• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 15:12:25 UTC
• checking for file ‘ggvegan/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ggvegan’ version ‘0.2.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘ggvegan’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/4s] OK
• checking whether the package can be unloaded cleanly ... [2s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/17s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [17s/25s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [15s/17s] OK   Running ‘testthat.R’ [15s/17s]
• checking PDF version of manual ... [5s/6s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0GLNZn’ ‘~/tmp/scratch/Rtmp1RFnbd’   ‘~/tmp/scratch/Rtmp1u0ydW’ ‘~/tmp/scratch/Rtmp25BJBZ’   ‘~/tmp/scratch/Rtmp2HENsq’ ‘~/tmp/scratch/Rtmp2gLBbp’   ‘~/tmp/scratch/Rtmp39khRv’ ‘~/tmp/scratch/Rtmp3DE55y’   ‘~/tmp/scratch/Rtmp3OTegr’ ‘~/tmp/scratch/Rtmp3TMiwU’   ‘~/tmp/scratch/Rtmp3gnmWQ’ ‘~/tmp/scratch/Rtmp3jCsTF’   ‘~/tmp/scratch/Rtmp4J1NKy’ ‘~/tmp/scratch/Rtmp4Rr8Ck’   ‘~/tmp/scratch/Rtmp4o9mm9’ ‘~/tmp/scratch/Rtmp4pfUUr’   ‘~/tmp/scratch/Rtmp4qLluY’ ‘~/tmp/scratch/Rtmp51cLPm’   ‘~/tmp/scratch/Rtmp53gkrH’ ‘~/tmp/scratch/Rtmp5sxKBz’   ‘~/tmp/scratch/Rtmp63FA9t’ ‘~/tmp/scratch/Rtmp6azS1d’   ‘~/tmp/scratch/Rtmp6q2llS’ ‘~/tmp/scratch/Rtmp7ejZSN’   ‘~/tmp/scratch/Rtmp8DS0F5’ ‘~/tmp/scratch/Rtmp9Oq57Z’   ‘~/tmp/scratch/Rtmp9oWKMP’ ‘~/tmp/scratch/RtmpAGY64g’   ‘~/tmp/scratch/RtmpAPuQl1’ ‘~/tmp/scratch/RtmpC1ruzi’   ‘~/tmp/scratch/RtmpC94tTH’ ‘~/tmp/scratch/RtmpCYJD8z’   ‘~/tmp/scratch/RtmpChaOX2’ ‘~/tmp/scratch/RtmpCuhAx8’   ‘~/tmp/scratch/RtmpCwp3m0’ ‘~/tmp/scratch/RtmpCzt6k0’   ‘~/tmp/scratch/RtmpD4MfSK’ ‘~/tmp/scratch/RtmpDpnbij’   ‘~/tmp/scratch/RtmpETMhJO’ ‘~/tmp/scratch/RtmpFgsW7F’   ‘~/tmp/scratch/RtmpG7KbJQ’ ‘~/tmp/scratch/RtmpGwAvNF’   ‘~/tmp/scratch/RtmpH4NehU’ ‘~/tmp/scratch/RtmpHl3c54’   ‘~/tmp/scratch/RtmpIfeizM’ ‘~/tmp/scratch/RtmpJebrQ6’   ‘~/tmp/scratch/RtmpMHsEYn’ ‘~/tmp/scratch/RtmpMpWs53’   ‘~/tmp/scratch/RtmpMyJf5F’ ‘~/tmp/scratch/RtmpN3J11R’   ‘~/tmp/scratch/RtmpNF35f1’ ‘~/tmp/scratch/RtmpNLOywK’   ‘~/tmp/scratch/RtmpNyQSJj’ ‘~/tmp/scratch/RtmpOCzKBs’   ‘~/tmp/scratch/RtmpOj14Ca’ ‘~/tmp/scratch/RtmpPXUVM2’   ‘~/tmp/scratch/RtmpQCPGzy’ ‘~/tmp/scratch/RtmpQTrlbM’   ‘~/tmp/scratch/RtmpQXCeLJ’ ‘~/tmp/scratch/RtmpQtJeNg’   ‘~/tmp/scratch/RtmpRlkw5c’ ‘~/tmp/scratch/RtmpSOiClQ’   ‘~/tmp/scratch/RtmpTY2YfP’ ‘~/tmp/scratch/RtmpTZeF73’   ‘~/tmp/scratch/RtmpTgimk5’ ‘~/tmp/scratch/RtmpTpzY2H’   ‘~/tmp/scratch/RtmpU0c6KJ’ ‘~/tmp/scratch/RtmpVNVoCC’   ‘~/tmp/scratch/RtmpVjZpip’ ‘~/tmp/scratch/RtmpVnm9Yo’   ‘~/tmp/scratch/RtmpVxvo2z’ ‘~/tmp/scratch/RtmpW2feeL’   ‘~/tmp/scratch/RtmpW7KOC8’ ‘~/tmp/scratch/RtmpWNXQyn’   ‘~/tmp/scratch/RtmpWz0ly2’ ‘~/tmp/scratch/RtmpXjfDbb’   ‘~/tmp/scratch/RtmpYGOr0u’ ‘~/tmp/scratch/RtmpYb7lRG’   ‘~/tmp/scratch/RtmpZ6n3RQ’ ‘~/tmp/scratch/RtmpZHtTsO’   ‘~/tmp/scratch/RtmpZLBSyi’ ‘~/tmp/scratch/RtmpZPdSi0’   ‘~/tmp/scratch/RtmpaOAksT’ ‘~/tmp/scratch/Rtmpayfq3O’   ‘~/tmp/scratch/RtmpbKSMeK’ ‘~/tmp/scratch/RtmpbOlWgN’   ‘~/tmp/scratch/RtmpbQEysI’ ‘~/tmp/scratch/RtmpbaNxL7’   ‘~/tmp/scratch/RtmpbyMZSN’ ‘~/tmp/scratch/RtmpcjbyTP’   ‘~/tmp/scratch/Rtmpd2OG3u’ ‘~/tmp/scratch/Rtmpdw2SA7’   ‘~/tmp/scratch/Rtmpe1a7a0’ ‘~/tmp/scratch/RtmpehoGM9’   ‘~/tmp/scratch/RtmpfdDmtd’ ‘~/tmp/scratch/RtmpgBiaDi’   ‘~/tmp/scratch/RtmphDVAUq’ ‘~/tmp/scratch/RtmphThYqO’   ‘~/tmp/scratch/RtmphjFzAt’ ‘~/tmp/scratch/Rtmpi1ntpZ’   ‘~/tmp/scratch/RtmpiBPlSK’ ‘~/tmp/scratch/RtmpiPqDZ6’   ‘~/tmp/scratch/RtmpitnRKJ’ ‘~/tmp/scratch/RtmpjSEVOJ’   ‘~/tmp/scratch/Rtmpjg5SfA’ ‘~/tmp/scratch/RtmpjvRmnr’   ‘~/tmp/scratch/RtmpkWdK2U’ ‘~/tmp/scratch/RtmpkybHyA’   ‘~/tmp/scratch/RtmplJyBkv’ ‘~/tmp/scratch/RtmpmGprat’   ‘~/tmp/scratch/RtmpmfmNM4’ ‘~/tmp/scratch/Rtmpn4pi15’   ‘~/tmp/scratch/RtmpnmnXbY’ ‘~/tmp/scratch/Rtmpo7Pc8m’   ‘~/tmp/scratch/RtmpoG7Olh’ ‘~/tmp/scratch/RtmppwN9TN’   ‘~/tmp/scratch/RtmpqcpCTZ’ ‘~/tmp/scratch/RtmpqhN5p3’   ‘~/tmp/scratch/RtmpqrP66X’ ‘~/tmp/scratch/Rtmps62JVW’   ‘~/tmp/scratch/Rtmps68VO5’ ‘~/tmp/scratch/Rtmps6HTLm’   ‘~/tmp/scratch/RtmpsVC9KI’ ‘~/tmp/scratch/RtmpsVbwTt’   ‘~/tmp/scratch/RtmptkoH69’ ‘~/tmp/scratch/RtmptokFuK’   ‘~/tmp/scratch/Rtmptw4GGh’ ‘~/tmp/scratch/RtmptxU2e4’   ‘~/tmp/scratch/RtmpuCMfOb’ ‘~/tmp/scratch/RtmpuX9LM6’   ‘~/tmp/scratch/Rtmpv1o9N6’ ‘~/tmp/scratch/RtmpvrSazs’   ‘~/tmp/scratch/RtmpwPhUkr’ ‘~/tmp/scratch/RtmpxE0vlM’   ‘~/tmp/scratch/Rtmpy90bPE’ ‘~/tmp/scratch/Rtmpz5tbpE’   ‘~/tmp/scratch/RtmpzEqCSt’   ‘~/tmp/scratch/quarto-session1b82a2127050f227’   ‘~/tmp/scratch/xvfb-run.0Ari3x’ ‘~/tmp/scratch/xvfb-run.0euZxD’   ‘~/tmp/scratch/xvfb-run.0gSeoi’ ‘~/tmp/scratch/xvfb-run.0yoxqT’   ‘~/tmp/scratch/xvfb-run.1iwpEL’ ‘~/tmp/scratch/xvfb-run.2AXN5S’   ‘~/tmp/scratch/xvfb-run.2a7Kgb’ ‘~/tmp/scratch/xvfb-run.6qUoi3’   ‘~/tmp/scratch/xvfb-run.7Bb73S’ ‘~/tmp/scratch/xvfb-run.7FQYwu’   ‘~/tmp/scratch/xvfb-run.9rT4b2’ ‘~/tmp/scratch/xvfb-run.ANMsBP’   ‘~/tmp/scratch/xvfb-run.ATFIBE’ ‘~/tmp/scratch/xvfb-run.D6jqwK’   ‘~/tmp/scratch/xvfb-run.DmsHOX’ ‘~/tmp/scratch/xvfb-run.FjJavu’   ‘~/tmp/scratch/xvfb-run.FnFq2v’ ‘~/tmp/scratch/xvfb-run.H3gE5r’   ‘~/tmp/scratch/xvfb-run.JGnurm’ ‘~/tmp/scratch/xvfb-run.KMAd1o’   ‘~/tmp/scratch/xvfb-run.L2DAIs’ ‘~/tmp/scratch/xvfb-run.LrDoIT’   ‘~/tmp/scratch/xvfb-run.M0aGzg’ ‘~/tmp/scratch/xvfb-run.OlVTwt’   ‘~/tmp/scratch/xvfb-run.PAJ7c0’ ‘~/tmp/scratch/xvfb-run.PCwkDn’   ‘~/tmp/scratch/xvfb-run.PoFSde’ ‘~/tmp/scratch/xvfb-run.QC5Wgl’   ‘~/tmp/scratch/xvfb-run.RCGrOc’ ‘~/tmp/scratch/xvfb-run.TB1cim’   ‘~/tmp/scratch/xvfb-run.Ua8U6l’ ‘~/tmp/scratch/xvfb-run.Ur6qU7’   ‘~/tmp/scratch/xvfb-run.WYdxXh’ ‘~/tmp/scratch/xvfb-run.WsgyrT’   ‘~/tmp/scratch/xvfb-run.XGBnBT’ ‘~/tmp/scratch/xvfb-run.XY34jS’   ‘~/tmp/scratch/xvfb-run.XZSvWv’ ‘~/tmp/scratch/xvfb-run.Xy0pBd’   ‘~/tmp/scratch/xvfb-run.Ze1fWw’ ‘~/tmp/scratch/xvfb-run.b2dWy9’   ‘~/tmp/scratch/xvfb-run.b4KwMb’ ‘~/tmp/scratch/xvfb-run.bmH3M9’   ‘~/tmp/scratch/xvfb-run.c2NpG4’ ‘~/tmp/scratch/xvfb-run.k7xG8f’   ‘~/tmp/scratch/xvfb-run.mFTOKJ’ ‘~/tmp/scratch/xvfb-run.nYX6Dd’   ‘~/tmp/scratch/xvfb-run.naocdV’ ‘~/tmp/scratch/xvfb-run.nrAQV4’   ‘~/tmp/scratch/xvfb-run.rU9nkM’ ‘~/tmp/scratch/xvfb-run.sUbQ5O’   ‘~/tmp/scratch/xvfb-run.vBvpU4’ ‘~/tmp/scratch/xvfb-run.vs9alt’   ‘~/tmp/scratch/xvfb-run.wJJDoH’ ‘~/tmp/scratch/xvfb-run.wgBOk0’   ‘~/tmp/scratch/xvfb-run.whEuSc’ ‘~/tmp/scratch/xvfb-run.xmEMvA’   ‘~/tmp/scratch/xvfb-run.zNef0M’
• DONE

Status: 1 NOTE