnv = log10((beta0.array()-b.array()).square().sum()); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:164:49: required from here 164 | cnv = log10((beta0.array()-b.array()).square().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:166:47: required from here 166 | CNV2(numit) = log10((h20.array()-h2.array()).square().sum()); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:166:56: required from here 166 | CNV2(numit) = log10((h20.array()-h2.array()).square().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:179:27: required from here 179 | Eigen::MatrixXf hat = X*b; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:180:67: required from here 180 | for(int i=0; i<k; i++){ hat.col(i) = ( M * MU.col(i) + hat.col(i)).array(); } | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:180:75: required from here 180 | for(int i=0; i<k; i++){ hat.col(i) = ( M * MU.col(i) + hat.col(i)).array(); } | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ GWAS.cpp:234:34: required from here 234 | iC = 1.0 / ( D.array().square() + (ve(trait)/vb(trait,trait)) ).array(); | ~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:234:65: required from here 234 | iC = 1.0 / ( D.array().square() + (ve(trait)/vb(trait,trait)) ).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:234:75: required from here 234 | iC = 1.0 / ( D.array().square() + (ve(trait)/vb(trait,trait)) ).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:246:66: required from here 246 | tmpCoef = iC.array().matrix().asDiagonal() * X.transpose() * ZM.col(i); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Product<Eigen::DiagonalWrapper<const Eigen::MatrixWrapper<Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, 1>, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:246:78: required from here 246 | tmpCoef = iC.array().matrix().asDiagonal() * X.transpose() * ZM.col(i); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:247:45: required from here 247 | PZM.col(i) = ZM.col(i).array() - (X*tmpCoef).array();} | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ GWAS.cpp:247:59: required from here 247 | PZM.col(i) = ZM.col(i).array() - (X*tmpCoef).array();} | ~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:247:60: required from here 247 | PZM.col(i) = ZM.col(i).array() - (X*tmpCoef).array();} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, -1> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:252:41: required from here 252 | ZPy = ZM.transpose() * e.col(trait); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, const Eigen::ArrayWrapper<const Eigen::Product<Eigen::Matrix<float, -1, -1>, Eigen::Matrix<float, -1, 1>, 0> > >, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:257:75: required from here 257 | yZg = (y.col(trait).array()-(ZM*gamma).array())* Z.col(trait).array(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0, 6>’ 126 | class dense_product_base<Lhs, Rhs, Option, InnerProduct> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:259:31: required from here 259 | VarE = (yZg.transpose()*PyZg); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:261:34: required from here 261 | tmp = (gamma.transpose() * ZPZ * gamma).trace(); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0, 6>’ 126 | class dense_product_base<Lhs, Rhs, Option, InnerProduct> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ GWAS.cpp:261:40: required from here 261 | tmp = (gamma.transpose() * ZPZ * gamma).trace(); | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:280:70: required from here 280 | PopWald.row(J) = gamma.array().square() * ZPZ.diagonal().array()/VarE;} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, const Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> > >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:280:72: required from here 280 | PopWald.row(J) = gamma.array().square() * ZPZ.diagonal().array()/VarE;} | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ GWAS.cpp:350:46: required from here 350 | vb = (ve.array()/ (TrZSZ.array()*iN.array()) ).matrix().asDiagonal(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ GWAS.cpp:350:57: required from here 350 | vb = (ve.array()/ (TrZSZ.array()*iN.array()) ).matrix().asDiagonal(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<float, -1, -1>, 1>, Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<float, -1, -1>, 1>, Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<float, -1, -1>, 1>, Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl<Eigen::LLT<Eigen::Matrix<float, -1, -1>, 1>, Eigen::Matrix<float, -1, 1>, Eigen::Dense>’ 86 | class SolveImpl<Decomposition,RhsType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve<Eigen::LLT<Eigen::Matrix<float, -1, -1>, 1>, Eigen::Matrix<float, -1, 1> >’ 62 | class Solve : public SolveImpl<Decomposition,RhsType,typename internal::traits<RhsType>::StorageKind> | ^~~~~ GWAS.cpp:394:27: required from here 394 | b1 = LHS.llt().solve(RHS); | ~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, 1, 0, 1, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, 1, 0, 1, 1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, 1, 0, 1, 1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 1, 1, 0, 1, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 1, 1, 0, 1, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 1, 1, 0, 1, 1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:167:44: required from ‘struct Eigen::internal::evaluator<Eigen::PlainObjectBase<Eigen::Matrix<float, 1, 1, 0, 1, 1> > >’ 167 | typedef typename PlainObjectType::Scalar Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:273:8: required from ‘struct Eigen::internal::evaluator<Eigen::Matrix<float, 1, 1, 0, 1, 1> >’ 273 | struct evaluator<Matrix<Scalar, Rows, Cols, Options, MaxRows, MaxCols> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from ‘struct Eigen::internal::product_evaluator<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>, 6, Eigen::DenseShape, Eigen::DenseShape, float, float>’ 96 | struct product_evaluator<Product<Lhs, Rhs, Options>, ProductTag, LhsShape, RhsShape> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: required from ‘struct Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0> >’ 29 | struct evaluator<Product<Lhs, Rhs, Options> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:137:22: required from ‘Eigen::internal::dense_product_base<Lhs, Rhs, Option, 6>::operator const Scalar() const [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Option = 0; Scalar = float]’ 137 | return internal::evaluator<ProductXpr>(derived()).coeff(0,0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:140:45: required from here 140 | TrDinvXX(i) = (XX.col(i).transpose() * Dinv.col(i));} | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:453:34: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 453 | RealScalar scale = mat.cwiseAbs().maxCoeff(); | ~~~~~~~~~~~~^~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:27:67: required from ‘Derived& Eigen::ArrayBase<Derived>::operator+=(const Scalar&) [with Derived = Eigen::ArrayWrapper<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0> >; Scalar = float]’ 27 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::add_assign_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:160:31: required from here 160 | A.diagonal().array() += inflate;} | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:510:28: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::MatrixBase<Derived>::trace() const [with Derived = Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 510 | return derived().diagonal().sum(); | ~~~~~~~~~~~~~~~~~~^~ GWAS.cpp:261:52: required from here 261 | tmp = (gamma.transpose() * ZPZ * gamma).trace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 1, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 1, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 1, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/QR/ColPivHouseholderQR.h:440:19: required from ‘class Eigen::ColPivHouseholderQR<Eigen::Matrix<float, -1, -1> >’ 440 | RowVectorType m_temp; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:246:10: required from ‘struct Eigen::internal::qr_preconditioner_impl<Eigen::Matrix<float, -1, -1>, 2, 0, true>’ 246 | QRType m_qr; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:609:110: required from ‘class Eigen::JacobiSVD<Eigen::Matrix<float, -1, -1>, 2>’ 609 | internal::qr_preconditioner_impl<MatrixType, QRPreconditioner, internal::PreconditionIfMoreColsThanRows> m_qr_precond_morecols; | ^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:281:43: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 281 | if (m_isTranspose) copy = matrix.adjoint()/scale; | ~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:281:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 281 | if (m_isTranspose) copy = matrix.adjoint()/scale; | ~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:281:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 281 | if (m_isTranspose) copy = matrix.adjoint()/scale; | ~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Matrix<float, -1, -1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:282:35: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 282 | else copy = matrix/scale; | ~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 2, -1, 1, 2, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 2, -1, 1, 2, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 2, -1, 1, 2, -1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 2, -1, 1, 2, -1>’ 178 | class Matrix | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BandMatrix.h:230:22: required from ‘class Eigen::internal::BandMatrix<float, -1, -1, 1, 0, 1>’ 230 | CoefficientsType m_coeffs; | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:86:20: required from ‘class Eigen::internal::UpperBidiagonalization<Eigen::Matrix<float, -1, -1> >’ 86 | BidiagonalType m_bidiagonal; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<float, -1, -1>, -1, -1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<float, -1, -1>, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:292:21: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 