• using R Under development (unstable) (2026-08-01 r90334)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-02 15:48:57 UTC
• checking for file ‘limorhyde2/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘limorhyde2’ version ‘0.1.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘limorhyde2’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [22s/30s] OK Examples with CPU (user + system) or elapsed time > 5s                     user system elapsed getDiffRhythmStats 4.067 0.215 5.66
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [19s/21s] OK   Running ‘testthat.R’ [19s/21s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [38s/45s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0u1LHZ’ ‘~/tmp/scratch/Rtmp103n5i’   ‘~/tmp/scratch/Rtmp1IKzFJ’ ‘~/tmp/scratch/Rtmp1QOl3I’   ‘~/tmp/scratch/Rtmp1uqb8f’ ‘~/tmp/scratch/Rtmp2cPFUP’   ‘~/tmp/scratch/Rtmp2oJViJ’ ‘~/tmp/scratch/Rtmp3KqAKG’   ‘~/tmp/scratch/Rtmp4Jspej’ ‘~/tmp/scratch/Rtmp4NJJNK’   ‘~/tmp/scratch/Rtmp4NemIb’ ‘~/tmp/scratch/Rtmp5LF72p’   ‘~/tmp/scratch/Rtmp5UjTsF’ ‘~/tmp/scratch/Rtmp5ccprx’   ‘~/tmp/scratch/Rtmp5sUosl’ ‘~/tmp/scratch/Rtmp5ss7lu’   ‘~/tmp/scratch/Rtmp5xXvDZ’ ‘~/tmp/scratch/Rtmp7L6J8Q’   ‘~/tmp/scratch/Rtmp7qeE5w’ ‘~/tmp/scratch/Rtmp7xHl94’   ‘~/tmp/scratch/Rtmp83cogr’ ‘~/tmp/scratch/Rtmp8Chvnf’   ‘~/tmp/scratch/Rtmp8GBZ7Q’ ‘~/tmp/scratch/Rtmp8KEHVZ’   ‘~/tmp/scratch/Rtmp9ArRku’ ‘~/tmp/scratch/Rtmp9qE34x’   ‘~/tmp/scratch/RtmpAUcjR9’ ‘~/tmp/scratch/RtmpAl4Rct’   ‘~/tmp/scratch/RtmpBQ1EHT’ ‘~/tmp/scratch/RtmpBUrbCM’   ‘~/tmp/scratch/RtmpBmgosT’ ‘~/tmp/scratch/RtmpDqSrFd’   ‘~/tmp/scratch/RtmpDzaBXo’ ‘~/tmp/scratch/RtmpE9ApK3’   ‘~/tmp/scratch/RtmpEAB285’ ‘~/tmp/scratch/RtmpEyOoSo’   ‘~/tmp/scratch/RtmpGiZlBu’ ‘~/tmp/scratch/RtmpGuH2Xg’   ‘~/tmp/scratch/RtmpH89dtg’ ‘~/tmp/scratch/RtmpHGhFqS’   ‘~/tmp/scratch/RtmpI5EBGe’ ‘~/tmp/scratch/RtmpIgcal3’   ‘~/tmp/scratch/RtmpIm2Hv7’ ‘~/tmp/scratch/RtmpJWnT45’   ‘~/tmp/scratch/RtmpJmhs0U’ ‘~/tmp/scratch/RtmpKAfxTN’   ‘~/tmp/scratch/RtmpKIJgM0’ ‘~/tmp/scratch/RtmpKh6034’   ‘~/tmp/scratch/RtmpL64Pa8’ ‘~/tmp/scratch/RtmpLV6IB7’   ‘~/tmp/scratch/RtmpLoJUzI’ ‘~/tmp/scratch/RtmpLuMOQa’   ‘~/tmp/scratch/RtmpMIKd9s’ ‘~/tmp/scratch/RtmpMW5Qdb’   ‘~/tmp/scratch/RtmpMp9zvZ’ ‘~/tmp/scratch/RtmpOYUDt4’   ‘~/tmp/scratch/RtmpP6WTbr’ ‘~/tmp/scratch/RtmpPIuNGj’   ‘~/tmp/scratch/RtmpPWGbLm’ ‘~/tmp/scratch/RtmpPtGQBx’   ‘~/tmp/scratch/RtmpQ00nP3’ ‘~/tmp/scratch/RtmpQMr0xL’   ‘~/tmp/scratch/RtmpQts6Qu’ ‘~/tmp/scratch/RtmpR5RqD5’   ‘~/tmp/scratch/RtmpRW4eKf’ ‘~/tmp/scratch/RtmpRb466u’   ‘~/tmp/scratch/RtmpRw6jQi’ ‘~/tmp/scratch/RtmpShTz12’   ‘~/tmp/scratch/RtmpSu5fDm’ ‘~/tmp/scratch/RtmpSuHVN6’   ‘~/tmp/scratch/RtmpTLOFEV’ ‘~/tmp/scratch/RtmpTSdtXw’   ‘~/tmp/scratch/RtmpTSdzLD’ ‘~/tmp/scratch/RtmpTtoUhY’   ‘~/tmp/scratch/RtmpU5aHck’ ‘~/tmp/scratch/RtmpVAE8q4’   ‘~/tmp/scratch/RtmpVTlBgD’ ‘~/tmp/scratch/RtmpVZxJme’   ‘~/tmp/scratch/RtmpVwUIb0’ ‘~/tmp/scratch/RtmpVzSOVp’   ‘~/tmp/scratch/RtmpWlU2MN’ ‘~/tmp/scratch/RtmpXf2Gnl’   ‘~/tmp/scratch/RtmpYVrHEH’ ‘~/tmp/scratch/RtmpYiIkV4’   ‘~/tmp/scratch/RtmpZZMZb7’ ‘~/tmp/scratch/RtmpZtBMqf’   ‘~/tmp/scratch/RtmpZtb749’ ‘~/tmp/scratch/RtmpaCxXaR’   ‘~/tmp/scratch/RtmpaJpVw4’ ‘~/tmp/scratch/Rtmpas4Rph’   ‘~/tmp/scratch/Rtmpat5FJX’ ‘~/tmp/scratch/Rtmpb5S49H’   ‘~/tmp/scratch/RtmpcCWtaL’ ‘~/tmp/scratch/RtmpcUG3Pu’   ‘~/tmp/scratch/RtmpclhwQb’ ‘~/tmp/scratch/Rtmpd26lfH’   ‘~/tmp/scratch/Rtmpd406dG’ ‘~/tmp/scratch/Rtmpdb9F3j’   ‘~/tmp/scratch/RtmpdqSEjM’ ‘~/tmp/scratch/RtmpeQhyTx’   ‘~/tmp/scratch/Rtmpf5DJXP’ ‘~/tmp/scratch/RtmpfYziYz’   ‘~/tmp/scratch/Rtmpg9cVp5’ ‘~/tmp/scratch/RtmpgZTNsN’   ‘~/tmp/scratch/RtmpgiTETE’ ‘~/tmp/scratch/RtmpgmNIZk’   ‘~/tmp/scratch/Rtmpgnxhi4’ ‘~/tmp/scratch/RtmphOdvJ5’   ‘~/tmp/scratch/RtmpjXD5EM’ ‘~/tmp/scratch/Rtmpjl2UTy’   ‘~/tmp/scratch/RtmpkRB2sQ’ ‘~/tmp/scratch/RtmpkotqVa’   ‘~/tmp/scratch/RtmplQZIoA’ ‘~/tmp/scratch/Rtmplvanud’   ‘~/tmp/scratch/Rtmpm12gWY’ ‘~/tmp/scratch/RtmpmHGbfR’   ‘~/tmp/scratch/RtmpmdjmaA’ ‘~/tmp/scratch/RtmpnFwd71’   ‘~/tmp/scratch/Rtmpnopkm8’ ‘~/tmp/scratch/RtmpnpEIz7’   ‘~/tmp/scratch/RtmpoIMp8M’ ‘~/tmp/scratch/Rtmpp204UY’   ‘~/tmp/scratch/RtmppGDkIw’ ‘~/tmp/scratch/Rtmppl5Uqh’   ‘~/tmp/scratch/RtmppmzMTx’ ‘~/tmp/scratch/RtmpqrlL5E’   ‘~/tmp/scratch/Rtmpr9fYAv’ ‘~/tmp/scratch/RtmprJxSAK’   ‘~/tmp/scratch/RtmprMPafM’ ‘~/tmp/scratch/Rtmpribdey’   ‘~/tmp/scratch/Rtmps9XJCA’ ‘~/tmp/scratch/RtmpsfUay0’   ‘~/tmp/scratch/RtmpsllLvY’ ‘~/tmp/scratch/Rtmpt3VhaA’   ‘~/tmp/scratch/RtmptcvsN7’ ‘~/tmp/scratch/RtmptuDzQu’   ‘~/tmp/scratch/Rtmptw55GS’ ‘~/tmp/scratch/Rtmpu3MLX8’   ‘~/tmp/scratch/RtmpuWKsgs’ ‘~/tmp/scratch/Rtmpw3ACEM’   ‘~/tmp/scratch/RtmpwAtIyF’ ‘~/tmp/scratch/Rtmpwcbk2M’   ‘~/tmp/scratch/RtmpwkIHir’ ‘~/tmp/scratch/RtmpxBFtqf’   ‘~/tmp/scratch/RtmpxJH4Xp’ ‘~/tmp/scratch/RtmpxUrv61’   ‘~/tmp/scratch/Rtmpy3jd8b’ ‘~/tmp/scratch/RtmpyHdTQE’   ‘~/tmp/scratch/RtmpyY9bcW’ ‘~/tmp/scratch/RtmpyjLRiR’   ‘~/tmp/scratch/RtmpzC2kQy’ ‘~/tmp/scratch/RtmpzRAjCn’   ‘~/tmp/scratch/xvfb-run.1334gu’ ‘~/tmp/scratch/xvfb-run.1JNwBx’   ‘~/tmp/scratch/xvfb-run.28fggN’ ‘~/tmp/scratch/xvfb-run.3LwHGe’   ‘~/tmp/scratch/xvfb-run.3Tds5a’ ‘~/tmp/scratch/xvfb-run.5FlZWX’   ‘~/tmp/scratch/xvfb-run.5i4ia6’ ‘~/tmp/scratch/xvfb-run.79kls7’   ‘~/tmp/scratch/xvfb-run.8qZgl4’ ‘~/tmp/scratch/xvfb-run.AJGKna’   ‘~/tmp/scratch/xvfb-run.Bdc4n3’ ‘~/tmp/scratch/xvfb-run.CKuaCt’   ‘~/tmp/scratch/xvfb-run.Cid2kh’ ‘~/tmp/scratch/xvfb-run.EqK196’   ‘~/tmp/scratch/xvfb-run.F2jKj6’ ‘~/tmp/scratch/xvfb-run.Fivekn’   ‘~/tmp/scratch/xvfb-run.FpdJ3e’ ‘~/tmp/scratch/xvfb-run.FzfvGF’   ‘~/tmp/scratch/xvfb-run.GZRbuS’ ‘~/tmp/scratch/xvfb-run.Gmv9PI’   ‘~/tmp/scratch/xvfb-run.KHSon4’ ‘~/tmp/scratch/xvfb-run.KvRb39’   ‘~/tmp/scratch/xvfb-run.LuoHSf’ ‘~/tmp/scratch/xvfb-run.MVa0nD’   ‘~/tmp/scratch/xvfb-run.NErhnS’ ‘~/tmp/scratch/xvfb-run.NkbzRZ’   ‘~/tmp/scratch/xvfb-run.PsjCY7’ ‘~/tmp/scratch/xvfb-run.Q90LJG’   ‘~/tmp/scratch/xvfb-run.R8RE5j’ ‘~/tmp/scratch/xvfb-run.RLzB9b’   ‘~/tmp/scratch/xvfb-run.U9TP9t’ ‘~/tmp/scratch/xvfb-run.UK8zTV’   ‘~/tmp/scratch/xvfb-run.V8bdBl’ ‘~/tmp/scratch/xvfb-run.VRnrr4’   ‘~/tmp/scratch/xvfb-run.WKTSkY’ ‘~/tmp/scratch/xvfb-run.aFRJA7’   ‘~/tmp/scratch/xvfb-run.aHMrIT’ ‘~/tmp/scratch/xvfb-run.awBEdb’   ‘~/tmp/scratch/xvfb-run.bPEX0U’ ‘~/tmp/scratch/xvfb-run.bwaGoI’   ‘~/tmp/scratch/xvfb-run.eF3e5W’ ‘~/tmp/scratch/xvfb-run.fXDOKO’   ‘~/tmp/scratch/xvfb-run.g7QUrv’ ‘~/tmp/scratch/xvfb-run.gbb1Cq’   ‘~/tmp/scratch/xvfb-run.hM6pwt’ ‘~/tmp/scratch/xvfb-run.i0RDWM’   ‘~/tmp/scratch/xvfb-run.i4nhBq’ ‘~/tmp/scratch/xvfb-run.j3IIOn’   ‘~/tmp/scratch/xvfb-run.jHOvBK’ ‘~/tmp/scratch/xvfb-run.lvrDJW’   ‘~/tmp/scratch/xvfb-run.nQvHZQ’ ‘~/tmp/scratch/xvfb-run.nnyz5u’   ‘~/tmp/scratch/xvfb-run.oCys7G’ ‘~/tmp/scratch/xvfb-run.pCPdRp’   ‘~/tmp/scratch/xvfb-run.pSUr8J’ ‘~/tmp/scratch/xvfb-run.qeAZl3’   ‘~/tmp/scratch/xvfb-run.qgs4MG’ ‘~/tmp/scratch/xvfb-run.rT7fm7’   ‘~/tmp/scratch/xvfb-run.srG2j2’ ‘~/tmp/scratch/xvfb-run.uXd4j0’   ‘~/tmp/scratch/xvfb-run.ucDPwk’ ‘~/tmp/scratch/xvfb-run.wdFgkq’   ‘~/tmp/scratch/xvfb-run.xQQPas’ ‘~/tmp/scratch/xvfb-run.yy9qtB’   ‘~/tmp/scratch/xvfb-run.zT89AR’ ‘~/tmp/scratch/xvfb-run.zzKIWk’
• DONE

Status: 1 NOTE