- using R Under development (unstable) (2025-12-04 r89100)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-9) 15.2.0
GNU Fortran (Debian 15.2.0-9) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘mantar/DESCRIPTION’ ... OK
- this is package ‘mantar’ version ‘0.1.0’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/1s] OK
- checking package namespace information ... OK
- checking package dependencies ... INFO
Packages suggested but not available for checking: 'mice', 'qgraph'
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘mantar’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [2s/2s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [1s/1s] ERROR
Running ‘testthat.R’ [1s/1s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mantar)
>
> test_check("mantar")
No missing values in data. Sample size for each variable is equal to the number of rows in the data.
No missing values in data. Sample size for each variable is equal to the number of rows in the data.
Both 'data' and 'mat' provided. 'data' will be used.
No missing values in data. Sample size for each variable is equal to the number of rows in the data.
Saving _problems/test-search_regression-36.R
Both 'data' and 'mat' provided. 'data' will be used.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 37 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-search_regression.R:31:3'): regression_opt() works with data with stacked MI missingness and BIC ──
Error: Package "mice" must be installed to use this function.
Backtrace:
▆
1. └─mantar::regression_opt(...) at test-search_regression.R:31:3
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 37 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [3s/2s] OK
- checking HTML version of manual ... [0s/0s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR