• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 15:54:00 UTC
• checking for file ‘longmixr/DESCRIPTION’ ... OK
• this is package ‘longmixr’ version ‘1.0.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘longmixr’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/9s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [14s/18s] OK   Running ‘testthat.R’ [14s/18s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [62s/81s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp01yYbQ’ ‘~/tmp/scratch/Rtmp0gcf9C’   ‘~/tmp/scratch/Rtmp19PtpI’ ‘~/tmp/scratch/Rtmp1AgFGb’   ‘~/tmp/scratch/Rtmp1I4BQC’ ‘~/tmp/scratch/Rtmp26Vaed’   ‘~/tmp/scratch/Rtmp2KvTdm’ ‘~/tmp/scratch/Rtmp2kFNO9’   ‘~/tmp/scratch/Rtmp3jrYbk’ ‘~/tmp/scratch/Rtmp3rlnSc’   ‘~/tmp/scratch/Rtmp4l8LkC’ ‘~/tmp/scratch/Rtmp4zqFrQ’   ‘~/tmp/scratch/Rtmp5kuP9K’ ‘~/tmp/scratch/Rtmp6TlVnm’   ‘~/tmp/scratch/Rtmp6rxwtY’ ‘~/tmp/scratch/Rtmp7FjBuy’   ‘~/tmp/scratch/Rtmp7Gbp6P’ ‘~/tmp/scratch/Rtmp80MCZn’   ‘~/tmp/scratch/Rtmp82bWVa’ ‘~/tmp/scratch/Rtmp8EWGNv’   ‘~/tmp/scratch/Rtmp8OBmrO’ ‘~/tmp/scratch/Rtmp8hbU8Q’   ‘~/tmp/scratch/Rtmp9neVeq’ ‘~/tmp/scratch/RtmpAPpZxJ’   ‘~/tmp/scratch/RtmpAYXAuB’ ‘~/tmp/scratch/RtmpAZTQkj’   ‘~/tmp/scratch/RtmpAxCWeb’ ‘~/tmp/scratch/RtmpBeXRXd’   ‘~/tmp/scratch/RtmpCDcvAq’ ‘~/tmp/scratch/RtmpCd59kw’   ‘~/tmp/scratch/RtmpCeO9y6’ ‘~/tmp/scratch/RtmpCnjd73’   ‘~/tmp/scratch/RtmpDeafFU’ ‘~/tmp/scratch/RtmpECcfXZ’   ‘~/tmp/scratch/RtmpEiTWEJ’ ‘~/tmp/scratch/RtmpFUkOmT’   ‘~/tmp/scratch/RtmpFr0g8S’ ‘~/tmp/scratch/RtmpG6IQSv’   ‘~/tmp/scratch/RtmpGIl8iX’ ‘~/tmp/scratch/RtmpGUG3Ry’   ‘~/tmp/scratch/RtmpGskO3l’ ‘~/tmp/scratch/RtmpGxe83g’   ‘~/tmp/scratch/RtmpGzjUC9’ ‘~/tmp/scratch/RtmpHBfkhQ’   ‘~/tmp/scratch/RtmpHCUBeX’ ‘~/tmp/scratch/RtmpHHVJmx’   ‘~/tmp/scratch/RtmpHbcXFd’ ‘~/tmp/scratch/RtmpI3mMxo’   ‘~/tmp/scratch/RtmpI5Sg8Z’ ‘~/tmp/scratch/RtmpIetPJ6’   ‘~/tmp/scratch/RtmpIq2taw’ ‘~/tmp/scratch/RtmpJ8T4l4’   ‘~/tmp/scratch/RtmpJCC7Eb’ ‘~/tmp/scratch/RtmpJh0nR5’   ‘~/tmp/scratch/RtmpK79JsX’ ‘~/tmp/scratch/RtmpLu5TQ1’   ‘~/tmp/scratch/RtmpMHZnNW’ ‘~/tmp/scratch/RtmpMMw4xI’   ‘~/tmp/scratch/RtmpNAZRj3’ ‘~/tmp/scratch/RtmpNPD6uf’   ‘~/tmp/scratch/RtmpNvOUQ9’ ‘~/tmp/scratch/RtmpONFkUO’   ‘~/tmp/scratch/RtmpOStT6K’ ‘~/tmp/scratch/RtmpOv1Rb6’   ‘~/tmp/scratch/RtmpP8KLkS’ ‘~/tmp/scratch/RtmpQBbmhH’   ‘~/tmp/scratch/RtmpQJK7cJ’ ‘~/tmp/scratch/RtmpQPL3LQ’   ‘~/tmp/scratch/RtmpQcJdMz’ ‘~/tmp/scratch/RtmpQiC9UF’   ‘~/tmp/scratch/RtmpR6LBXY’ ‘~/tmp/scratch/RtmpRx923C’   ‘~/tmp/scratch/RtmpT6PT03’ ‘~/tmp/scratch/RtmpTCNg2B’   ‘~/tmp/scratch/RtmpU3paJR’ ‘~/tmp/scratch/RtmpU7odI2’   ‘~/tmp/scratch/RtmpUNb5yX’ ‘~/tmp/scratch/RtmpUeXUZj’   ‘~/tmp/scratch/RtmpUje6Ui’ ‘~/tmp/scratch/RtmpUnV4mr’   ‘~/tmp/scratch/RtmpVZu7UK’ ‘~/tmp/scratch/RtmpWf86hO’   ‘~/tmp/scratch/RtmpXDixE0’ ‘~/tmp/scratch/RtmpXHvep6’   ‘~/tmp/scratch/RtmpXJ6eKB’ ‘~/tmp/scratch/RtmpYAG17M’   ‘~/tmp/scratch/RtmpYTanV5’ ‘~/tmp/scratch/RtmpYcURi4’   ‘~/tmp/scratch/RtmpYkJcR8’ ‘~/tmp/scratch/RtmpZEUqvc’   ‘~/tmp/scratch/RtmpZNxWqp’ ‘~/tmp/scratch/RtmpZRF180’   ‘~/tmp/scratch/RtmpZRdyMx’ ‘~/tmp/scratch/RtmpZaGJjC’   ‘~/tmp/scratch/Rtmpa0Yfhy’ ‘~/tmp/scratch/Rtmpb0ZQGz’   ‘~/tmp/scratch/RtmpbJ1MHl’ ‘~/tmp/scratch/RtmpbU5F2V’   ‘~/tmp/scratch/RtmpboMmEK’ ‘~/tmp/scratch/RtmpcEZErZ’   ‘~/tmp/scratch/RtmpcjlgOr’ ‘~/tmp/scratch/RtmpcuThKy’   ‘~/tmp/scratch/Rtmpd9F4VN’ ‘~/tmp/scratch/RtmpdxhxHX’   ‘~/tmp/scratch/RtmpeEIcDp’ ‘~/tmp/scratch/RtmpeWQUfg’   ‘~/tmp/scratch/RtmpeY18z6’ ‘~/tmp/scratch/RtmpecoPHN’   ‘~/tmp/scratch/RtmpedTzHy’ ‘~/tmp/scratch/RtmpfQtuGC’   ‘~/tmp/scratch/Rtmpfn5yiI’ ‘~/tmp/scratch/Rtmpfys1Jd’   ‘~/tmp/scratch/RtmpgHvZcp’ ‘~/tmp/scratch/Rtmpgvs7Ol’   ‘~/tmp/scratch/Rtmph7ARYC’ ‘~/tmp/scratch/Rtmph8G6gR’   ‘~/tmp/scratch/Rtmph8RIhW’ ‘~/tmp/scratch/RtmphA6Bdk’   ‘~/tmp/scratch/RtmphG1wSS’ ‘~/tmp/scratch/RtmphI7ML8’   ‘~/tmp/scratch/Rtmpi1pwlv’ ‘~/tmp/scratch/RtmpiP9vLP’   ‘~/tmp/scratch/RtmpjDC8UQ’ ‘~/tmp/scratch/RtmpjEac0x’   ‘~/tmp/scratch/RtmpjvJbJC’ ‘~/tmp/scratch/RtmpjxRdFj’   ‘~/tmp/scratch/Rtmpk8j9ig’ ‘~/tmp/scratch/Rtmpkrj7sb’   ‘~/tmp/scratch/RtmpldI64n’ ‘~/tmp/scratch/Rtmpm1lzqi’   ‘~/tmp/scratch/RtmpnYosO4’ ‘~/tmp/scratch/RtmpnyC4Li’   ‘~/tmp/scratch/Rtmpo6JrFn’ ‘~/tmp/scratch/RtmpoWt9ZQ’   ‘~/tmp/scratch/RtmpoZPD98’ ‘~/tmp/scratch/RtmpoyKW4Y’   ‘~/tmp/scratch/RtmppPoWKh’ ‘~/tmp/scratch/RtmpquBFAJ’   ‘~/tmp/scratch/RtmprHCV01’ ‘~/tmp/scratch/RtmpsGcfim’   ‘~/tmp/scratch/RtmpsIb9Hp’ ‘~/tmp/scratch/Rtmpswkiz9’   ‘~/tmp/scratch/Rtmpt8JCxg’ ‘~/tmp/scratch/RtmptQt26j’   ‘~/tmp/scratch/RtmpvMRUpQ’ ‘~/tmp/scratch/RtmpvXfkkc’   ‘~/tmp/scratch/Rtmpvocirz’ ‘~/tmp/scratch/RtmpwKJzC2’   ‘~/tmp/scratch/RtmpwnfNsv’ ‘~/tmp/scratch/RtmpwxHyYF’   ‘~/tmp/scratch/Rtmpx5NuFB’ ‘~/tmp/scratch/RtmpxivBWj’   ‘~/tmp/scratch/Rtmpy2e9T4’ ‘~/tmp/scratch/RtmpyRKMrw’   ‘~/tmp/scratch/RtmpylGqao’ ‘~/tmp/scratch/RtmpyyJrjg’   ‘~/tmp/scratch/Rtmpz9Kgys’ ‘~/tmp/scratch/RtmpzZ7EJ6’   ‘~/tmp/scratch/ccjUg4CD.s’ ‘~/tmp/scratch/xvfb-run.08K13c’   ‘~/tmp/scratch/xvfb-run.0pTBrS’ ‘~/tmp/scratch/xvfb-run.18Ctvl’   ‘~/tmp/scratch/xvfb-run.4VxwlA’ ‘~/tmp/scratch/xvfb-run.54oq75’   ‘~/tmp/scratch/xvfb-run.5559je’ ‘~/tmp/scratch/xvfb-run.6C9oEc’   ‘~/tmp/scratch/xvfb-run.80EQnd’ ‘~/tmp/scratch/xvfb-run.9YmVaP’   ‘~/tmp/scratch/xvfb-run.Boe2c8’ ‘~/tmp/scratch/xvfb-run.CDGTb9’   ‘~/tmp/scratch/xvfb-run.CKEPqQ’ ‘~/tmp/scratch/xvfb-run.CuA7V4’   ‘~/tmp/scratch/xvfb-run.CyU11s’ ‘~/tmp/scratch/xvfb-run.GoA3gi’   ‘~/tmp/scratch/xvfb-run.Hg13M0’ ‘~/tmp/scratch/xvfb-run.JM0hyB’   ‘~/tmp/scratch/xvfb-run.JMOydQ’ ‘~/tmp/scratch/xvfb-run.JnoVTu’   ‘~/tmp/scratch/xvfb-run.KKDSw4’ ‘~/tmp/scratch/xvfb-run.KZrx3r’   ‘~/tmp/scratch/xvfb-run.MV0CEP’ ‘~/tmp/scratch/xvfb-run.MvZbQz’   ‘~/tmp/scratch/xvfb-run.NRWH8N’ ‘~/tmp/scratch/xvfb-run.NXG5sP’   ‘~/tmp/scratch/xvfb-run.OfsRFx’ ‘~/tmp/scratch/xvfb-run.PdHtLM’   ‘~/tmp/scratch/xvfb-run.QAiWz7’ ‘~/tmp/scratch/xvfb-run.QKyoI4’   ‘~/tmp/scratch/xvfb-run.Qnr6A6’ ‘~/tmp/scratch/xvfb-run.QpPoW4’   ‘~/tmp/scratch/xvfb-run.RuHq3q’ ‘~/tmp/scratch/xvfb-run.RxauR4’   ‘~/tmp/scratch/xvfb-run.T9zwWA’ ‘~/tmp/scratch/xvfb-run.TRHfHA’   ‘~/tmp/scratch/xvfb-run.TaHyZe’ ‘~/tmp/scratch/xvfb-run.U7o5HY’   ‘~/tmp/scratch/xvfb-run.VGqYl9’ ‘~/tmp/scratch/xvfb-run.VtS8Zz’   ‘~/tmp/scratch/xvfb-run.Wp6bfT’ ‘~/tmp/scratch/xvfb-run.YmCzpk’   ‘~/tmp/scratch/xvfb-run.b6f9Pp’ ‘~/tmp/scratch/xvfb-run.behGaE’   ‘~/tmp/scratch/xvfb-run.bp0Sti’ ‘~/tmp/scratch/xvfb-run.dJOCxu’   ‘~/tmp/scratch/xvfb-run.dSizhK’ ‘~/tmp/scratch/xvfb-run.dr8mxv’   ‘~/tmp/scratch/xvfb-run.e3c2mW’ ‘~/tmp/scratch/xvfb-run.ew6hZB’   ‘~/tmp/scratch/xvfb-run.gHTlsy’ ‘~/tmp/scratch/xvfb-run.gUMpUC’   ‘~/tmp/scratch/xvfb-run.giEttV’ ‘~/tmp/scratch/xvfb-run.gsGCCR’   ‘~/tmp/scratch/xvfb-run.hlMyVK’ ‘~/tmp/scratch/xvfb-run.jNOHah’   ‘~/tmp/scratch/xvfb-run.kxDTtQ’ ‘~/tmp/scratch/xvfb-run.lK3brD’   ‘~/tmp/scratch/xvfb-run.lTbvek’ ‘~/tmp/scratch/xvfb-run.lW2iVk’   ‘~/tmp/scratch/xvfb-run.lk2Ryl’ ‘~/tmp/scratch/xvfb-run.m9IIEw’   ‘~/tmp/scratch/xvfb-run.ojNcFC’ ‘~/tmp/scratch/xvfb-run.okpKAd’   ‘~/tmp/scratch/xvfb-run.rN8jl2’ ‘~/tmp/scratch/xvfb-run.t8tYEh’   ‘~/tmp/scratch/xvfb-run.vFaSI2’ ‘~/tmp/scratch/xvfb-run.yGYYLI’   ‘~/tmp/scratch/xvfb-run.yZe8vJ’ ‘~/tmp/scratch/xvfb-run.ykfWk0’   ‘~/tmp/scratch/xvfb-run.zEcOeI’
• DONE

Status: 1 NOTE