• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 15:09:51 UTC
• checking for file ‘ggpedigree/DESCRIPTION’ ... OK
• this is package ‘ggpedigree’ version ‘1.2.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘ggpedigree’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [21s/24s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/8s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [109s/119s] OK   Running ‘testthat.R’ [109s/118s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [29s/34s] OK
• checking PDF version of manual ... [6s/7s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0GLNZn’ ‘~/tmp/scratch/Rtmp0TxnWc’   ‘~/tmp/scratch/Rtmp0ftajS’ ‘~/tmp/scratch/Rtmp1CxQMh’   ‘~/tmp/scratch/Rtmp1ReM5Y’ ‘~/tmp/scratch/Rtmp1mPPlC’   ‘~/tmp/scratch/Rtmp1tD3mG’ ‘~/tmp/scratch/Rtmp2gLBbp’   ‘~/tmp/scratch/Rtmp3GSIPF’ ‘~/tmp/scratch/Rtmp3VJtma’   ‘~/tmp/scratch/Rtmp3nIQO8’ ‘~/tmp/scratch/Rtmp4J1NKy’   ‘~/tmp/scratch/Rtmp4iGlEo’ ‘~/tmp/scratch/Rtmp4o9mm9’   ‘~/tmp/scratch/Rtmp4qLluY’ ‘~/tmp/scratch/Rtmp5PLgOj’   ‘~/tmp/scratch/Rtmp5xZ43D’ ‘~/tmp/scratch/Rtmp6Pkqjm’   ‘~/tmp/scratch/Rtmp6dolNm’ ‘~/tmp/scratch/Rtmp7YsSXD’   ‘~/tmp/scratch/Rtmp7apLtD’ ‘~/tmp/scratch/Rtmp7e05Xd’   ‘~/tmp/scratch/Rtmp7ytfV4’ ‘~/tmp/scratch/Rtmp8DS0F5’   ‘~/tmp/scratch/Rtmp8mFZdb’ ‘~/tmp/scratch/Rtmp8u8iFI’   ‘~/tmp/scratch/Rtmp98S0oD’ ‘~/tmp/scratch/Rtmp9Oq57Z’   ‘~/tmp/scratch/Rtmp9SL93R’ ‘~/tmp/scratch/Rtmp9TvTqY’   ‘~/tmp/scratch/Rtmp9v184q’ ‘~/tmp/scratch/RtmpAEupwF’   ‘~/tmp/scratch/RtmpAuGmQi’ ‘~/tmp/scratch/RtmpAvSPUy’   ‘~/tmp/scratch/RtmpBHl0vE’ ‘~/tmp/scratch/RtmpBldyup’   ‘~/tmp/scratch/RtmpBnjJZo’ ‘~/tmp/scratch/RtmpC94tTH’   ‘~/tmp/scratch/RtmpCmrssi’ ‘~/tmp/scratch/RtmpD2DQIu’   ‘~/tmp/scratch/RtmpD4MfSK’ ‘~/tmp/scratch/RtmpDO5FDa’   ‘~/tmp/scratch/RtmpE9v6sB’ ‘~/tmp/scratch/RtmpEE0oAX’   ‘~/tmp/scratch/RtmpFcC59z’ ‘~/tmp/scratch/RtmpFgsW7F’   ‘~/tmp/scratch/RtmpHEaoPc’ ‘~/tmp/scratch/RtmpHivO7T’   ‘~/tmp/scratch/RtmpHl3c54’ ‘~/tmp/scratch/RtmpJYNOAl’   ‘~/tmp/scratch/RtmpJebrQ6’ ‘~/tmp/scratch/RtmpJi7UaR’   ‘~/tmp/scratch/RtmpKY1ENN’ ‘~/tmp/scratch/RtmpKoFEJx’   ‘~/tmp/scratch/RtmpLWswRd’ ‘~/tmp/scratch/RtmpMHsEYn’   ‘~/tmp/scratch/RtmpMZmPGN’ ‘~/tmp/scratch/RtmpMiCieb’   ‘~/tmp/scratch/RtmpMpWs53’ ‘~/tmp/scratch/RtmpN6C7nk’   ‘~/tmp/scratch/RtmpNLOywK’ ‘~/tmp/scratch/RtmpNVnOTF’   ‘~/tmp/scratch/RtmpOmeBRx’ ‘~/tmp/scratch/RtmpPUBqkv’   ‘~/tmp/scratch/RtmpPnIf0z’ ‘~/tmp/scratch/RtmpQAcsVx’   ‘~/tmp/scratch/RtmpQTrlbM’ ‘~/tmp/scratch/RtmpQXCeLJ’   ‘~/tmp/scratch/RtmpRIpfwZ’ ‘~/tmp/scratch/RtmpRfLXrc’   ‘~/tmp/scratch/RtmpRfnYuW’ ‘~/tmp/scratch/RtmpRlkw5c’   ‘~/tmp/scratch/RtmpSOmBAJ’ ‘~/tmp/scratch/RtmpTgimk5’   ‘~/tmp/scratch/RtmpTxm4gY’ ‘~/tmp/scratch/RtmpU45HIo’   ‘~/tmp/scratch/RtmpUQS6IZ’ ‘~/tmp/scratch/RtmpUrtFk5’   ‘~/tmp/scratch/RtmpUwIprw’ ‘~/tmp/scratch/RtmpV5Wgzi’   ‘~/tmp/scratch/RtmpV72JqP’ ‘~/tmp/scratch/RtmpVNVoCC’   ‘~/tmp/scratch/RtmpVf54oC’ ‘~/tmp/scratch/RtmpVs1vbI’   ‘~/tmp/scratch/RtmpW7KOC8’ ‘~/tmp/scratch/RtmpWXv0rg’   ‘~/tmp/scratch/RtmpWz0ly2’ ‘~/tmp/scratch/RtmpXMn74e’   ‘~/tmp/scratch/RtmpXrdjPX’ ‘~/tmp/scratch/RtmpXxtivJ’   ‘~/tmp/scratch/RtmpYb7lRG’ ‘~/tmp/scratch/RtmpYdAiaD’   ‘~/tmp/scratch/RtmpZHtTsO’ ‘~/tmp/scratch/RtmpaJ1L4q’   ‘~/tmp/scratch/RtmpaOAksT’ ‘~/tmp/scratch/RtmparbXQZ’   ‘~/tmp/scratch/Rtmpb17dtl’ ‘~/tmp/scratch/RtmpbB0K4N’   ‘~/tmp/scratch/RtmpbFDCuG’ ‘~/tmp/scratch/RtmpbKSMeK’   ‘~/tmp/scratch/RtmpbS06G1’ ‘~/tmp/scratch/RtmpbyMZSN’   ‘~/tmp/scratch/RtmpcWUJNc’ ‘~/tmp/scratch/RtmpcjbyTP’   ‘~/tmp/scratch/RtmpcmgdwG’ ‘~/tmp/scratch/Rtmpe1a7a0’   ‘~/tmp/scratch/RtmpewY2AZ’ ‘~/tmp/scratch/Rtmpf50vP0’   ‘~/tmp/scratch/RtmpfIM59n’ ‘~/tmp/scratch/RtmpfOLm31’   ‘~/tmp/scratch/RtmpfWwbmC’ ‘~/tmp/scratch/Rtmpfae6Nv’   ‘~/tmp/scratch/RtmpftF5DL’ ‘~/tmp/scratch/RtmpgjCAsv’   ‘~/tmp/scratch/Rtmph1qMio’ ‘~/tmp/scratch/RtmphD6zQc’   ‘~/tmp/scratch/RtmphJ134E’ ‘~/tmp/scratch/RtmphjVDRW’   ‘~/tmp/scratch/Rtmpi1ntpZ’ ‘~/tmp/scratch/Rtmpi8IBGa’   ‘~/tmp/scratch/RtmpiBPlSK’ ‘~/tmp/scratch/RtmpiNJpOA’   ‘~/tmp/scratch/RtmpjvRmnr’ ‘~/tmp/scratch/RtmpkWdK2U’   ‘~/tmp/scratch/RtmpkqpOKf’ ‘~/tmp/scratch/Rtmpkytujg’   ‘~/tmp/scratch/Rtmpl6zIQN’ ‘~/tmp/scratch/RtmplJyBkv’   ‘~/tmp/scratch/RtmplqMqIC’ ‘~/tmp/scratch/Rtmpm2LciS’   ‘~/tmp/scratch/Rtmpm3uWpr’ ‘~/tmp/scratch/RtmpmfmNM4’   ‘~/tmp/scratch/Rtmpmonb8U’ ‘~/tmp/scratch/RtmpnJzGAe’   ‘~/tmp/scratch/RtmpndrRU3’ ‘~/tmp/scratch/RtmpoHRR6u’   ‘~/tmp/scratch/RtmpoMfHd9’ ‘~/tmp/scratch/RtmppDXPhm’   ‘~/tmp/scratch/Rtmppqe8aC’ ‘~/tmp/scratch/RtmppwN9TN’   ‘~/tmp/scratch/Rtmpq65rXN’ ‘~/tmp/scratch/RtmpqERtjP’   ‘~/tmp/scratch/RtmpqZfJWN’ ‘~/tmp/scratch/Rtmprob3ic’   ‘~/tmp/scratch/RtmprrPbrx’ ‘~/tmp/scratch/Rtmps68VO5’   ‘~/tmp/scratch/RtmpsVC9KI’ ‘~/tmp/scratch/Rtmpsc43EQ’   ‘~/tmp/scratch/Rtmpt3F8GR’ ‘~/tmp/scratch/Rtmpt6ZDr4’   ‘~/tmp/scratch/RtmptE1yq9’ ‘~/tmp/scratch/RtmptFUqv4’   ‘~/tmp/scratch/RtmptnbbwR’ ‘~/tmp/scratch/RtmptzxFxf’   ‘~/tmp/scratch/RtmpuCMfOb’ ‘~/tmp/scratch/RtmpufNa5N’   ‘~/tmp/scratch/RtmpujYnnh’ ‘~/tmp/scratch/Rtmpuk3tRU’   ‘~/tmp/scratch/RtmpuoXpfY’ ‘~/tmp/scratch/Rtmpv1o9N6’   ‘~/tmp/scratch/Rtmpv9s8UR’ ‘~/tmp/scratch/Rtmpvf0p0j’   ‘~/tmp/scratch/Rtmpvmj9BC’ ‘~/tmp/scratch/RtmpwA2ZTD’   ‘~/tmp/scratch/RtmpwLSiAv’ ‘~/tmp/scratch/RtmpwTFkhx’   ‘~/tmp/scratch/Rtmpwe4rod’ ‘~/tmp/scratch/RtmpxE0vlM’   ‘~/tmp/scratch/RtmpxcVK6v’ ‘~/tmp/scratch/Rtmpxcoycn’   ‘~/tmp/scratch/RtmpxpXJcr’ ‘~/tmp/scratch/Rtmpy90bPE’   ‘~/tmp/scratch/RtmpycXX87’ ‘~/tmp/scratch/RtmpzIJynG’   ‘~/tmp/scratch/RtmpzsVatE’ ‘~/tmp/scratch/xvfb-run.0AnZY3’   ‘~/tmp/scratch/xvfb-run.0Ari3x’ ‘~/tmp/scratch/xvfb-run.0yoxqT’   ‘~/tmp/scratch/xvfb-run.2AXN5S’ ‘~/tmp/scratch/xvfb-run.3SXbZW’   ‘~/tmp/scratch/xvfb-run.3jnpHQ’ ‘~/tmp/scratch/xvfb-run.4C1QEy’   ‘~/tmp/scratch/xvfb-run.4oyuSU’ ‘~/tmp/scratch/xvfb-run.51DHBJ’   ‘~/tmp/scratch/xvfb-run.6rJXyc’ ‘~/tmp/scratch/xvfb-run.7hpaAc’   ‘~/tmp/scratch/xvfb-run.82IyKp’ ‘~/tmp/scratch/xvfb-run.8OOrLj’   ‘~/tmp/scratch/xvfb-run.8hfJj0’ ‘~/tmp/scratch/xvfb-run.9SqIUl’   ‘~/tmp/scratch/xvfb-run.9ieRUC’ ‘~/tmp/scratch/xvfb-run.9oeNdt’   ‘~/tmp/scratch/xvfb-run.9rT4b2’ ‘~/tmp/scratch/xvfb-run.ANMsBP’   ‘~/tmp/scratch/xvfb-run.ATFIBE’ ‘~/tmp/scratch/xvfb-run.BFoY01’   ‘~/tmp/scratch/xvfb-run.C9u9Ss’ ‘~/tmp/scratch/xvfb-run.CKPevA’   ‘~/tmp/scratch/xvfb-run.DWxdf1’ ‘~/tmp/scratch/xvfb-run.Db5tbP’   ‘~/tmp/scratch/xvfb-run.EcflGG’ ‘~/tmp/scratch/xvfb-run.Etabrl’   ‘~/tmp/scratch/xvfb-run.F1IIzj’ ‘~/tmp/scratch/xvfb-run.FI3m5u’   ‘~/tmp/scratch/xvfb-run.FjJavu’ ‘~/tmp/scratch/xvfb-run.FnFq2v’   ‘~/tmp/scratch/xvfb-run.GbIIkO’ ‘~/tmp/scratch/xvfb-run.H3gE5r’   ‘~/tmp/scratch/xvfb-run.IUd7Px’ ‘~/tmp/scratch/xvfb-run.J39zmS’   ‘~/tmp/scratch/xvfb-run.JLxbSk’ ‘~/tmp/scratch/xvfb-run.JRsrZM’   ‘~/tmp/scratch/xvfb-run.JifTtY’ ‘~/tmp/scratch/xvfb-run.KMAd1o’   ‘~/tmp/scratch/xvfb-run.KqgnhM’ ‘~/tmp/scratch/xvfb-run.L2DAIs’   ‘~/tmp/scratch/xvfb-run.Ljf3iG’ ‘~/tmp/scratch/xvfb-run.No1sNF’   ‘~/tmp/scratch/xvfb-run.PAJ7c0’ ‘~/tmp/scratch/xvfb-run.PoFSde’   ‘~/tmp/scratch/xvfb-run.QRGQx4’ ‘~/tmp/scratch/xvfb-run.RCGrOc’   ‘~/tmp/scratch/xvfb-run.RTuNnw’ ‘~/tmp/scratch/xvfb-run.UiZFCY’   ‘~/tmp/scratch/xvfb-run.Ur6qU7’ ‘~/tmp/scratch/xvfb-run.Wgrs7H’   ‘~/tmp/scratch/xvfb-run.WsgyrT’ ‘~/tmp/scratch/xvfb-run.XY34jS’   ‘~/tmp/scratch/xvfb-run.Xy0pBd’ ‘~/tmp/scratch/xvfb-run.Zrv1xu’   ‘~/tmp/scratch/xvfb-run.ZzGAaT’ ‘~/tmp/scratch/xvfb-run.c6qIVa’   ‘~/tmp/scratch/xvfb-run.fcHYNX’ ‘~/tmp/scratch/xvfb-run.gClJdx’   ‘~/tmp/scratch/xvfb-run.gxZ9pI’ ‘~/tmp/scratch/xvfb-run.hPVHFk’   ‘~/tmp/scratch/xvfb-run.j8aWro’ ‘~/tmp/scratch/xvfb-run.lDXXou’   ‘~/tmp/scratch/xvfb-run.lSbrQT’ ‘~/tmp/scratch/xvfb-run.oHonxx’   ‘~/tmp/scratch/xvfb-run.pQkyYc’ ‘~/tmp/scratch/xvfb-run.qVjifA’   ‘~/tmp/scratch/xvfb-run.rU9nkM’ ‘~/tmp/scratch/xvfb-run.u0dedi’   ‘~/tmp/scratch/xvfb-run.wJJDoH’ ‘~/tmp/scratch/xvfb-run.wWPN9r’   ‘~/tmp/scratch/xvfb-run.wgBOk0’ ‘~/tmp/scratch/xvfb-run.zCmUnR’   ‘~/tmp/scratch/xvfb-run.zoZG06’
• DONE

Status: 1 NOTE