• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 15:49:58 UTC
• checking for file ‘lilikoi/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘lilikoi’ version ‘2.1.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Lana Garmire <lana.garmire.group@gmail.com>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘lilikoi’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [11s/12s] OK
• checking whether the package can be loaded with stated dependencies ... [10s/13s] OK
• checking whether the package can be unloaded cleanly ... [11s/13s] OK
• checking whether the namespace can be loaded with stated dependencies ... [10s/12s] OK
• checking whether the namespace can be unloaded cleanly ... [11s/13s] OK
• checking loading without being on the library search path ... [10s/13s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [54s/65s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [11s/13s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [2s/2s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0CFT7x’ ‘~/tmp/scratch/Rtmp1O3yVS’   ‘~/tmp/scratch/Rtmp3B3PFS’ ‘~/tmp/scratch/Rtmp3JyRLD’   ‘~/tmp/scratch/Rtmp4TfsaP’ ‘~/tmp/scratch/Rtmp4lLh8e’   ‘~/tmp/scratch/Rtmp4luJeK’ ‘~/tmp/scratch/Rtmp5M5JG2’   ‘~/tmp/scratch/Rtmp5T7uKx’ ‘~/tmp/scratch/Rtmp5k46KL’   ‘~/tmp/scratch/Rtmp5mmQgz’ ‘~/tmp/scratch/Rtmp6D9mRR’   ‘~/tmp/scratch/Rtmp6JU7RL’ ‘~/tmp/scratch/Rtmp6KmlPr’   ‘~/tmp/scratch/Rtmp6M8Ovh’ ‘~/tmp/scratch/Rtmp7R9Xy1’   ‘~/tmp/scratch/Rtmp7S1w9z’ ‘~/tmp/scratch/Rtmp7S7oUu’   ‘~/tmp/scratch/Rtmp7hylTp’ ‘~/tmp/scratch/Rtmp7pZwRk’   ‘~/tmp/scratch/Rtmp7u0dCv’ ‘~/tmp/scratch/Rtmp7wF5gR’   ‘~/tmp/scratch/Rtmp7x8U3w’ ‘~/tmp/scratch/Rtmp98Utjm’   ‘~/tmp/scratch/Rtmp9GfoNa’ ‘~/tmp/scratch/Rtmp9xkK9U’   ‘~/tmp/scratch/RtmpAuexYE’ ‘~/tmp/scratch/RtmpB2VmS6’   ‘~/tmp/scratch/RtmpBBkye1’ ‘~/tmp/scratch/RtmpBrh3Wq’   ‘~/tmp/scratch/RtmpC9DACe’ ‘~/tmp/scratch/RtmpCb5YzQ’   ‘~/tmp/scratch/RtmpD5yX4c’ ‘~/tmp/scratch/RtmpDjiRs2’   ‘~/tmp/scratch/RtmpDxdsl3’ ‘~/tmp/scratch/RtmpENe3J4’   ‘~/tmp/scratch/RtmpEQBgYs’ ‘~/tmp/scratch/RtmpF3hDnC’   ‘~/tmp/scratch/RtmpF7Who8’ ‘~/tmp/scratch/RtmpFGOROC’   ‘~/tmp/scratch/RtmpFaH3kd’ ‘~/tmp/scratch/RtmpG6oqGO’   ‘~/tmp/scratch/RtmpG8B1pf’ ‘~/tmp/scratch/RtmpGm6fPt’   ‘~/tmp/scratch/RtmpH3Kauu’ ‘~/tmp/scratch/RtmpH5pZRy’   ‘~/tmp/scratch/RtmpHKrs3g’ ‘~/tmp/scratch/RtmpHLB8Rp’   ‘~/tmp/scratch/RtmpHj79Xr’ ‘~/tmp/scratch/RtmpIGevNy’   ‘~/tmp/scratch/RtmpIrREiw’ ‘~/tmp/scratch/RtmpJONViQ’   ‘~/tmp/scratch/RtmpJuLStF’ ‘~/tmp/scratch/RtmpJx7YPR’   ‘~/tmp/scratch/RtmpK4ur4U’ ‘~/tmp/scratch/RtmpLQz7Mg’   ‘~/tmp/scratch/RtmpLj3Ahm’ ‘~/tmp/scratch/RtmpLrHTRx’   ‘~/tmp/scratch/RtmpLxjwXm’ ‘~/tmp/scratch/RtmpMIMBsX’   ‘~/tmp/scratch/RtmpMiZ53V’ ‘~/tmp/scratch/RtmpNXqBS0’   ‘~/tmp/scratch/RtmpNgeRO4’ ‘~/tmp/scratch/RtmpNpba5J’   ‘~/tmp/scratch/RtmpOY6k3f’ ‘~/tmp/scratch/RtmpOlnATZ’   ‘~/tmp/scratch/RtmpPBhS7W’ ‘~/tmp/scratch/RtmpPM4mJW’   ‘~/tmp/scratch/RtmpPPlHQU’ ‘~/tmp/scratch/RtmpQgwIb4’   ‘~/tmp/scratch/RtmpQs9tow’ ‘~/tmp/scratch/RtmpR11x5U’   ‘~/tmp/scratch/RtmpRGkBxm’ ‘~/tmp/scratch/RtmpRaLlKp’   ‘~/tmp/scratch/RtmpRxAUzA’ ‘~/tmp/scratch/RtmpSbOlzS’   ‘~/tmp/scratch/RtmpSdtT55’ ‘~/tmp/scratch/RtmpSsc6dG’   ‘~/tmp/scratch/RtmpT446uo’ ‘~/tmp/scratch/RtmpTvWY1U’   ‘~/tmp/scratch/RtmpU9xcKX’ ‘~/tmp/scratch/RtmpUEic1W’   ‘~/tmp/scratch/RtmpUUmIPJ’ ‘~/tmp/scratch/RtmpVHlQj9’   ‘~/tmp/scratch/RtmpVjJMlG’ ‘~/tmp/scratch/RtmpVyU4XJ’   ‘~/tmp/scratch/RtmpWn8uyU’ ‘~/tmp/scratch/RtmpX9Jx6J’   ‘~/tmp/scratch/RtmpXNG87S’ ‘~/tmp/scratch/RtmpXnufOc’   ‘~/tmp/scratch/RtmpY15rtg’ ‘~/tmp/scratch/RtmpZVPsuB’   ‘~/tmp/scratch/RtmpZc7Sq9’ ‘~/tmp/scratch/RtmpaLUbKT’   ‘~/tmp/scratch/Rtmpb84918’ ‘~/tmp/scratch/RtmpbPwNHo’   ‘~/tmp/scratch/Rtmpba8ZRi’ ‘~/tmp/scratch/Rtmpbbzl1z’   ‘~/tmp/scratch/Rtmpbq7SRT’ ‘~/tmp/scratch/RtmpbrpjXV’   ‘~/tmp/scratch/RtmpcCTBan’ ‘~/tmp/scratch/RtmpcHQPRY’   ‘~/tmp/scratch/RtmpcYCG8H’ ‘~/tmp/scratch/Rtmpd3teSx’   ‘~/tmp/scratch/Rtmpdd7iNV’ ‘~/tmp/scratch/Rtmpdkf3pt’   ‘~/tmp/scratch/RtmpeYiPlB’ ‘~/tmp/scratch/RtmpeZqr5Y’   ‘~/tmp/scratch/RtmpfA3qzh’ ‘~/tmp/scratch/RtmpfouviQ’   ‘~/tmp/scratch/Rtmph2sXmB’ ‘~/tmp/scratch/RtmphEWQ35’   ‘~/tmp/scratch/RtmphEwcA7’ ‘~/tmp/scratch/RtmphZ4Hds’   ‘~/tmp/scratch/RtmpiAAjES’ ‘~/tmp/scratch/Rtmpiq0M4F’   ‘~/tmp/scratch/Rtmpj54cLr’ ‘~/tmp/scratch/RtmpjBKTtY’   ‘~/tmp/scratch/RtmpjYAmNK’ ‘~/tmp/scratch/RtmpjZpEGF’   ‘~/tmp/scratch/RtmpjeSWa9’ ‘~/tmp/scratch/RtmpjxYo7u’   ‘~/tmp/scratch/RtmpkQIo5i’ ‘~/tmp/scratch/Rtmpl4N6lT’   ‘~/tmp/scratch/Rtmpl7iU96’ ‘~/tmp/scratch/Rtmpl7zXwb’   ‘~/tmp/scratch/RtmplCTZio’ ‘~/tmp/scratch/RtmplxCej8’   ‘~/tmp/scratch/RtmpmEX6fl’ ‘~/tmp/scratch/RtmpmNfFiO’   ‘~/tmp/scratch/RtmpmZZy92’ ‘~/tmp/scratch/RtmpnhjZpv’   ‘~/tmp/scratch/RtmpniWvuX’ ‘~/tmp/scratch/RtmpnnmTrx’   ‘~/tmp/scratch/Rtmpo3pox7’ ‘~/tmp/scratch/Rtmpog9und’   ‘~/tmp/scratch/RtmpoyLqKg’ ‘~/tmp/scratch/Rtmpozwuxn’   ‘~/tmp/scratch/Rtmpq7rYGQ’ ‘~/tmp/scratch/RtmpqI3EIq’   ‘~/tmp/scratch/RtmpqkD6R8’ ‘~/tmp/scratch/RtmprR1bQL’   ‘~/tmp/scratch/RtmprpBf9K’ ‘~/tmp/scratch/RtmpsIOQgP’   ‘~/tmp/scratch/RtmpsXdL2H’ ‘~/tmp/scratch/RtmptH0zrc’   ‘~/tmp/scratch/RtmptRY2ah’ ‘~/tmp/scratch/RtmptiqFei’   ‘~/tmp/scratch/RtmpuXpZ3R’ ‘~/tmp/scratch/RtmpuluWx3’   ‘~/tmp/scratch/RtmpuphxHa’ ‘~/tmp/scratch/RtmpvZIBGI’   ‘~/tmp/scratch/Rtmpvd3JoS’ ‘~/tmp/scratch/Rtmpvzg2uV’   ‘~/tmp/scratch/RtmpwB3H8O’ ‘~/tmp/scratch/RtmpwKMmEJ’   ‘~/tmp/scratch/RtmpwreO3f’ ‘~/tmp/scratch/Rtmpwu9cUR’   ‘~/tmp/scratch/Rtmpx0OXhm’ ‘~/tmp/scratch/RtmpxseYXh’   ‘~/tmp/scratch/Rtmpyu536V’ ‘~/tmp/scratch/Rtmpyukx0Y’   ‘~/tmp/scratch/RtmpzT0W8z’ ‘~/tmp/scratch/Rtmpze8pqb’   ‘~/tmp/scratch/cc1nRBF8.s’ ‘~/tmp/scratch/xvfb-run.0wQsJu’   ‘~/tmp/scratch/xvfb-run.1EFuxd’ ‘~/tmp/scratch/xvfb-run.1mmqp1’   ‘~/tmp/scratch/xvfb-run.2B2H1g’ ‘~/tmp/scratch/xvfb-run.47kMSm’   ‘~/tmp/scratch/xvfb-run.4G8z9G’ ‘~/tmp/scratch/xvfb-run.4JOm9M’   ‘~/tmp/scratch/xvfb-run.5D7sTV’ ‘~/tmp/scratch/xvfb-run.6IIWqI’   ‘~/tmp/scratch/xvfb-run.7TEem2’ ‘~/tmp/scratch/xvfb-run.7eVTi5’   ‘~/tmp/scratch/xvfb-run.81nsCy’ ‘~/tmp/scratch/xvfb-run.835GLw’   ‘~/tmp/scratch/xvfb-run.8hGpzK’ ‘~/tmp/scratch/xvfb-run.CnhpdB’   ‘~/tmp/scratch/xvfb-run.DKHGID’ ‘~/tmp/scratch/xvfb-run.DoAKOP’   ‘~/tmp/scratch/xvfb-run.Dp8raf’ ‘~/tmp/scratch/xvfb-run.F96bZh’   ‘~/tmp/scratch/xvfb-run.GPr6PR’ ‘~/tmp/scratch/xvfb-run.HSlQiU’   ‘~/tmp/scratch/xvfb-run.IuFCfe’ ‘~/tmp/scratch/xvfb-run.JLUKWG’   ‘~/tmp/scratch/xvfb-run.JbXZpP’ ‘~/tmp/scratch/xvfb-run.KLgVvk’   ‘~/tmp/scratch/xvfb-run.LpcLDj’ ‘~/tmp/scratch/xvfb-run.Lz5W2S’   ‘~/tmp/scratch/xvfb-run.Mdzkxc’ ‘~/tmp/scratch/xvfb-run.N8DNKD’   ‘~/tmp/scratch/xvfb-run.NeOFJm’ ‘~/tmp/scratch/xvfb-run.ObXwAJ’   ‘~/tmp/scratch/xvfb-run.Oiz5Hk’ ‘~/tmp/scratch/xvfb-run.OtCL2h’   ‘~/tmp/scratch/xvfb-run.OuMBbK’ ‘~/tmp/scratch/xvfb-run.PteZiX’   ‘~/tmp/scratch/xvfb-run.Px9SpJ’ ‘~/tmp/scratch/xvfb-run.R6JyB0’   ‘~/tmp/scratch/xvfb-run.REOz0a’ ‘~/tmp/scratch/xvfb-run.UBUhrz’   ‘~/tmp/scratch/xvfb-run.UGWn3h’ ‘~/tmp/scratch/xvfb-run.UdEXBu’   ‘~/tmp/scratch/xvfb-run.WbqtFN’ ‘~/tmp/scratch/xvfb-run.WeXN9Z’   ‘~/tmp/scratch/xvfb-run.X5og6P’ ‘~/tmp/scratch/xvfb-run.X9KGj9’   ‘~/tmp/scratch/xvfb-run.aQhwQW’ ‘~/tmp/scratch/xvfb-run.ayw364’   ‘~/tmp/scratch/xvfb-run.dCmxgi’ ‘~/tmp/scratch/xvfb-run.dLv0Mz’   ‘~/tmp/scratch/xvfb-run.dkafbc’ ‘~/tmp/scratch/xvfb-run.e4GsLV’   ‘~/tmp/scratch/xvfb-run.eX5DEe’ ‘~/tmp/scratch/xvfb-run.gIytjL’   ‘~/tmp/scratch/xvfb-run.gmizdj’ ‘~/tmp/scratch/xvfb-run.hNU5dD’   ‘~/tmp/scratch/xvfb-run.iBZqII’ ‘~/tmp/scratch/xvfb-run.ifY17o’   ‘~/tmp/scratch/xvfb-run.jwxWs6’ ‘~/tmp/scratch/xvfb-run.lhtuTP’   ‘~/tmp/scratch/xvfb-run.mTPwQi’ ‘~/tmp/scratch/xvfb-run.n3oxAB’   ‘~/tmp/scratch/xvfb-run.n8SRie’ ‘~/tmp/scratch/xvfb-run.nfz4rt’   ‘~/tmp/scratch/xvfb-run.oWhiPq’ ‘~/tmp/scratch/xvfb-run.q3MuP4’   ‘~/tmp/scratch/xvfb-run.rOJA3g’ ‘~/tmp/scratch/xvfb-run.sieGvo’   ‘~/tmp/scratch/xvfb-run.ssED00’ ‘~/tmp/scratch/xvfb-run.tqXmyA’   ‘~/tmp/scratch/xvfb-run.uTQAms’ ‘~/tmp/scratch/xvfb-run.v17bQg’   ‘~/tmp/scratch/xvfb-run.w5PV5m’ ‘~/tmp/scratch/xvfb-run.wZq274’   ‘~/tmp/scratch/xvfb-run.wlai0f’ ‘~/tmp/scratch/xvfb-run.xjX0Xk’   ‘~/tmp/scratch/xvfb-run.xvANQR’ ‘~/tmp/scratch/xvfb-run.yXkdDu’   ‘~/tmp/scratch/xvfb-run.zvHgpZ’
• DONE

Status: 2 NOTEs