• using R Under development (unstable) (2026-01-25 r89330)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-12) 15.2.0     GNU Fortran (Debian 15.2.0-12) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘growthTrendR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘growthTrendR’ version ‘0.2.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘growthTrendR’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [8s/9s] OK
• checking whether the package can be loaded with stated dependencies ... [9s/10s] OK
• checking whether the package can be unloaded cleanly ... [7s/8s] OK
• checking whether the namespace can be loaded with stated dependencies ... [8s/11s] OK
• checking whether the namespace can be unloaded cleanly ... [8s/11s] OK
• checking loading without being on the library search path ... [8s/9s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [39s/49s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [16s/19s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [13s/18s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘demo_vgn3_models.Rmd’ using rmarkdown Quitting from demo_vgn3_models.Rmd:117-121 [mod_report] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `file()`: ! cannot open the connection --- Backtrace:     ▆  1. └─growthTrendR::generate_report(robj = m.sp, output_file = outfile_mod)  2. └─rmarkdown::render(...)  3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)  4. └─knitr:::process_file(text, output)  5. └─xfun:::handle_error(...)  6. └─knitr (local) handler(loc)  7. └─xfun::write_utf8(res, output %n% stdout())  8. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)  9. └─base::file(con, "w") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'demo_vgn3_models.Rmd' failed with diagnostics: cannot open the connection --- failed re-building ‘demo_vgn3_models.Rmd’ SUMMARY: processing the following file failed:   ‘demo_vgn3_models.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR