• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 15:04:13 UTC
• checking for file ‘geostan/DESCRIPTION’ ... OK
• this is package ‘geostan’ version ‘0.8.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘geostan’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking C++ specification ... INFO   specified C++17
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [5s/6s] OK
• checking whether the package can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the package can be unloaded cleanly ... [5s/6s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the namespace can be unloaded cleanly ... [6s/7s] OK
• checking loading without being on the library search path ... [8s/9s] OK
• checking whether startup messages can be suppressed ... [5s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [28s/38s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... INFO GNU make is a SystemRequirements.
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [37s/51s] OK Examples with CPU (user + system) or elapsed time > 5s           user system elapsed stan_car 3.874 0.025 5.296
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [80s/105s] OK   Running ‘check-ME-estimates-monte-carlo.R’ [12s/16s]   Running ‘check-SEM-CAR-GLM-estimates-monte-carlo.R’ [9s/13s]   Running ‘check-SLM-estimates-monte-carlo.R’ [12s/15s]   Running ‘check-glm-for-bias.R’ [0s/0s]   Running ‘missing-y.R’ [11s/13s]   Running ‘model-comparison.R’ [9s/10s]   Running ‘testthat.R’ [26s/37s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [102s/150s] OK
• checking PDF version of manual ... [6s/7s] OK
• checking HTML version of manual ... [3s/6s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0JDcLN’ ‘~/tmp/scratch/Rtmp0zIG27’   ‘~/tmp/scratch/Rtmp154oBx’ ‘~/tmp/scratch/Rtmp1jbtOq’   ‘~/tmp/scratch/Rtmp2Odp8U’ ‘~/tmp/scratch/Rtmp3CzFQr’   ‘~/tmp/scratch/Rtmp3aQjc9’ ‘~/tmp/scratch/Rtmp3wUzp2’   ‘~/tmp/scratch/Rtmp51G1CC’ ‘~/tmp/scratch/Rtmp5SDb7K’   ‘~/tmp/scratch/Rtmp6fLuoc’ ‘~/tmp/scratch/Rtmp6leXrg’   ‘~/tmp/scratch/Rtmp7WIMPw’ ‘~/tmp/scratch/Rtmp7dw2Vm’   ‘~/tmp/scratch/Rtmp7lyR1D’ ‘~/tmp/scratch/Rtmp8mg4FS’   ‘~/tmp/scratch/Rtmp9lj474’ ‘~/tmp/scratch/Rtmp9rH8Q8’   ‘~/tmp/scratch/Rtmp9rLvmF’ ‘~/tmp/scratch/RtmpA4hBKS’   ‘~/tmp/scratch/RtmpAUrNOy’ ‘~/tmp/scratch/RtmpAlU9o0’   ‘~/tmp/scratch/RtmpBGipCe’ ‘~/tmp/scratch/RtmpBPwcna’   ‘~/tmp/scratch/RtmpBSUltO’ ‘~/tmp/scratch/RtmpBpGF94’   ‘~/tmp/scratch/RtmpCAA1DY’ ‘~/tmp/scratch/RtmpCV7ygc’   ‘~/tmp/scratch/RtmpCY3rJ8’ ‘~/tmp/scratch/RtmpCl2Ave’   ‘~/tmp/scratch/RtmpCv1QgS’ ‘~/tmp/scratch/RtmpDRA8Pw’   ‘~/tmp/scratch/RtmpE2gSka’ ‘~/tmp/scratch/RtmpEuaA72’   ‘~/tmp/scratch/RtmpFNTSHq’ ‘~/tmp/scratch/RtmpFVg12p’   ‘~/tmp/scratch/RtmpG8Vsxh’ ‘~/tmp/scratch/RtmpGAznJh’   ‘~/tmp/scratch/RtmpGOHn1d’ ‘~/tmp/scratch/RtmpGZN7yQ’   ‘~/tmp/scratch/RtmpGvZDm8’ ‘~/tmp/scratch/RtmpH2zpyQ’   ‘~/tmp/scratch/RtmpHdEzFy’ ‘~/tmp/scratch/RtmpHysdW0’   ‘~/tmp/scratch/RtmpI0SlJZ’ ‘~/tmp/scratch/RtmpI4iXF1’   ‘~/tmp/scratch/RtmpIvJfpw’ ‘~/tmp/scratch/RtmpJCa48k’   ‘~/tmp/scratch/RtmpJOdeSl’ ‘~/tmp/scratch/RtmpJY8Z51’   ‘~/tmp/scratch/RtmpJn9Hos’ ‘~/tmp/scratch/RtmpKNuvah’   ‘~/tmp/scratch/RtmpKzB9U1’ ‘~/tmp/scratch/RtmpLT85Ot’   ‘~/tmp/scratch/RtmpLg7BFX’ ‘~/tmp/scratch/RtmpMNxexJ’   ‘~/tmp/scratch/RtmpMRXEEh’ ‘~/tmp/scratch/RtmpMn6iHQ’   ‘~/tmp/scratch/RtmpN4Pgxp’ ‘~/tmp/scratch/RtmpNH1Q86’   ‘~/tmp/scratch/RtmpNSI7dN’ ‘~/tmp/scratch/RtmpP2qCXf’   ‘~/tmp/scratch/RtmpPCCi9w’ ‘~/tmp/scratch/RtmpPSRdEP’   ‘~/tmp/scratch/RtmpPVFd15’ ‘~/tmp/scratch/RtmpPbOleM’   ‘~/tmp/scratch/RtmpPf5fMd’ ‘~/tmp/scratch/RtmpPiLnHq’   ‘~/tmp/scratch/RtmpPtJstU’ ‘~/tmp/scratch/RtmpPvVLWu’   ‘~/tmp/scratch/RtmpQIGngm’ ‘~/tmp/scratch/RtmpQZYbfH’   ‘~/tmp/scratch/RtmpQlurrB’ ‘~/tmp/scratch/RtmpQmTO9D’   ‘~/tmp/scratch/RtmpRmCBvs’ ‘~/tmp/scratch/RtmpRrmVRV’   ‘~/tmp/scratch/RtmpSOZmxv’ ‘~/tmp/scratch/RtmpSe5sdh’   ‘~/tmp/scratch/RtmpSqVVYl’ ‘~/tmp/scratch/RtmpTUnqgF’   ‘~/tmp/scratch/RtmpTd9XUS’ ‘~/tmp/scratch/RtmpTngcbh’   ‘~/tmp/scratch/RtmpUM8X3A’ ‘~/tmp/scratch/RtmpUQmjry’   ‘~/tmp/scratch/RtmpUyUFxv’ ‘~/tmp/scratch/RtmpVKGTCS’   ‘~/tmp/scratch/RtmpVjWaNC’ ‘~/tmp/scratch/RtmpWQ1wOf’   ‘~/tmp/scratch/RtmpWivCgF’ ‘~/tmp/scratch/RtmpWmCbAE’   ‘~/tmp/scratch/RtmpXL2dP3’ ‘~/tmp/scratch/RtmpXdHP9T’   ‘~/tmp/scratch/RtmpXkeiXD’ ‘~/tmp/scratch/RtmpXyjzEA’   ‘~/tmp/scratch/RtmpYFTsUS’ ‘~/tmp/scratch/RtmpYIoNs2’   ‘~/tmp/scratch/RtmpYSr5nF’ ‘~/tmp/scratch/RtmpZ8urs0’   ‘~/tmp/scratch/RtmpZsZVAu’ ‘~/tmp/scratch/RtmpaD36Ar’   ‘~/tmp/scratch/RtmpadsjSr’ ‘~/tmp/scratch/RtmpaosPRi’   ‘~/tmp/scratch/Rtmpaq1WTh’ ‘~/tmp/scratch/Rtmpb9KSY2’   ‘~/tmp/scratch/RtmpbIX1MW’ ‘~/tmp/scratch/RtmpbJPHuI’   ‘~/tmp/scratch/RtmpbMWmKJ’ ‘~/tmp/scratch/Rtmpc3OvxC’   ‘~/tmp/scratch/RtmpcCHaBA’ ‘~/tmp/scratch/RtmpcF9Gkk’   ‘~/tmp/scratch/RtmpcQrxCG’ ‘~/tmp/scratch/Rtmpckijf8’   ‘~/tmp/scratch/Rtmpd63ZSa’ ‘~/tmp/scratch/RtmpdGywzT’   ‘~/tmp/scratch/RtmpdJ7mHR’ ‘~/tmp/scratch/RtmpdNS351’   ‘~/tmp/scratch/RtmpdRGFkQ’ ‘~/tmp/scratch/Rtmpdv52Xu’   ‘~/tmp/scratch/RtmpeWHZMb’ ‘~/tmp/scratch/Rtmpem95a0’   ‘~/tmp/scratch/RtmpeoqmjY’ ‘~/tmp/scratch/RtmpfZ7s0p’   ‘~/tmp/scratch/Rtmpfpa6sb’ ‘~/tmp/scratch/RtmpgrGP5O’   ‘~/tmp/scratch/RtmpiApFzR’ ‘~/tmp/scratch/RtmpiJCiat’   ‘~/tmp/scratch/Rtmpihq7R9’ ‘~/tmp/scratch/Rtmpik6n1N’   ‘~/tmp/scratch/RtmpitzKCf’ ‘~/tmp/scratch/RtmpizzNy5’   ‘~/tmp/scratch/RtmpjYyZgi’ ‘~/tmp/scratch/RtmpjfPF14’   ‘~/tmp/scratch/RtmpjjvtL2’ ‘~/tmp/scratch/RtmpjscJWj’   ‘~/tmp/scratch/RtmpkmYTT4’ ‘~/tmp/scratch/Rtmpl1UKsR’   ‘~/tmp/scratch/Rtmplk5N5l’ ‘~/tmp/scratch/Rtmpm7k5vH’   ‘~/tmp/scratch/Rtmpm8nsCf’ ‘~/tmp/scratch/Rtmpm9yzOy’   ‘~/tmp/scratch/RtmpmN4olc’ ‘~/tmp/scratch/RtmpmYZdto’   ‘~/tmp/scratch/RtmpmkZ2Rk’ ‘~/tmp/scratch/RtmpnDG5E8’   ‘~/tmp/scratch/RtmpnFghfS’ ‘~/tmp/scratch/RtmpnJQNFF’   ‘~/tmp/scratch/RtmpoURpbM’ ‘~/tmp/scratch/RtmpobCse2’   ‘~/tmp/scratch/RtmpojSE8j’ ‘~/tmp/scratch/RtmpoymOd7’   ‘~/tmp/scratch/RtmppLWFro’ ‘~/tmp/scratch/RtmppWINAT’   ‘~/tmp/scratch/RtmppaFyvh’ ‘~/tmp/scratch/RtmppdhAcA’   ‘~/tmp/scratch/Rtmppmdc9z’ ‘~/tmp/scratch/RtmprHAdWf’   ‘~/tmp/scratch/Rtmpri2XvW’ ‘~/tmp/scratch/RtmprwzjKl’   ‘~/tmp/scratch/Rtmps27YlB’ ‘~/tmp/scratch/RtmpsHYZhb’   ‘~/tmp/scratch/RtmpsYgCns’ ‘~/tmp/scratch/RtmpsyWX9q’   ‘~/tmp/scratch/Rtmpt1SJvJ’ ‘~/tmp/scratch/Rtmpt8TgVi’   ‘~/tmp/scratch/Rtmptm7v1J’ ‘~/tmp/scratch/RtmpuCcSlp’   ‘~/tmp/scratch/RtmpuQRjAS’ ‘~/tmp/scratch/RtmpuR7w2u’   ‘~/tmp/scratch/RtmpubKYgJ’ ‘~/tmp/scratch/RtmpuvwVZB’   ‘~/tmp/scratch/Rtmpuy1KHr’ ‘~/tmp/scratch/RtmpvXY4tU’   ‘~/tmp/scratch/Rtmpy2Db45’ ‘~/tmp/scratch/RtmpyEkyFF’   ‘~/tmp/scratch/RtmpyFGosB’ ‘~/tmp/scratch/Rtmpynf46S’   ‘~/tmp/scratch/RtmpzQoa3E’ ‘~/tmp/scratch/RtmpzR4DLF’   ‘~/tmp/scratch/Rtmpzzbfwm’   ‘~/tmp/scratch/quarto-sessionc492dab9f2c23cda’   ‘~/tmp/scratch/xvfb-run.0DDuvp’ ‘~/tmp/scratch/xvfb-run.0Iek1d’   ‘~/tmp/scratch/xvfb-run.2HKGm4’ ‘~/tmp/scratch/xvfb-run.4BwpW8’   ‘~/tmp/scratch/xvfb-run.4vmaWa’ ‘~/tmp/scratch/xvfb-run.5gZjEs’   ‘~/tmp/scratch/xvfb-run.6hoj8o’ ‘~/tmp/scratch/xvfb-run.70F9XA’   ‘~/tmp/scratch/xvfb-run.7j6D87’ ‘~/tmp/scratch/xvfb-run.8eKftx’   ‘~/tmp/scratch/xvfb-run.8nu28I’ ‘~/tmp/scratch/xvfb-run.8xxzsN’   ‘~/tmp/scratch/xvfb-run.94uun4’ ‘~/tmp/scratch/xvfb-run.99hRkD’   ‘~/tmp/scratch/xvfb-run.9BWrsu’ ‘~/tmp/scratch/xvfb-run.9bMyWc’   ‘~/tmp/scratch/xvfb-run.A92CK8’ ‘~/tmp/scratch/xvfb-run.ASgHsV’   ‘~/tmp/scratch/xvfb-run.AsRYvw’ ‘~/tmp/scratch/xvfb-run.BYftGz’   ‘~/tmp/scratch/xvfb-run.EQ18Hc’ ‘~/tmp/scratch/xvfb-run.EtOgXD’   ‘~/tmp/scratch/xvfb-run.FUa3kW’ ‘~/tmp/scratch/xvfb-run.FtJvqu’   ‘~/tmp/scratch/xvfb-run.IvM3Va’ ‘~/tmp/scratch/xvfb-run.IywGT2’   ‘~/tmp/scratch/xvfb-run.IzDq8m’ ‘~/tmp/scratch/xvfb-run.JYmnt6’   ‘~/tmp/scratch/xvfb-run.K3F11k’ ‘~/tmp/scratch/xvfb-run.K8oNby’   ‘~/tmp/scratch/xvfb-run.KrNebT’ ‘~/tmp/scratch/xvfb-run.LAFwfm’   ‘~/tmp/scratch/xvfb-run.MKwQHe’ ‘~/tmp/scratch/xvfb-run.MpH4C8’   ‘~/tmp/scratch/xvfb-run.MtMC4J’ ‘~/tmp/scratch/xvfb-run.N4BVj2’   ‘~/tmp/scratch/xvfb-run.NTBweb’ ‘~/tmp/scratch/xvfb-run.NYHqYX’   ‘~/tmp/scratch/xvfb-run.Q0DTFn’ ‘~/tmp/scratch/xvfb-run.RT7UGm’   ‘~/tmp/scratch/xvfb-run.SapKKW’ ‘~/tmp/scratch/xvfb-run.SiKTIb’   ‘~/tmp/scratch/xvfb-run.Taydxg’ ‘~/tmp/scratch/xvfb-run.Uo8Hgt’   ‘~/tmp/scratch/xvfb-run.VH4fay’ ‘~/tmp/scratch/xvfb-run.WKGF90’   ‘~/tmp/scratch/xvfb-run.WnxORK’ ‘~/tmp/scratch/xvfb-run.Xkai4E’   ‘~/tmp/scratch/xvfb-run.Y4wMpE’ ‘~/tmp/scratch/xvfb-run.Zki5cF’   ‘~/tmp/scratch/xvfb-run.aHECh8’ ‘~/tmp/scratch/xvfb-run.bAjlk6’   ‘~/tmp/scratch/xvfb-run.bFImPo’ ‘~/tmp/scratch/xvfb-run.c8NmBB’   ‘~/tmp/scratch/xvfb-run.crhRIe’ ‘~/tmp/scratch/xvfb-run.dQJ2D5’   ‘~/tmp/scratch/xvfb-run.ekWEfu’ ‘~/tmp/scratch/xvfb-run.fipiQ4’   ‘~/tmp/scratch/xvfb-run.gNiLIX’ ‘~/tmp/scratch/xvfb-run.idNq9X’   ‘~/tmp/scratch/xvfb-run.igK093’ ‘~/tmp/scratch/xvfb-run.kG6326’   ‘~/tmp/scratch/xvfb-run.lXQTlL’ ‘~/tmp/scratch/xvfb-run.lyeg3p’   ‘~/tmp/scratch/xvfb-run.lznkM6’ ‘~/tmp/scratch/xvfb-run.nGgsOL’   ‘~/tmp/scratch/xvfb-run.pZ6Izu’ ‘~/tmp/scratch/xvfb-run.s605g4’   ‘~/tmp/scratch/xvfb-run.sOG7iS’ ‘~/tmp/scratch/xvfb-run.sW9982’   ‘~/tmp/scratch/xvfb-run.tct5Y0’ ‘~/tmp/scratch/xvfb-run.vHosBi’   ‘~/tmp/scratch/xvfb-run.wYSvdX’ ‘~/tmp/scratch/xvfb-run.xO2RfI’   ‘~/tmp/scratch/xvfb-run.xVsid0’
• DONE

Status: 1 NOTE