292 | m_computed.topRows(m_diagSize) = bid.bidiagonal().toDenseMatrix().transpose(); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<float, -1, 1>, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Matrix<float, -1, 1>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:308:28: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 308 | m_singularValues.tail(m_diagSize - i - 1).setZero(); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:141:7: required from ‘class Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>’ 141 | > ConjugateReturnType; | ^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:44: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:20:67: required from ‘Derived& Eigen::DenseBase<Derived>::operator*=(const Scalar&) [with Derived = Eigen::Matrix<float, -1, 1>; Scalar = float]’ 20 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::mul_assign_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:463:14: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 463 | m_eivalues *= scale; | ~~~~~~~~~~~^~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:437:30: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 437 | m_naiveU.row(0).segment(firstCol, n + 1).real() = b.matrixU().row(0); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<float, -1, -1>, 1, -1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::Matrix<float, -1, -1>, 1, -1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:437:72: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 437 | m_naiveU.row(0).segment(firstCol, n + 1).real() = b.matrixU().row(0); | ~~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:442:34: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 442 | m_computed.diagonal().segment(firstCol + shift, n) = b.singularValues().head(n); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:497:52: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 497 | MatrixXr q1 (m_naiveU.col(firstCol + k).segment(firstCol, k + 1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:506:122: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 506 | m_naiveU.col(firstCol).segment(firstCol + k + 1, n - k) = m_naiveU.col(lastCol + 1).segment(firstCol + k + 1, n - k) * s0; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:535:78: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 535 | m_computed.col(firstCol + shift).segment(firstCol + shift + 1, k) = alphaK * l.transpose().real(); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 2, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 2, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 2, -1> >’ 98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> > >’ 32 | enum { has_direct_access = (traits<Derived>::Flags & DirectAccessBit) ? 1 : 0, | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >’ 111 | int Level = internal::accessors_level<Derived>::has_write_access ? WriteAccessors : ReadOnlyAccessors | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:569:47: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 569 | Map<Matrix<RealScalar,2,Dynamic>,Aligned> tmp(m_workspace.data(),2,n+1); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >, 1>’ 223 | template<typename Derived> class MapBase<Derived, WriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<float, 2, -1>, 16, Eigen::Stride<0, 0> >’ 94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:569:47: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 569 | Map<Matrix<RealScalar,2,Dynamic>,Aligned> tmp(m_workspace.data(),2,n+1); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<float, -1, -1>, -1, -1, true, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:570:40: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 570 | tmp.noalias() = m_naiveU.middleCols(firstCol, n+1) * UofSVD; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, true>, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:570:56: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 570 | tmp.noalias() = m_naiveU.middleCols(firstCol, n+1) * UofSVD; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:583:70: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 583 | m_computed.block(firstCol + shift, firstCol + shift, n, n).diagonal() = singVals; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:338:34: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 338 | m_matrixU = MatrixX::Identity(householderU.cols(), Ucols); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from ‘struct Eigen::internal::cast_return_type<Eigen::Matrix<float, -1, -1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<float, float>, const Eigen::Matrix<float, -1, -1> > >’ 513 | typedef typename _CastType::Scalar NewScalarType; | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from ‘struct Eigen::DenseBase<Eigen::Matrix<float, -1, -1> >::CastXpr<float>’ 48 | template<class NewType> struct CastXpr { typedef typename internal::cast_return_type<Derived,const CwiseUnaryOp<internal::scalar_cast_op<Scalar, NewType>, const Derived> >::type Type; }; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of ‘template<class NewType> typename Eigen::DenseBase<Eigen::Matrix<float, -1, -1> >::CastXpr<NewType>::Type Eigen::DenseBase<Eigen::Matrix<float, -1, -1> >::cast() const [with NewType = float]’ 62 | cast() const | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:339:83: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 339 | m_matrixU.topLeftCorner(m_diagSize, m_diagSize) = naiveV.template cast<Scalar>().topLeftCorner(m_diagSize, m_diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<float, -1, -1>, -1, -1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::Matrix<float, -1, -1>, -1, -1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:339:99: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 339 | m_matrixU.topLeftCorner(m_diagSize, m_diagSize) = naiveV.template cast<Scalar>().topLeftCorner(m_diagSize, m_diagSize); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, -1>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:451:40: required from ‘static void Eigen::internal::tridiagonalization_inplace_selector<MatrixType, Size, IsComplex>::run(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; MatrixType = Eigen::Matrix<float, -1, -1>; int Size = -1; bool IsComplex = false; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 451 | subdiag = mat.template diagonal<-1>().real(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:434:55: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 434 | tridiagonalization_inplace_selector<MatrixType>::run(mat, diag, subdiag, hcoeffs, extractQ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:458:39: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 458 | internal::tridiagonalization_inplace(mat, diag, m_subdiag, m_hcoeffs, computeEigenvectors); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’ 223 | template<typename Derived> class MapBase<Derived, WriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >’ 94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:894:57: required from ‘void Eigen::internal::tridiagonal_qr_step(RealScalar*, RealScalar*, Index, Index, Scalar*, Index) [with int StorageOrder = 0; RealScalar = float; Scalar = float; Index = long int]’ 894 | Map<Matrix<Scalar,Dynamic,Dynamic,StorageOrder> > q(matrixQ,n,n); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:548:87: required from ‘Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagType = Eigen::Matrix<float, -1, 1>; SubDiagType = Eigen::Matrix<float, -1, 1>; Eigen::Index = long int]’ 548 | internal::tridiagonal_qr_step<MatrixType::Flags&RowMajorBit ? RowMajor : ColMajor>(diag.data(), subdiag.data(), start, end, computeEigenvectors ? eivec.data() : (Scalar*)0, n); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:460:49: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 460 | m_info = internal::computeFromTridiagonal_impl(diag, m_subdiag, m_maxIterations, computeEigenvectors, m_eivec); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1, 6>’ 126 | class dense_product_base<Lhs, Rhs, Option, InnerProduct> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:65:8: required from ‘struct Eigen::internal::evaluator<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 65 | struct evaluator<Diagonal<const Product<Lhs, Rhs, DefaultProduct>, DiagIndex> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<float, float>; Derived = Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:510:34: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::MatrixBase<Derived>::trace() const [with Derived = Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 510 | return derived().diagonal().sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ GWAS.cpp:261:52: required from here 261 | tmp = (gamma.transpose() * ZPZ * gamma).trace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1626:36: required from ‘struct Eigen::internal::evaluator<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 1>, 0> >’ 1626 | typedef typename XprType::Scalar Scalar; | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:65:8: required from ‘struct Eigen::internal::evaluator<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 65 | struct evaluator<Diagonal<const Product<Lhs, Rhs, DefaultProduct>, DiagIndex> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator<Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0> >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<float, float>; Derived = Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Diagonal<const Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:510:34: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::MatrixBase<Derived>::trace() const [with Derived = Eigen::Product<Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, -1>, 0>, Eigen::Matrix<float, -1, 1>, 0>; typename Eigen::internal::traits<T>::Scalar = float]’ 510 | return derived().diagonal().sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ GWAS.cpp:261:52: required from here 261 | tmp = (gamma.transpose() * ZPZ * gamma).trace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:697:60: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 697 | m_workMatrix = matrix.block(0,0,m_diagSize,m_diagSize) / scale; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >, 0>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:705:61: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 705 | RealScalar maxDiagEntry = m_workMatrix.cwiseAbs().diagonal().maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_opposite_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_opposite_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:765:62: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 765 | if(computeU() && (a<RealScalar(0))) m_matrixU.col(i) = -m_matrixU.col(i); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BandMatrix.h:138:32: required from ‘void Eigen::internal::BandMatrixBase<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, -1>; Derived = Eigen::internal::BandMatrix<float, -1, -1, 1, 0, 1>]’ 138 | dst.diagonal() = diagonal(); | ~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BandMatrix.h:148:13: required from ‘Eigen::internal::BandMatrixBase<Derived>::DenseMatrixType Eigen::internal::BandMatrixBase<Derived>::toDenseMatrix() const [with Derived = Eigen::internal::BandMatrix<float, -1, -1, 1, 0, 1>; DenseMatrixType = Eigen::Matrix<float, -1, -1>]’ 148 | evalTo(res); | ~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:292:66: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 292 | m_computed.topRows(m_diagSize) = bid.bidiagonal().toDenseMatrix().transpose(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 16777215>’ 63 | template<typename MatrixType, int _DiagIndex> class Diagonal | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BandMatrix.h:140:21: required from ‘void Eigen::internal::BandMatrixBase<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, -1>; Derived = Eigen::internal::BandMatrix<float, -1, -1, 1, 0, 1>]’ 140 | dst.diagonal(i) = diagonal(i); | ~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BandMatrix.h:148:13: required from ‘Eigen::internal::BandMatrixBase<Derived>::DenseMatrixType Eigen::internal::BandMatrixBase<Derived>::toDenseMatrix() const [with Derived = Eigen::internal::BandMatrix<float, -1, -1, 1, 0, 1>; DenseMatrixType = Eigen::Matrix<float, -1, -1>]’ 148 | evalTo(res); | ~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:292:66: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 292 | m_computed.topRows(m_diagSize) = bid.bidiagonal().toDenseMatrix().transpose(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, 1, -1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, 1, -1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, 1, -1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, 1, -1> >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>; Scalar = float]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:293:46: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 293 | m_computed.template bottomRows<1>().setZero(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1186:29: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1186 | Block<MatrixXr,Dynamic,1> col0(m_computed, firstCol+shift, firstCol+shift, length, 1); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1191:33: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1191 | RealScalar maxDiag = diag.tail((std::max)(Index(1),length-1)).cwiseAbs().maxCoeff(); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1191:73: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1191 | RealScalar maxDiag = diag.tail((std::max)(Index(1),length-1)).cwiseAbs().maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1193:117: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1193 | RealScalar epsilon_coarse = Literal(8) * NumTraits<RealScalar>::epsilon() * numext::maxi<RealScalar>(col0.cwiseAbs().maxCoeff(), maxDiag); | ~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1246:38: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1246 | bool total_deflation = (col0.tail(length-1).array()<considerZero).all(); | ~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1246:54: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1246 | bool total_deflation = (col0.tail(length-1).array()<considerZero).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:281:76: required from ‘class Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >’ 281 | template<typename PlainObjectType, int Options, typename StrideType> class Ref | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:599:12: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 599 | ArrayRef col0 = m_computed.col(firstCol).segment(firstCol, n); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:277: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:599:12: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 599 | ArrayRef col0 = m_computed.col(firstCol).segment(firstCol, n); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:599:12: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 599 | ArrayRef col0 = m_computed.col(firstCol).segment(firstCol, n); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false> >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Array<float, -1, 1>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:600:19: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 600 | m_workspace.head(n) = m_computed.block(firstCol, firstCol, n, n).diagonal(); | ~~~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Array<float, -1, 1>, -1, 1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:601:12: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 601 | ArrayRef diag = m_workspace.head(n); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Array<float, -1, 1>, 0, Eigen::Stride<0, 0> >’ 94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:625:16: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 625 | Map<ArrayXr> shifts(m_workspace.data()+1*n, n); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:375:17: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 375 | if( (A.col(j).head(n1).array()!=Literal(0)).any() ) | ~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1>’ 56 | template<typename VectorType, int Size> class VectorBlock | ^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:375:25: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 375 | if( (A.col(j).head(n1).array()!=Literal(0)).any() ) | ~~~~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> > | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:375:35: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 375 | if( (A.col(j).head(n1).array()!=Literal(0)).any() ) | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:377:15: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 377 | A1.col(k1) = A.col(j).head(n1); | ~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, 1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:378:15: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 378 | B1.row(k1) = B.row(j); | ~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:389:14: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 389 | A.topRows(n1).noalias() = A1.leftCols(k1) * B1.topRows(k1); | ~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:389:45: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 389 | A.topRows(n1).noalias() = A1.leftCols(k1) * B1.topRows(k1); | ~~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:389:62: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 389 | A.topRows(n1).noalias() = A1.leftCols(k1) * B1.topRows(k1); | ~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, true>, Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:389:50: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 389 | A.topRows(n1).noalias() = A1.leftCols(k1) * B1.topRows(k1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<float, -1, -1>, 16, Eigen::Stride<0, 0> >’ 94 | template<typename PlainObjectType, int MapOptions, typename StrideType> class Map | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:394:27: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 394 | Map<MatrixXr,Aligned> tmp(m_workspace.data(),n,n); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Matrix<float, -1, -1>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:395:22: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 395 | tmp.noalias() = A*B; | ~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:39: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 6>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<float, 1, 1, 0, 1, 1>; Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from ‘Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, Option>, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Lhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Rhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; XprType = Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>]’ 124 | generic_product_impl<Lhs, Rhs, LhsShape, RhsShape, ProductTag>::evalTo(m_result, xpr.lhs(), xpr.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from ‘Eigen::internal::evaluator<Eigen::Product<Lhs, Rhs, Option> >::evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Options = 0; XprType = Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>]’ 35 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE explicit evaluator(const XprType& xpr) : Base(xpr) {} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:137:22: required from ‘Eigen::internal::dense_product_base<Lhs, Rhs, Option, 6>::operator const Scalar() const [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Option = 0; Scalar = float]’ 137 | return internal::evaluator<ProductXpr>(derived()).coeff(0,0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:140:45: required from here 140 | TrDinvXX(i) = (XX.col(i).transpose() * Dinv.col(i));} | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> > >, const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 6>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<float, 1, 1, 0, 1, 1>; Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from ‘Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, Option>, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Lhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Rhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; XprType = Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>]’ 124 | generic_product_impl<Lhs, Rhs, LhsShape, RhsShape, ProductTag>::evalTo(m_result, xpr.lhs(), xpr.