- using R Under development (unstable) (2023-06-05 r84504)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-12 (Debian 12.2.0-14) 12.2.0
GNU Fortran (Debian 12.2.0-14) 12.2.0
- running under: Debian GNU/Linux 12 (bookworm)
- using session charset: UTF-8
- using option ‘--no-tests’
- checking for file ‘joineRML/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘joineRML’ version ‘0.4.6’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘joineRML’ can be installed ... OK
- used C compiler: ‘gcc-12 (Debian 12.2.0-14) 12.2.0’
- used C++ compiler: ‘g++-12 (Debian 12.2.0-14) 12.2.0’
- checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [4s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/5s] OK
- checking whether the package can be unloaded cleanly ... [3s/5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/5s] OK
- checking whether the namespace can be unloaded cleanly ... [4s/6s] OK
- checking loading without being on the library search path ... [4s/7s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [28s/45s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [1s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [98s/105s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
vcov.mjoint 21.699 0.202 22.810
plot.mjoint 21.173 0.213 22.841
mjoint 19.640 0.257 20.750
fixef.mjoint 14.974 0.262 16.062
confint.mjoint 14.819 0.344 15.727
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... SKIPPED
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking re-building of vignette outputs ... [15m/16m] OK
- checking PDF version of manual ... [6s/14s] OK
- checking HTML version of manual ... [3s/6s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE