• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 15:09:17 UTC
• checking for file ‘ggpedigree/DESCRIPTION’ ... OK
• this is package ‘ggpedigree’ version ‘1.2.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘ggpedigree’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [20s/23s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/9s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [105s/114s] OK   Running ‘testthat.R’ [105s/113s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [30s/35s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [2s/3s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0JDcLN’ ‘~/tmp/scratch/Rtmp0QnSOD’   ‘~/tmp/scratch/Rtmp0WH2YF’ ‘~/tmp/scratch/Rtmp0ykn8o’   ‘~/tmp/scratch/Rtmp0zIG27’ ‘~/tmp/scratch/Rtmp10jkXs’   ‘~/tmp/scratch/Rtmp1YiC1z’ ‘~/tmp/scratch/Rtmp1vZ6r6’   ‘~/tmp/scratch/Rtmp2Odp8U’ ‘~/tmp/scratch/Rtmp3wUzp2’   ‘~/tmp/scratch/Rtmp42Yk88’ ‘~/tmp/scratch/Rtmp4IdUWi’   ‘~/tmp/scratch/Rtmp5ETg2g’ ‘~/tmp/scratch/Rtmp5UcCjl’   ‘~/tmp/scratch/Rtmp5WpTVu’ ‘~/tmp/scratch/Rtmp6DPfzV’   ‘~/tmp/scratch/Rtmp6gGPRm’ ‘~/tmp/scratch/Rtmp6qCGhQ’   ‘~/tmp/scratch/Rtmp775OSd’ ‘~/tmp/scratch/Rtmp78A9Mu’   ‘~/tmp/scratch/Rtmp88VWQf’ ‘~/tmp/scratch/Rtmp8BtNWC’   ‘~/tmp/scratch/Rtmp8kgpVj’ ‘~/tmp/scratch/Rtmp8mg4FS’   ‘~/tmp/scratch/Rtmp9BROhD’ ‘~/tmp/scratch/Rtmp9obtNh’   ‘~/tmp/scratch/Rtmp9rH8Q8’ ‘~/tmp/scratch/Rtmp9rLvmF’   ‘~/tmp/scratch/RtmpA4hBKS’ ‘~/tmp/scratch/RtmpAJ5T6d’   ‘~/tmp/scratch/RtmpAWwIKa’ ‘~/tmp/scratch/RtmpAgcMVX’   ‘~/tmp/scratch/RtmpAlU9o0’ ‘~/tmp/scratch/RtmpBGipCe’   ‘~/tmp/scratch/RtmpBSUltO’ ‘~/tmp/scratch/RtmpBWF73N’   ‘~/tmp/scratch/RtmpC55mP2’ ‘~/tmp/scratch/RtmpCl2Ave’   ‘~/tmp/scratch/RtmpD02h4x’ ‘~/tmp/scratch/RtmpE2gSka’   ‘~/tmp/scratch/RtmpELKRYe’ ‘~/tmp/scratch/RtmpG8Vsxh’   ‘~/tmp/scratch/RtmpGOHn1d’ ‘~/tmp/scratch/RtmpGvZDm8’   ‘~/tmp/scratch/RtmpH2zpyQ’ ‘~/tmp/scratch/RtmpHysdW0’   ‘~/tmp/scratch/RtmpI0KLBl’ ‘~/tmp/scratch/RtmpI0SlJZ’   ‘~/tmp/scratch/RtmpIBafTk’ ‘~/tmp/scratch/RtmpIX3fPF’   ‘~/tmp/scratch/RtmpIvJfpw’ ‘~/tmp/scratch/RtmpJCa48k’   ‘~/tmp/scratch/RtmpJNFYoz’ ‘~/tmp/scratch/RtmpJY8Z51’   ‘~/tmp/scratch/RtmpJYrmAj’ ‘~/tmp/scratch/RtmpLPFJlI’   ‘~/tmp/scratch/RtmpLT85Ot’ ‘~/tmp/scratch/RtmpLg7BFX’   ‘~/tmp/scratch/RtmpN4Pgxp’ ‘~/tmp/scratch/RtmpNSI7dN’   ‘~/tmp/scratch/RtmpNdLhPm’ ‘~/tmp/scratch/RtmpOhrsEP’   ‘~/tmp/scratch/RtmpOsVbR4’ ‘~/tmp/scratch/RtmpP0V67Y’   ‘~/tmp/scratch/RtmpP2qCXf’ ‘~/tmp/scratch/RtmpPAEK7O’   ‘~/tmp/scratch/RtmpPCCi9w’ ‘~/tmp/scratch/RtmpPMo59k’   ‘~/tmp/scratch/RtmpPVFd15’ ‘~/tmp/scratch/RtmpPkuU4I’   ‘~/tmp/scratch/RtmpPvVLWu’ ‘~/tmp/scratch/RtmpPztoj9’   ‘~/tmp/scratch/RtmpQlurrB’ ‘~/tmp/scratch/RtmpQmTO9D’   ‘~/tmp/scratch/RtmpRmCBvs’ ‘~/tmp/scratch/RtmpSUCQbD’   ‘~/tmp/scratch/RtmpSqVVYl’ ‘~/tmp/scratch/RtmpTVqxoW’   ‘~/tmp/scratch/RtmpTjTA0b’ ‘~/tmp/scratch/RtmpTngcbh’   ‘~/tmp/scratch/RtmpU9P3u5’ ‘~/tmp/scratch/RtmpUM8X3A’   ‘~/tmp/scratch/RtmpUcNJfI’ ‘~/tmp/scratch/RtmpUycyfp’   ‘~/tmp/scratch/RtmpV9Alqj’ ‘~/tmp/scratch/RtmpVYavdM’   ‘~/tmp/scratch/RtmpVjWaNC’ ‘~/tmp/scratch/RtmpWW1QjU’   ‘~/tmp/scratch/RtmpXL2dP3’ ‘~/tmp/scratch/RtmpXkeiXD’   ‘~/tmp/scratch/RtmpZ8urs0’ ‘~/tmp/scratch/RtmpZItXp1’   ‘~/tmp/scratch/RtmpZsZVAu’ ‘~/tmp/scratch/RtmpaoILwV’   ‘~/tmp/scratch/RtmpaosPRi’ ‘~/tmp/scratch/RtmpawfEqb’   ‘~/tmp/scratch/Rtmpb9KSY2’ ‘~/tmp/scratch/RtmpbIX1MW’   ‘~/tmp/scratch/Rtmpbf9yN6’ ‘~/tmp/scratch/RtmpbpJd4C’   ‘~/tmp/scratch/Rtmpbrqbm9’ ‘~/tmp/scratch/Rtmpc3OvxC’   ‘~/tmp/scratch/Rtmpc6j271’ ‘~/tmp/scratch/RtmpcQrxCG’   ‘~/tmp/scratch/RtmpcSiahO’ ‘~/tmp/scratch/RtmpcgQbOZ’   ‘~/tmp/scratch/Rtmpckijf8’ ‘~/tmp/scratch/Rtmpd9zmbw’   ‘~/tmp/scratch/Rtmpem95a0’ ‘~/tmp/scratch/Rtmpg3qB9S’   ‘~/tmp/scratch/RtmpgdNwAP’ ‘~/tmp/scratch/RtmpgrGP5O’   ‘~/tmp/scratch/RtmphEMsBO’ ‘~/tmp/scratch/RtmphUG73G’   ‘~/tmp/scratch/RtmphwQNmV’ ‘~/tmp/scratch/RtmpiLtfMb’   ‘~/tmp/scratch/RtmpiQBChY’ ‘~/tmp/scratch/RtmpiiosxC’   ‘~/tmp/scratch/Rtmpik6n1N’ ‘~/tmp/scratch/RtmpizzNy5’   ‘~/tmp/scratch/Rtmpj2VODQ’ ‘~/tmp/scratch/RtmpjfPF14’   ‘~/tmp/scratch/RtmpkGWNig’ ‘~/tmp/scratch/RtmpkOWKAd’   ‘~/tmp/scratch/RtmpkVYR1g’ ‘~/tmp/scratch/Rtmpl28s2p’   ‘~/tmp/scratch/Rtmplk5N5l’ ‘~/tmp/scratch/Rtmpm0lVJ8’   ‘~/tmp/scratch/Rtmpm8nsCf’ ‘~/tmp/scratch/RtmpmN4olc’   ‘~/tmp/scratch/RtmpmYZdto’ ‘~/tmp/scratch/RtmpmkZ2Rk’   ‘~/tmp/scratch/RtmpnDG5E8’ ‘~/tmp/scratch/RtmpnF0RR1’   ‘~/tmp/scratch/RtmpnFghfS’ ‘~/tmp/scratch/RtmpoO0tlk’   ‘~/tmp/scratch/RtmpojSE8j’ ‘~/tmp/scratch/RtmporLMhB’   ‘~/tmp/scratch/RtmpqkEbdG’ ‘~/tmp/scratch/RtmprGptDz’   ‘~/tmp/scratch/RtmprHAdWf’ ‘~/tmp/scratch/RtmprHjA84’   ‘~/tmp/scratch/RtmprJYi6A’ ‘~/tmp/scratch/Rtmpri2XvW’   ‘~/tmp/scratch/RtmprsUXs1’ ‘~/tmp/scratch/RtmpsHYZhb’   ‘~/tmp/scratch/RtmpsyWX9q’ ‘~/tmp/scratch/Rtmpt0SU44’   ‘~/tmp/scratch/RtmptC6dDT’ ‘~/tmp/scratch/RtmptTwdj0’   ‘~/tmp/scratch/Rtmptd8t7j’ ‘~/tmp/scratch/RtmpubKYgJ’   ‘~/tmp/scratch/Rtmpuy1KHr’ ‘~/tmp/scratch/RtmpwgawTE’   ‘~/tmp/scratch/RtmpwmvW66’ ‘~/tmp/scratch/RtmpwvT3Lz’   ‘~/tmp/scratch/RtmpyFGosB’ ‘~/tmp/scratch/RtmpyHbpuo’   ‘~/tmp/scratch/RtmpyIZK44’ ‘~/tmp/scratch/RtmpyQS2nZ’   ‘~/tmp/scratch/RtmpydaAeJ’ ‘~/tmp/scratch/Rtmpynf46S’   ‘~/tmp/scratch/RtmpzqHswD’   ‘~/tmp/scratch/quarto-session4fcb26907572b0a8’   ‘~/tmp/scratch/quarto-sessionbbda8bc88b8c6cc0’   ‘~/tmp/scratch/xvfb-run.49YD5Q’ ‘~/tmp/scratch/xvfb-run.4BwpW8’   ‘~/tmp/scratch/xvfb-run.5dOCyl’ ‘~/tmp/scratch/xvfb-run.5gZjEs’   ‘~/tmp/scratch/xvfb-run.6VfjWs’ ‘~/tmp/scratch/xvfb-run.70F9XA’   ‘~/tmp/scratch/xvfb-run.7ZOQ8p’ ‘~/tmp/scratch/xvfb-run.8eKftx’   ‘~/tmp/scratch/xvfb-run.8nu28I’ ‘~/tmp/scratch/xvfb-run.94uun4’   ‘~/tmp/scratch/xvfb-run.99hRkD’ ‘~/tmp/scratch/xvfb-run.9BWrsu’   ‘~/tmp/scratch/xvfb-run.9bMyWc’ ‘~/tmp/scratch/xvfb-run.ASgHsV’   ‘~/tmp/scratch/xvfb-run.Ak34D7’ ‘~/tmp/scratch/xvfb-run.AnQ9oq’   ‘~/tmp/scratch/xvfb-run.AyzjhN’ ‘~/tmp/scratch/xvfb-run.BYftGz’   ‘~/tmp/scratch/xvfb-run.D0j7BR’ ‘~/tmp/scratch/xvfb-run.EQ18Hc’   ‘~/tmp/scratch/xvfb-run.FUa3kW’ ‘~/tmp/scratch/xvfb-run.FtJvqu’   ‘~/tmp/scratch/xvfb-run.HrIV0T’ ‘~/tmp/scratch/xvfb-run.IvM3Va’   ‘~/tmp/scratch/xvfb-run.IywGT2’ ‘~/tmp/scratch/xvfb-run.IzDq8m’   ‘~/tmp/scratch/xvfb-run.K3F11k’ ‘~/tmp/scratch/xvfb-run.MJHxLD’   ‘~/tmp/scratch/xvfb-run.N4BVj2’ ‘~/tmp/scratch/xvfb-run.NTBweb’   ‘~/tmp/scratch/xvfb-run.O8WV83’ ‘~/tmp/scratch/xvfb-run.OIcxOe’   ‘~/tmp/scratch/xvfb-run.PE0OTv’ ‘~/tmp/scratch/xvfb-run.Q0DTFn’   ‘~/tmp/scratch/xvfb-run.R9Mjhb’ ‘~/tmp/scratch/xvfb-run.RMEUaG’   ‘~/tmp/scratch/xvfb-run.RT7UGm’ ‘~/tmp/scratch/xvfb-run.SapKKW’   ‘~/tmp/scratch/xvfb-run.TiGpW6’ ‘~/tmp/scratch/xvfb-run.UBgVJA’   ‘~/tmp/scratch/xvfb-run.UUO84D’ ‘~/tmp/scratch/xvfb-run.Uo8Hgt’   ‘~/tmp/scratch/xvfb-run.VH4fay’ ‘~/tmp/scratch/xvfb-run.VNkKqz’   ‘~/tmp/scratch/xvfb-run.WnxORK’ ‘~/tmp/scratch/xvfb-run.XNhDnB’   ‘~/tmp/scratch/xvfb-run.Xkai4E’ ‘~/tmp/scratch/xvfb-run.Y4wMpE’   ‘~/tmp/scratch/xvfb-run.aHECh8’ ‘~/tmp/scratch/xvfb-run.bFImPo’   ‘~/tmp/scratch/xvfb-run.cxlh12’ ‘~/tmp/scratch/xvfb-run.ekWEfu’   ‘~/tmp/scratch/xvfb-run.fFCGTC’ ‘~/tmp/scratch/xvfb-run.gNiLIX’   ‘~/tmp/scratch/xvfb-run.iGSypA’ ‘~/tmp/scratch/xvfb-run.ljAEDJ’   ‘~/tmp/scratch/xvfb-run.lyeg3p’ ‘~/tmp/scratch/xvfb-run.lznkM6’   ‘~/tmp/scratch/xvfb-run.oirZI4’ ‘~/tmp/scratch/xvfb-run.pZ6Izu’   ‘~/tmp/scratch/xvfb-run.qGZuG0’ ‘~/tmp/scratch/xvfb-run.qGcRoV’   ‘~/tmp/scratch/xvfb-run.s605g4’ ‘~/tmp/scratch/xvfb-run.sX9nd1’   ‘~/tmp/scratch/xvfb-run.tct5Y0’ ‘~/tmp/scratch/xvfb-run.u3CkdQ’   ‘~/tmp/scratch/xvfb-run.un4FIS’ ‘~/tmp/scratch/xvfb-run.vHosBi’   ‘~/tmp/scratch/xvfb-run.xO2RfI’ ‘~/tmp/scratch/xvfb-run.xVsid0’   ‘~/tmp/scratch/xvfb-run.yB9NvJ’ ‘~/tmp/scratch/xvfb-run.yV49Py’
• DONE

Status: 1 NOTE