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from ‘Eigen::internal::evaluator<Eigen::Product<Lhs, Rhs, Option> >::evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Options = 0; XprType = Eigen::Product<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >, Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, 0>]’ 35 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE explicit evaluator(const XprType& xpr) : Base(xpr) {} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:137:22: required from ‘Eigen::internal::dense_product_base<Lhs, Rhs, Option, 6>::operator const Scalar() const [with Lhs = Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true> >; Rhs = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>; int Option = 0; Scalar = float]’ 137 | return internal::evaluator<ProductXpr>(derived()).coeff(0,0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:140:45: required from here 140 | TrDinvXX(i) = (XX.col(i).transpose() * Dinv.col(i));} | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:370:46: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 370 | * (conj(h) * matA.col(i).tail(remainingSize))); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:31: required from ‘static void Eigen::internal::tridiagonalization_inplace_selector<MatrixType, Size, IsComplex>::run(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; MatrixType = Eigen::Matrix<float, -1, -1>; int Size = -1; bool IsComplex = false; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 449 | tridiagonalization_inplace(mat, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:434:55: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 434 | tridiagonalization_inplace_selector<MatrixType>::run(mat, diag, subdiag, hcoeffs, extractQ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:458:39: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 458 | internal::tridiagonalization_inplace(mat, diag, m_subdiag, m_hcoeffs, computeEigenvectors); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::SelfAdjointView<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, 1> >, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:370:35: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 369 | hCoeffs.tail(n-i-1).noalias() = (matA.bottomRightCorner(remainingSize,remainingSize).template selfadjointView<Lower>() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 | * (conj(h) * matA.col(i).tail(remainingSize))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:31: required from ‘static void Eigen::internal::tridiagonalization_inplace_selector<MatrixType, Size, IsComplex>::run(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; MatrixType = Eigen::Matrix<float, -1, -1>; int Size = -1; bool IsComplex = false; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 449 | tridiagonalization_inplace(mat, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:434:55: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 434 | tridiagonalization_inplace_selector<MatrixType>::run(mat, diag, subdiag, hcoeffs, extractQ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:458:39: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 458 | internal::tridiagonalization_inplace(mat, diag, m_subdiag, m_hcoeffs, computeEigenvectors); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_square_op<float>, const Eigen::CwiseBinaryOp<scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >; Eigen::Index = long int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >; Func = Eigen::internal::scalar_sum_op<float, float>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > > >; Scalar = float]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<float, float>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >; typename Eigen::internal::traits<T>::Scalar = float]’ 418 | return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, -1> > > >; typename Eigen::internal::traits<T>::Scalar = float]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:164:55: required from here 164 | cnv = log10((beta0.array()-b.array()).square().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_square_op<float>, const Eigen::CwiseBinaryOp<scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Eigen::Index = long int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Func = Eigen::internal::scalar_sum_op<float, float>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > > >; Scalar = float]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<float, float>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = float]’ 418 | return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_square_op<float>, const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; typename Eigen::internal::traits<T>::Scalar = float]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op<Scalar,Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:166:62: required from here 166 | CNV2(numit) = log10((h20.array()-h2.array()).square().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:39: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 6>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<float, 1, 1, 0, 1, 1>; Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from ‘Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, Option>, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Lhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Rhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Rhs = Eigen::Matrix<float, -1, 1>; XprType = Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>]’ 124 | generic_product_impl<Lhs, Rhs, LhsShape, RhsShape, ProductTag>::evalTo(m_result, xpr.lhs(), xpr.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from ‘Eigen::internal::evaluator<Eigen::Product<Lhs, Rhs, Option> >::evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Options = 0; XprType = Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>]’ 35 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE explicit evaluator(const XprType& xpr) : Base(xpr) {} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:137:22: required from ‘Eigen::internal::dense_product_base<Lhs, Rhs, Option, 6>::operator const Scalar() const [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Option = 0; Scalar = float]’ 137 | return internal::evaluator<ProductXpr>(derived()).coeff(0,0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:259:30: required from here 259 | VarE = (yZg.transpose()*PyZg); | ~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, const Eigen::Matrix<float, -1, 1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, const Eigen::Matrix<float, -1, 1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, const Eigen::Matrix<float, -1, 1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, const Eigen::Matrix<float, -1, 1>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::Transpose<const Eigen::Transpose<Eigen::Matrix<float, -1, 1> > >, const Eigen::Matrix<float, -1, 1> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 6>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<float, 1, 1, 0, 1, 1>; Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: required from ‘Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, Option>, ProductTag, LhsShape, RhsShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Options = 0; int ProductTag = 6; LhsShape = Eigen::DenseShape; RhsShape = Eigen::DenseShape; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Lhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, Option>::Rhs>::Scalar = float; typename Eigen::Product<Lhs, Rhs, Option>::Rhs = Eigen::Matrix<float, -1, 1>; XprType = Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>]’ 124 | generic_product_impl<Lhs, Rhs, LhsShape, RhsShape, ProductTag>::evalTo(m_result, xpr.lhs(), xpr.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:35:90: required from ‘Eigen::internal::evaluator<Eigen::Product<Lhs, Rhs, Option> >::evaluator(const XprType&) [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Options = 0; XprType = Eigen::Product<Eigen::Transpose<Eigen::Matrix<float, -1, 1> >, Eigen::Matrix<float, -1, 1>, 0>]’ 35 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE explicit evaluator(const XprType& xpr) : Base(xpr) {} | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:137:22: required from ‘Eigen::internal::dense_product_base<Lhs, Rhs, Option, 6>::operator const Scalar() const [with Lhs = Eigen::Transpose<Eigen::Matrix<float, -1, 1> >; Rhs = Eigen::Matrix<float, -1, 1>; int Option = 0; Scalar = float]’ 137 | return internal::evaluator<ProductXpr>(derived()).coeff(0,0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:259:30: required from here 259 | VarE = (yZg.transpose()*PyZg); | ~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:175:44: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:231:121: required from ‘bool Eigen::internal::qr_preconditioner_impl<MatrixType, 2, 0, true>::run(Eigen::JacobiSVD<MatrixType, 2>&, const MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>]’ 231 | svd.m_workMatrix = m_qr.matrixQR().block(0,0,matrix.rows(),matrix.rows()).template triangularView<Upper>().adjoint(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:692:30: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 692 | m_qr_precond_morecols.run(*this, m_scaledMatrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, 2>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, 2>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 2, 2>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 2, 2> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 2, 2> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:25:26: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation<RealScalar>*, Eigen::JacobiRotation<RealScalar>*) [with MatrixType = Eigen::Matrix<float, -1, -1>; RealScalar = float; Index = long int]’ 25 | Matrix<RealScalar,2,2> m; | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1, 1, -1, -1>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1, 1, -1, -1>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, -1, -1, 1, -1, -1>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, -1, -1, 1, -1, -1> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, -1, -1, 1, -1, -1> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<float, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >]’ 836 | call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >; Derived = Eigen::Matrix<float, -1, -1>]’ 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<float, float>, const Eigen::Transpose<const Eigen::Matrix<float, -1, -1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, -1, -1, 1, -1, -1> > >; _Scalar = float; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:281:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 281 | if (m_isTranspose) copy = matrix.adjoint()/scale; | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:339:81: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 339 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, Eigen::internal::IndexBased, float>’ 1464 | struct unary_evaluator<ArrayWrapper<TArgType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator<const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 100 | struct evaluator<const T> | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase<Derived>::all() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<float, float, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits<Scalar>::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1246:74: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1246 | bool total_deflation = (col0.tail(length-1).array()<considerZero).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, Eigen::internal::IndexBased, float>’ 1464 | struct unary_evaluator<ArrayWrapper<TArgType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator<const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> > >’ 100 | struct evaluator<const T> | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:84:50: required from ‘bool Eigen::DenseBase<Derived>::all() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<float, float, Eigen::internal::cmp_LT>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, false>, -1, 1, false> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >]’ 84 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits<Scalar>::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1246:74: required from ‘void Eigen::BDCSVD<MatrixType>::deflation(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 1246 | bool total_deflation = (col0.tail(length-1).array()<considerZero).all(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 542 | deflation(firstCol, lastCol, k, firstRowW, firstColW, shift); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper<const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> > >’ 140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> > | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:768:46: required from ‘void Eigen::BDCSVD<MatrixType>::computeSingVals(const ArrayRef&, const ArrayRef&, const IndicesRef&, VectorType&, ArrayRef, ArrayRef) [with _MatrixType = Eigen::Matrix<float, -1, -1>; ArrayRef = Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >; IndicesRef = Eigen::Ref<Eigen::Array<long int, 1, -1> >; VectorType = Eigen::Matrix<float, -1, 1>]’ 768 | right = (diag(actual_n-1) + col0.matrix().norm()); | ~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:636:3: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 636 | computeSingVals(col0, diag, perm, singVals, shifts, mus); | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > > >’ 39 | template<typename Derived> class ArrayBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, const Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Array<float, -1, 1> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:804:24: required from ‘void Eigen::BDCSVD<MatrixType>::computeSingVals(const ArrayRef&, const ArrayRef&, const IndicesRef&, VectorType&, ArrayRef, ArrayRef) [with _MatrixType = Eigen::Matrix<float, -1, -1>; ArrayRef = Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >; IndicesRef = Eigen::Ref<Eigen::Array<long int, 1, -1> >; VectorType = Eigen::Matrix<float, -1, 1>]’ 804 | diagShifted = diag - shift; | ~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:636:3: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 636 | computeSingVals(col0, diag, perm, singVals, shifts, mus); | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false, false>’ 172 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel, bool HasDirectAccess> class BlockImpl_dense | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false, Eigen::Dense>’ 154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<const Eigen::CwiseNullaryOp<Eigen::internal::scalar_identity_op<float>, Eigen::Matrix<float, -1, -1> >, -1, 1, false>’ 103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:1076:34: required from ‘void Eigen::BDCSVD<MatrixType>::computeSingVecs(const ArrayRef&, const ArrayRef&, const IndicesRef&, const VectorType&, const ArrayRef&, const ArrayRef&, MatrixXr&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; ArrayRef = Eigen::Ref<Eigen::Array<float, -1, 1>, 0, Eigen::InnerStride<1> >; IndicesRef = Eigen::Ref<Eigen::Array<long int, 1, -1> >; VectorType = Eigen::Matrix<float, -1, 1>; MatrixXr = Eigen::Matrix<float, -1, -1>]’ 1076 | U.col(k) = VectorType::Unit(n+1, k); | ~~~~~~~~~~~~~~~~^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:669:3: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 669 | computeSingVecs(zhat, diag, perm, singVals, shifts, mus, U, V); | ^~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:146:13: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 146 | leftCols(half).swap(rightCols(half).reverse()); | ~~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2>’ 63 | template<typename MatrixType, int Direction> class Reverse | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:146:48: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 146 | leftCols(half).swap(rightCols(half).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:361: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:146:48: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 146 | leftCols(half).swap(rightCols(half).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument ‘Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, -1, true>, 2> >::PacketScalar’ {aka ‘__m128’} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond<PacketScalar,ReversePacket> reverse_packet; | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:150:10: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 150 | col(half).head(half2).swap(col(half).tail(half2).reverse()); | ~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:150:21: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 150 | col(half).head(half2).swap(col(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2>’ 63 | template<typename MatrixType, int Direction> class Reverse | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:150:63: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 150 | col(half).head(half2).swap(col(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:150:63: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 150 | col(half).head(half2).swap(col(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument ‘Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, true>, -1, 1, false>, 2> >::PacketScalar’ {aka ‘__m128’} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond<PacketScalar,ReversePacket> reverse_packet; | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:156:12: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 156 | topRows(half).swap(bottomRows(half).reverse()); | ~~~~~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2>’ 63 | template<typename MatrixType, int Direction> class Reverse | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:156:48: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 156 | topRows(half).swap(bottomRows(half).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:156:48: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 156 | topRows(half).swap(bottomRows(half).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument ‘Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, -1, 1, false>, 2> >::PacketScalar’ {aka ‘__m128’} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond<PacketScalar,ReversePacket> reverse_packet; | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:160:10: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 160 | row(half).head(half2).swap(row(half).tail(half2).reverse()); | ~~~^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:160:21: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 160 | row(half).head(half2).swap(row(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2>’ 63 | template<typename MatrixType, int Direction> class Reverse | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:160:63: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 160 | row(half).head(half2).swap(row(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of ‘class Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:160:63: required from ‘void Eigen::DenseBase<Derived>::reverseInPlace() [with Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 160 | row(half).head(half2).swap(row(half).tail(half2).reverse()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:710:41: required from ‘void Eigen::BDCSVD<MatrixType>::computeSVDofM(Eigen::Index, Eigen::Index, MatrixXr&, VectorType&, MatrixXr&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int; MatrixXr = Eigen::Matrix<float, -1, -1>; VectorType = Eigen::Matrix<float, -1, 1>]’ 710 | singVals.head(actual_n).reverseInPlace(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:558:3: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 558 | computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument ‘Eigen::MatrixBase<Eigen::Reverse<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 1, 1, false>, -1, 1, false>, 2> >::PacketScalar’ {aka ‘__m128’} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond<PacketScalar,ReversePacket> reverse_packet; | ^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, float>’ 1464 | struct unary_evaluator<ArrayWrapper<TArgType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator<const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator<const T> | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:108:50: required from ‘bool Eigen::DenseBase<Derived>::any() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<float, float, Eigen::internal::cmp_NEQ>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >]’ 108 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits<Scalar>::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:375:54: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 375 | if( (A.col(j).head(n1).array()!