• using R Under development (unstable) (2025-12-11 r89152)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-9) 15.2.0     GNU Fortran (Debian 15.2.0-9) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘ldmppr/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ldmppr’ version ‘1.0.4’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘ldmppr’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’
• checking C++ specification ... OK
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking whether startup messages can be suppressed ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/15s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [11s/14s] ERROR Running examples in ‘ldmppr-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: predict_marks > ### Title: Predict values from the mark distribution > ### Aliases: predict_marks > > ### ** Examples > > # Simulate a realization > generating_parameters <- c(2, 8, .02, 2.5, 3, 1, 2.5, .2) > M_n <- matrix(c(10, 14), ncol = 1) > generated_locs <- simulate_sc( + t_min = 0, + t_max = 1, + sc_params = generating_parameters, + anchor_point = M_n, + xy_bounds = c(0, 25, 0, 25) + ) > > # Load the raster files > raster_paths <- list.files(system.file("extdata", package = "ldmppr"), + pattern = "\\.tif$", full.names = TRUE + ) > rasters <- lapply(raster_paths, terra::rast) > > # Scale the rasters > scaled_raster_list <- scale_rasters(rasters) > > # Load the example mark model > file_path <- system.file("extdata", "example_mark_model.rds", package = "ldmppr") > example_mark_model <- readRDS(file_path) > > # Unbundle the model > mark_model <- bundle::unbundle(example_mark_model) Error in xgboost::xgb.load.raw(object, as_booster = TRUE) :   unused argument (as_booster = TRUE) Calls: <Anonymous> ... <Anonymous> -> unbundle -> unbundle.bundle -> <Anonymous> Execution halted Examples with CPU (user + system) or elapsed time > 5s                 user system elapsed extract_covars 4.046 0.122 5.593
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [104s/124s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR