• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 16:01:46 UTC
• checking for file ‘likelihood/DESCRIPTION’ ... OK
• this is package ‘likelihood’ version ‘1.9’
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘likelihood’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s/9s] OK
• checking Rd files ... [0s/1s] NOTE checkRd: (-1) likelihood_calculation.Rd:24: Lost braces     24 | For eqn{i = 1\dots N} independent observations in a vector \var{X}, with individual observations \eqn{x_i}{xi}, and a set of parameter values \eqn{\theta}:        | ^ checkRd: (-1) simulated_annealing_algorithm.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) simulated_annealing_algorithm.Rd:27: Lost braces in \itemize; meant \describe ?
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0WCgGY’ ‘~/tmp/scratch/Rtmp0fIUYB’   ‘~/tmp/scratch/Rtmp0fIvvu’ ‘~/tmp/scratch/Rtmp1D5BUC’   ‘~/tmp/scratch/Rtmp1t4beN’ ‘~/tmp/scratch/Rtmp28wYTi’   ‘~/tmp/scratch/Rtmp2NR5RH’ ‘~/tmp/scratch/Rtmp2RcUJo’   ‘~/tmp/scratch/Rtmp2io7Uh’ ‘~/tmp/scratch/Rtmp38MfAr’   ‘~/tmp/scratch/Rtmp3GAArq’ ‘~/tmp/scratch/Rtmp3POea4’   ‘~/tmp/scratch/Rtmp5GOKzN’ ‘~/tmp/scratch/Rtmp61p0kV’   ‘~/tmp/scratch/Rtmp6NXwMt’ ‘~/tmp/scratch/Rtmp6vZmrH’   ‘~/tmp/scratch/Rtmp7q8i6a’ ‘~/tmp/scratch/Rtmp8CYhSg’   ‘~/tmp/scratch/Rtmp8U5Lyo’ ‘~/tmp/scratch/RtmpAQ3YLw’   ‘~/tmp/scratch/RtmpAfK9eb’ ‘~/tmp/scratch/RtmpCWcHLu’   ‘~/tmp/scratch/RtmpCjJUNy’ ‘~/tmp/scratch/RtmpDE1qJj’   ‘~/tmp/scratch/RtmpE2giKi’ ‘~/tmp/scratch/RtmpEiQOA4’   ‘~/tmp/scratch/RtmpFSxpDn’ ‘~/tmp/scratch/RtmpFlZU2d’   ‘~/tmp/scratch/RtmpG8yDsB’ ‘~/tmp/scratch/RtmpGF1Zzx’   ‘~/tmp/scratch/RtmpIEb3EH’ ‘~/tmp/scratch/RtmpJ1M2lT’   ‘~/tmp/scratch/RtmpJD4s45’ ‘~/tmp/scratch/RtmpJDO9Qc’   ‘~/tmp/scratch/RtmpJd6fMf’ ‘~/tmp/scratch/RtmpKHc612’   ‘~/tmp/scratch/RtmpKq4O2f’ ‘~/tmp/scratch/RtmpMIrWiT’   ‘~/tmp/scratch/RtmpMad6vq’ ‘~/tmp/scratch/RtmpMjAly0’   ‘~/tmp/scratch/RtmpMouMMQ’ ‘~/tmp/scratch/RtmpN3SH83’   ‘~/tmp/scratch/RtmpN8YyfK’ ‘~/tmp/scratch/RtmpNBq7f7’   ‘~/tmp/scratch/RtmpNYzrQ7’ ‘~/tmp/scratch/RtmpO0cKcW’   ‘~/tmp/scratch/RtmpOStlCA’ ‘~/tmp/scratch/RtmpPQjGQt’   ‘~/tmp/scratch/RtmpRKAqG2’ ‘~/tmp/scratch/RtmpRkjnLc’   ‘~/tmp/scratch/RtmpScRsK2’ ‘~/tmp/scratch/RtmpUBHQR4’   ‘~/tmp/scratch/RtmpUrLtZd’ ‘~/tmp/scratch/RtmpUzVM7n’   ‘~/tmp/scratch/RtmpVECtpN’ ‘~/tmp/scratch/RtmpVKd8fa’   ‘~/tmp/scratch/RtmpVOSGA2’ ‘~/tmp/scratch/RtmpVWIOI9’   ‘~/tmp/scratch/RtmpVpttFX’ ‘~/tmp/scratch/RtmpWnjMfN’   ‘~/tmp/scratch/RtmpXaFBsS’ ‘~/tmp/scratch/RtmpYAmVmc’   ‘~/tmp/scratch/RtmpYSjfVG’ ‘~/tmp/scratch/RtmpYxEpKW’   ‘~/tmp/scratch/RtmpaoJrP2’ ‘~/tmp/scratch/RtmpbcCokA’   ‘~/tmp/scratch/RtmpbdovIw’ ‘~/tmp/scratch/RtmpbmtKmJ’   ‘~/tmp/scratch/Rtmpc28Bqh’ ‘~/tmp/scratch/RtmpcdamGy’   ‘~/tmp/scratch/Rtmpd2RxGf’ ‘~/tmp/scratch/RtmpdgN5Fc’   ‘~/tmp/scratch/Rtmpdq39Yk’ ‘~/tmp/scratch/RtmpercGsX’   ‘~/tmp/scratch/Rtmphl38p2’ ‘~/tmp/scratch/RtmpixEPyB’   ‘~/tmp/scratch/RtmpjBbWp5’ ‘~/tmp/scratch/RtmpjbZr4f’   ‘~/tmp/scratch/RtmpjpNRux’ ‘~/tmp/scratch/RtmpjqePry’   ‘~/tmp/scratch/Rtmpjz9AUJ’ ‘~/tmp/scratch/Rtmpk8iIri’   ‘~/tmp/scratch/RtmpksW2t4’ ‘~/tmp/scratch/Rtmpkv9hS8’   ‘~/tmp/scratch/RtmpmA51xK’ ‘~/tmp/scratch/RtmpnzGMx1’   ‘~/tmp/scratch/RtmpoPhUbi’ ‘~/tmp/scratch/RtmppgLgcq’   ‘~/tmp/scratch/RtmppufU9a’ ‘~/tmp/scratch/RtmppvYg9f’   ‘~/tmp/scratch/RtmpqJLmtF’ ‘~/tmp/scratch/RtmpqZ52FK’   ‘~/tmp/scratch/RtmpqgFPVC’ ‘~/tmp/scratch/RtmpqiLWj1’   ‘~/tmp/scratch/Rtmpr6DE5N’ ‘~/tmp/scratch/RtmprQ0Ur6’   ‘~/tmp/scratch/RtmpuvNmKn’ ‘~/tmp/scratch/Rtmpv3j92C’   ‘~/tmp/scratch/RtmpvLVCwq’ ‘~/tmp/scratch/RtmpvZ9EMU’   ‘~/tmp/scratch/Rtmpw8JDi8’ ‘~/tmp/scratch/RtmpwZpmVm’   ‘~/tmp/scratch/Rtmpy3KNbM’ ‘~/tmp/scratch/RtmpyI3BEJ’   ‘~/tmp/scratch/Rtmpz9UzOd’ ‘~/tmp/scratch/RtmpzzyhSP’   ‘~/tmp/scratch/xvfb-run.3uq91k’ ‘~/tmp/scratch/xvfb-run.6UAe2N’   ‘~/tmp/scratch/xvfb-run.6zI93u’ ‘~/tmp/scratch/xvfb-run.7G6y0p’   ‘~/tmp/scratch/xvfb-run.7ZWaAZ’ ‘~/tmp/scratch/xvfb-run.87fmAl’   ‘~/tmp/scratch/xvfb-run.A2hg3j’ ‘~/tmp/scratch/xvfb-run.A5Kb4s’   ‘~/tmp/scratch/xvfb-run.AWmRIw’ ‘~/tmp/scratch/xvfb-run.EEebY9’   ‘~/tmp/scratch/xvfb-run.IZOi7W’ ‘~/tmp/scratch/xvfb-run.JlaMhg’   ‘~/tmp/scratch/xvfb-run.L6WlSM’ ‘~/tmp/scratch/xvfb-run.MgrC6K’   ‘~/tmp/scratch/xvfb-run.NnA9aT’ ‘~/tmp/scratch/xvfb-run.On0ymI’   ‘~/tmp/scratch/xvfb-run.VRQrfG’ ‘~/tmp/scratch/xvfb-run.W3vXcy’   ‘~/tmp/scratch/xvfb-run.WzQK69’ ‘~/tmp/scratch/xvfb-run.Y7H8hS’   ‘~/tmp/scratch/xvfb-run.amZCdL’ ‘~/tmp/scratch/xvfb-run.dKKbO3’   ‘~/tmp/scratch/xvfb-run.giCE2x’ ‘~/tmp/scratch/xvfb-run.hHlHDB’   ‘~/tmp/scratch/xvfb-run.hPKp2g’ ‘~/tmp/scratch/xvfb-run.j2UZlS’   ‘~/tmp/scratch/xvfb-run.nhnzgZ’ ‘~/tmp/scratch/xvfb-run.oDWlqv’   ‘~/tmp/scratch/xvfb-run.pw3iu0’ ‘~/tmp/scratch/xvfb-run.uupO9D’   ‘~/tmp/scratch/xvfb-run.vHgTBR’
• DONE

Status: 2 NOTEs