=Literal(0)).any() ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, float>’ 1464 | struct unary_evaluator<ArrayWrapper<TArgType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator<const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator<const T> | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/BooleanRedux.h:108:50: required from ‘bool Eigen::DenseBase<Derived>::any() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_cmp_op<float, float, Eigen::internal::cmp_NEQ>, const Eigen::ArrayWrapper<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Array<float, -1, 1> > >]’ 108 | && SizeAtCompileTime * (int(Evaluator::CoeffReadCost) + int(NumTraits<Scalar>::AddCost)) <= EIGEN_UNROLLING_LIMIT | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:375:54: required from ‘void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Xpr::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; typename Eigen::NumTraits<typename Xpr::Scalar>::Real = float; typename Xpr::Scalar = float; MatrixXr = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 375 | if( (A.col(j).head(n1).array()!=Literal(0)).any() ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:566:5: required from ‘void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<float, -1, -1>; Eigen::Index = long int]’ 566 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2); | ^~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:294:3: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 294 | divide(0, m_diagSize - 1, 0, 0, 0); | ^~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:390:110: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; Workspace = Eigen::Matrix<float, 1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 390 | typename internal::conditional<Side==OnTheRight, Transpose<SubVectorsType>, SubVectorsType&>::type sub_vecs(sub_vecs1); | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:364:25: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 364 | applyThisOnTheLeft(dst, workspace, inputIsIdentity); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:340:36: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 340 | householderU.applyThisOnTheLeft(m_matrixU); // FIXME this line involves a temporary buffer | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, -1, 1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:82: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; Workspace = Eigen::Matrix<float, 1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:364:25: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 364 | applyThisOnTheLeft(dst, workspace, inputIsIdentity); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:340:36: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 340 | householderU.applyThisOnTheLeft(m_matrixU); // FIXME this line involves a temporary buffer | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Block<const Eigen::Matrix<float, -1, -1>, 1, -1, false> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:410:55: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; Workspace = Eigen::Matrix<float, 1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 410 | .applyHouseholderOnTheLeft(essentialVector(actual_k), m_coeffs.coeff(actual_k), workspace.data()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:364:25: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>; int Side = 2]’ 364 | applyThisOnTheLeft(dst, workspace, inputIsIdentity); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:340:36: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 340 | householderU.applyThisOnTheLeft(m_matrixU); // FIXME this line involves a temporary buffer | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, -1, 1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:399:82: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; Workspace = Eigen::Matrix<float, 1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>; int Side = 1]’ 399 | apply_block_householder_on_the_left(sub_dst, sub_vecs, m_coeffs.segment(k, bs), !m_reverse); | ~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:364:25: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>; int Side = 1]’ 364 | applyThisOnTheLeft(dst, workspace, inputIsIdentity); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:347:36: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 347 | householderV.applyThisOnTheLeft(m_matrixV); // FIXME this line involves a temporary buffer | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<float, -1, -1>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<float, -1, -1>, -1, 1, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:410:55: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, Workspace&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; Workspace = Eigen::Matrix<float, 1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>; int Side = 1]’ 410 | .applyHouseholderOnTheLeft(essentialVector(actual_k), m_coeffs.coeff(actual_k), workspace.data()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/HouseholderSequence.h:364:25: required from ‘void Eigen::HouseholderSequence<VectorsType, CoeffsType, Side>::applyThisOnTheLeft(Dest&, bool) const [with Dest = Eigen::Matrix<float, -1, -1>; VectorsType = const Eigen::Matrix<float, -1, -1>; CoeffsType = const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>; int Side = 1]’ 364 | applyThisOnTheLeft(dst, workspace, inputIsIdentity); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:347:36: required from ‘void Eigen::BDCSVD<MatrixType>::copyUV(const HouseholderU&, const HouseholderV&, const NaiveU&, const NaiveV&) [with HouseholderU = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 1>, 2>; HouseholderV = Eigen::HouseholderSequence<const Eigen::Matrix<float, -1, -1>, const Eigen::Diagonal<const Eigen::Matrix<float, -1, -1>, 0>, 1>; NaiveU = Eigen::Matrix<float, -1, -1>; NaiveV = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 347 | householderV.applyThisOnTheLeft(m_matrixV); // FIXME this line involves a temporary buffer | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:322:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 322 | if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> >, Eigen::internal::IndexBased, float>’ 311 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > > >’ 1384 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, Eigen::internal::IndexBased, float>’ 1464 | struct unary_evaluator<ArrayWrapper<TArgType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > > >’ 90 | struct evaluator : public unary_evaluator<T> | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>; SrcXprType = Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Functor = add_assign_op<float, float>]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>; SrcXprType = Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Functor = Eigen::internal::add_assign_op<float, float>; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>; Src = Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Func = add_assign_op<float, float>]’ 890 | Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>; Src = Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Func = add_assign_op<float, float>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase<Derived>::operator+=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::MatrixWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<Eigen::Transpose<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false> > >, const Eigen::ArrayWrapper<Eigen::Matrix<float, -1, 1> > > >; Derived = Eigen::Diagonal<Eigen::Matrix<float, -1, -1>, 0>]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:120:89: required from here 120 | LHS = iG; LHS.diagonal() += (XX.row(J).transpose().array() * iVe.array()).matrix(); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = float; typename Eigen::internal::traits<T>::Scalar = float]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = float; typename Eigen::internal::traits<T>::Scalar = float]’ 269 | return internal::lpNorm_selector<Derived, p>::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:448:74: required from ‘Eigen::LLT<_MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 448 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:109:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 109 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:542:10: required from ‘const Eigen::LLT<typename Eigen::DenseBase<Derived>::PlainObject> Eigen::MatrixBase<Derived>::llt() const [with Derived = Eigen::Matrix<float, -1, -1>; typename Eigen::DenseBase<Derived>::PlainObject = Eigen::Matrix<float, -1, -1>]’ 542 | return LLT<PlainObject>(derived()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:154:13: required from here 154 | if(A.llt().info()==Eigen::NumericalIssue && deflate>deflateMax){ deflate -= 0.005; | ~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = float; typename Eigen::internal::traits<T>::Scalar = float]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = float; typename Eigen::internal::traits<T>::Scalar = float]’ 269 | return internal::lpNorm_selector<Derived, p>::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:448:125: required from ‘Eigen::LLT<_MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 448 | abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:109:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 109 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:542:10: required from ‘const Eigen::LLT<typename Eigen::DenseBase<Derived>::PlainObject> Eigen::MatrixBase<Derived>::llt() const [with Derived = Eigen::Matrix<float, -1, -1>; typename Eigen::DenseBase<Derived>::PlainObject = Eigen::Matrix<float, -1, -1>]’ 542 | return LLT<PlainObject>(derived()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:154:13: required from here 154 | if(A.llt().info()==Eigen::NumericalIssue && deflate>deflateMax){ deflate -= 0.005; | ~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false> >’ 52 | template<typename MatrixType> class Transpose | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:364:27: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; Scalar = float; Eigen::Index = long int]’ 364 | if(rs>0) A11.adjoint().template triangularView<Upper>().template solveInPlace<OnTheRight>(A21); | ~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:408:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>]’ 408 | { return llt_inplace<typename MatrixType::Scalar, Lower>::blocked(m)==-1; } | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:456:42: required from ‘Eigen::LLT<_MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 456 | bool ok = Traits::inplace_decomposition(m_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:109:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>; int _UpLo = 1]’ 109 | compute(matrix.derived()); | ~~~~~~~^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:542:10: required from ‘const Eigen::LLT<typename Eigen::DenseBase<Derived>::PlainObject> Eigen::MatrixBase<Derived>::llt() const [with Derived = Eigen::Matrix<float, -1, -1>; typename Eigen::DenseBase<Derived>::PlainObject = Eigen::Matrix<float, -1, -1>]’ 542 | return LLT<PlainObject>(derived()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:154:13: required from here 154 | if(A.llt().info()==Eigen::NumericalIssue && deflate>deflateMax){ deflate -= 0.005; | ~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Householder/Householder.h:45:80: required from ‘void Eigen::MatrixBase<Derived>::makeHouseholderInPlace(Scalar&, RealScalar&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, 1, true>, -1, 1, false>; Scalar = float; RealScalar = float]’ 45 | VectorBlock<Derived, internal::decrement_size<Base::SizeAtCompileTime>::ret> essentialPart(derived(), 1, size()-1); | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:363:59: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, CoeffVectorType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 363 | matA.col(i).tail(remainingSize).makeHouseholderInPlace(h, beta); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:449:31: required from ‘static void Eigen::internal::tridiagonalization_inplace_selector<MatrixType, Size, IsComplex>::run(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; MatrixType = Eigen::Matrix<float, -1, -1>; int Size = -1; bool IsComplex = false; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 449 | tridiagonalization_inplace(mat, hCoeffs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/Tridiagonalization.h:434:55: required from ‘void Eigen::internal::tridiagonalization_inplace(MatrixType&, DiagonalType&, SubDiagonalType&, CoeffVectorType&, bool) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagonalType = Eigen::Matrix<float, -1, 1>; SubDiagonalType = Eigen::Matrix<float, -1, 1>; CoeffVectorType = Eigen::Matrix<float, -1, 1>]’ 434 | tridiagonalization_inplace_selector<MatrixType>::run(mat, diag, subdiag, hcoeffs, extractQ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:458:39: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 458 | internal::tridiagonalization_inplace(mat, diag, m_subdiag, m_hcoeffs, computeEigenvectors); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:475:5: required from ‘void Eigen::internal::apply_rotation_in_the_plane(Eigen::DenseBase<Derived>&, Eigen::DenseBase<Derived>&, const Eigen::JacobiRotation<OtherScalar>&) [with VectorX = Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>; VectorY = Eigen::Block<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >, -1, 1, true>; OtherScalar = float]’ 475 | EIGEN_PLAIN_ENUM_MIN(evaluator<VectorX>::Alignment, evaluator<VectorY>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Jacobi/Jacobi.h:315:40: required from ‘void Eigen::MatrixBase<Derived>::applyOnTheRight(Eigen::Index, Eigen::Index, const Eigen::JacobiRotation<OtherScalar>&) [with OtherScalar = float; Derived = Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’ 315 | internal::apply_rotation_in_the_plane(x, y, j.transpose()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:895:24: required from ‘void Eigen::internal::tridiagonal_qr_step(RealScalar*, RealScalar*, Index, Index, Scalar*, Index) [with int StorageOrder = 0; RealScalar = float; Scalar = float; Index = long int]’ 895 | q.applyOnTheRight(k,k+1,rot); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:548:87: required from ‘Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagType = Eigen::Matrix<float, -1, 1>; SubDiagType = Eigen::Matrix<float, -1, 1>; Eigen::Index = long int]’ 548 | internal::tridiagonal_qr_step<MatrixType::Flags&RowMajorBit ? RowMajor : ColMajor>(diag.data(), subdiag.data(), start, end, computeEigenvectors ? eivec.data() : (Scalar*)0, n); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:460:49: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 460 | m_info = internal::computeFromTridiagonal_impl(diag, m_subdiag, m_maxIterations, computeEigenvectors, m_eivec); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false> >’ 79 | CoeffReadCost = internal::evaluator<XprType>::CoeffReadCost | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase<Derived>::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor<Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>, 0>; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Visitor.h:323:14: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::minCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long int; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>; typename Eigen::internal::traits<T>::Scalar = float]’ 323 | this->visit(minVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:496:37: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::minCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, false>; typename Eigen::internal::traits<T>::Scalar = float]’ 496 | return minCoeff<PropagateFast>(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:563:35: required from ‘Eigen::ComputationInfo Eigen::internal::computeFromTridiagonal_impl(DiagType&, SubDiagType&, Eigen::Index, bool, MatrixType&) [with MatrixType = Eigen::Matrix<float, -1, -1>; DiagType = Eigen::Matrix<float, -1, 1>; SubDiagType = Eigen::Matrix<float, -1, 1>; Eigen::Index = long int]’ 563 | diag.segment(i,n-i).minCoeff(&k); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:460:49: required from ‘Eigen::SelfAdjointEigenSolver<MatrixType>& Eigen::SelfAdjointEigenSolver<_MatrixType>::compute(const Eigen::EigenBase<OtherDerived>&, int) [with InputType = Eigen::Matrix<float, -1, -1>; _MatrixType = Eigen::Matrix<float, -1, -1>]’ 460 | m_info = internal::computeFromTridiagonal_impl(diag, m_subdiag, m_maxIterations, computeEigenvectors, m_eivec); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:156:19: required from here 156 | EVDofA.compute(A); | ~~~~~~~~~~~~~~^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Matrix<float, -1, 1>; Eigen::Index = long int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Matrix<float, -1, 1>; Func = Eigen::internal::scalar_min_op<float, float, 0>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Matrix<float, -1, 1> >; Scalar = float]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_min_op<float, float, 0>; Derived = Eigen::Matrix<float, -1, 1>; typename Eigen::internal::traits<T>::Scalar = float]’ 418 | return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:433:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::minCoeff() const [with int NaNPropagation = 0; Derived = Eigen::Matrix<float, -1, 1>; typename Eigen::internal::traits<T>::Scalar = float]’ 433 | return derived().redux(Eigen::internal::scalar_min_op<Scalar,Scalar, NaNPropagation>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:463:37: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::minCoeff() const [with Derived = Eigen::Matrix<float, -1, 1>; typename Eigen::internal::traits<T>::Scalar = float]’ 463 | return minCoeff<PropagateFast>(); | ~~~~~~~~~~~~~~~~~~~~~~~^~ GWAS.cpp:157:43: required from here 157 | MinDVb = EVDofA.eigenvalues().minCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:46:19: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation<RealScalar>*, Eigen::JacobiRotation<RealScalar>*) [with MatrixType = Eigen::Matrix<float, -1, -1>; RealScalar = float; Index = long int]’ 46 | m.applyOnTheLeft(0,1,rot1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 2>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false> >’ 179 | typedef typename internal::find_best_packet<Scalar,SizeAtCompileTime>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<float, 2, 2>, 1, 2, false>, 1>’ 223 | template<typename Derived> class MapBase<Derived, WriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<float, 2, 2>, 1, 2, false, true>’ 329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/misc/RealSvd2x2.h:46:19: required from ‘void Eigen::internal::real_2x2_jacobi_svd(const MatrixType&, Index, Index, Eigen::JacobiRotation<RealScalar>*, Eigen::JacobiRotation<RealScalar>*) [with MatrixType = Eigen::Matrix<float, -1, -1>; RealScalar = float; Index = long int]’ 46 | m.applyOnTheLeft(0,1,rot1); | ~~~~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:730:42: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>& Eigen::JacobiSVD<MatrixType, QRPreconditioner>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 730 | internal::real_2x2_jacobi_svd(m_workMatrix, p, q, &j_left, &j_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/JacobiSVD.h:549:14: required from ‘Eigen::JacobiSVD<MatrixType, QRPreconditioner>::JacobiSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; int QRPreconditioner = 2; MatrixType = Eigen::Matrix<float, -1, -1>]’ 549 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:259:27: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 259 | JacobiSVD<MatrixType> jsvd(matrix,computationOptions); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >; Eigen::Index = long int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >; Func = Eigen::internal::scalar_max_op<float, float, 1>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> > >; Scalar = float]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op<float, float, 1>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >; typename Eigen::internal::traits<T>::Scalar = float]’ 418 | return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:448:25: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::maxCoeff() const [with int NaNPropagation = 1; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<float>, const Eigen::Matrix<float, -1, -1> >; typename Eigen::internal::traits<T>::Scalar = float]’ 448 | return derived().redux(Eigen::internal::scalar_max_op<Scalar,Scalar, NaNPropagation>()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:272:71: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 272 | RealScalar scale = matrix.cwiseAbs().template maxCoeff<PropagateNaN>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:268:7: required from ‘Eigen::MapBase<Derived, 1>::ScalarWithConstIfNotLvalue& Eigen::MapBase<Derived, 1>::coeffRef(Eigen::Index) [with Derived = Eigen::Block<Eigen::Matrix<float, 2, -1, 1, 2, -1>, 1, -1, false>; ScalarWithConstIfNotLvalue = float; Eigen::Index = long int]’ 15 | EIGEN_STATIC_ASSERT((int(internal::evaluator<Derived>::Flags) & LinearAccessBit) || Derived::IsVectorAtCompileTime, \ | ^~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:339:92: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 339 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:338:47: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 338 | upperbidiagonalization_inplace_unblocked(B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ 339 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 | X.data() | ~~~~~~~~ 342 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:338:47: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 338 | upperbidiagonalization_inplace_unblocked(B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ 339 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 | X.data() | ~~~~~~~~ 342 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:338:47: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 338 | upperbidiagonalization_inplace_unblocked(B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ 339 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 | X.data() | ~~~~~~~~ 342 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, -1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:181:16: required from ‘void Eigen::internal::upperbidiagonalization_blocked_helper(MatrixType&, typename MatrixType::RealScalar*, typename MatrixType::RealScalar*, Eigen::Index, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >) [with MatrixType = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>; typename MatrixType::RealScalar = float; Eigen::Index = long int; typename MatrixType::Scalar = float; typename conditional<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)>::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::OuterStride<>]’ 181 | SubMatType X_k1( X.block(k,0, remainingRows,k) ); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:182:16: required from ‘void Eigen::internal::upperbidiagonalization_blocked_helper(MatrixType&, typename MatrixType::RealScalar*, typename MatrixType::RealScalar*, Eigen::Index, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >) [with MatrixType = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>; typename MatrixType::RealScalar = float; Eigen::Index = long int; typename MatrixType::Scalar = float; typename conditional<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)>::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::OuterStride<>]’ 182 | SubMatType V_k1( A.block(k,0, remainingRows,k) ); | ^~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase<Derived, DirectAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> > >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> > >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, Eigen::Block<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl<Lhs,Rhs,Option,Dense> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase<Derived, DirectWriteAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 41 | template<typename Derived> class DenseBase | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 48 | template<typename Derived> class MatrixBase | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’ 37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator<ArgType>::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:203:23: required from ‘void Eigen::internal::upperbidiagonalization_blocked_helper(MatrixType&, typename MatrixType::RealScalar*, typename MatrixType::RealScalar*, Eigen::Index, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >) [with MatrixType = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>; typename MatrixType::RealScalar = float; Eigen::Index = long int; typename MatrixType::Scalar = float; typename conditional<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)>::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::OuterStride<>]’ 203 | SubColumnType y_k( Y.col(k).tail(remainingCols) ); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>& Eigen::internal::UpperBidiagonalization<_MatrixType>::compute(const _MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>]’ 391 | upperbidiagonalization_inplace_blocked(m_householder, m_bidiagonal); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:61:7: required from ‘Eigen::internal::UpperBidiagonalization<_MatrixType>::UpperBidiagonalization(const MatrixType&) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 61 | compute(matrix); | ^~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:286:45: required from ‘Eigen::BDCSVD<_MatrixType>& Eigen::BDCSVD<MatrixType>::compute(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 286 | internal::UpperBidiagonalization<MatrixX> bid(copy); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:143:12: required from ‘Eigen::BDCSVD<MatrixType>::BDCSVD(const MatrixType&, unsigned int) [with _MatrixType = Eigen::Matrix<float, -1, -1>; MatrixType = Eigen::Matrix<float, -1, -1>]’ 143 | compute(matrix, computationOptions); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ GWAS.cpp:49:85: required from here 49 | Eigen::BDCSVD<Eigen::MatrixXf> svd(GEN, Eigen::ComputeThinU | Eigen::ComputeThinV ); | ^ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment, | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 44 | DerivedAlignment = int(evaluator<Derived>::Alignment), | ^~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template<class Derived> Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase<Derived>&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits<Eigen::Ref<Eigen::Matrix<float, -1, 1>, 0, Eigen::InnerStride<1> > >::match<Derived>::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block<Eigen::Block<Eigen::Ref<Eigen::Matrix<float, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>]’ 288 | typename internal::enable_if<bool(Traits::template match<Derived>::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:203:23: required from ‘void Eigen::internal::upperbidiagonalization_blocked_helper(MatrixType&, typename MatrixType::RealScalar*, typename MatrixType::RealScalar*, Eigen::Index, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >, Eigen::Ref<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)> >) [with MatrixType = Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>; typename MatrixType::RealScalar = float; Eigen::Index = long int; typename MatrixType::Scalar = float; typename conditional<Eigen::Matrix<typename MatrixType::Scalar, -1, -1, (traits<T>::Flags & Eigen::RowMajorBit)>::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::OuterStride<>]’ 203 | SubColumnType y_k( Y.col(k).tail(remainingCols) ); | ^~~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:347:55: required from ‘void Eigen::internal::upperbidiagonalization_inplace_blocked(MatrixType&, BidiagType&, Eigen::Index, typename MatrixType::Scalar*) [with MatrixType = Eigen::Matrix<float, -1, -1>; BidiagType = BandMatrix<float, -1, -1, 1, 0, 1>; Eigen::Index = long int; typename MatrixType::Scalar = float]’ 347 | upperbidiagonalization_blocked_helper<BlockType>( B, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ 348 | &(bidiagonal.template diagonal<0>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | &(bidiagonal.template diagonal<1>().coeffRef(k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | bs, | ~~~ 351 | X.topLeftCorner(brows,bs), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | Y.topLeftCorner(bcols,bs) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ); | ~ /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SVD/UpperBidiagonalization.h:391:41: required from â€