• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 14:56:27 UTC
• checking for file ‘freesurfer/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘freesurfer’ version ‘1.8.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] NOTE Maintainer: ‘John Muschelli <muschellij2@gmail.com>’ Problems when reading CITATION file:   Replacing special names ‘.Names’ is deprecated; use ‘names’ instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘freesurfer’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/10s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/5s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0nHxLk’ ‘~/tmp/scratch/Rtmp1SfJus’   ‘~/tmp/scratch/Rtmp2G5V45’ ‘~/tmp/scratch/Rtmp2fosoy’   ‘~/tmp/scratch/Rtmp3LD1FK’ ‘~/tmp/scratch/Rtmp46u3iO’   ‘~/tmp/scratch/Rtmp5KfYBg’ ‘~/tmp/scratch/Rtmp5PNSkt’   ‘~/tmp/scratch/Rtmp5ZwW9V’ ‘~/tmp/scratch/Rtmp60P5MO’   ‘~/tmp/scratch/Rtmp6Tz4Bd’ ‘~/tmp/scratch/Rtmp6ySpBD’   ‘~/tmp/scratch/Rtmp75fo2Z’ ‘~/tmp/scratch/Rtmp7KjiwQ’   ‘~/tmp/scratch/Rtmp7oT0BV’ ‘~/tmp/scratch/Rtmp7wBaa6’   ‘~/tmp/scratch/Rtmp9ZCqXJ’ ‘~/tmp/scratch/RtmpA5crry’   ‘~/tmp/scratch/RtmpAb4hw2’ ‘~/tmp/scratch/RtmpBa2ad4’   ‘~/tmp/scratch/RtmpCDsFKq’ ‘~/tmp/scratch/RtmpCeHWGG’   ‘~/tmp/scratch/RtmpDY9GJ6’ ‘~/tmp/scratch/RtmpESjnB4’   ‘~/tmp/scratch/RtmpESoEhb’ ‘~/tmp/scratch/RtmpEW0M25’   ‘~/tmp/scratch/RtmpEeWxYR’ ‘~/tmp/scratch/RtmpFo1e7I’   ‘~/tmp/scratch/RtmpGOk5bg’ ‘~/tmp/scratch/RtmpGTcHYH’   ‘~/tmp/scratch/RtmpGr2oUn’ ‘~/tmp/scratch/RtmpHKn43v’   ‘~/tmp/scratch/RtmpHO6t5M’ ‘~/tmp/scratch/RtmpI2M6ld’   ‘~/tmp/scratch/RtmpIgRxwx’ ‘~/tmp/scratch/RtmpJ34M6T’   ‘~/tmp/scratch/RtmpJ8Qy0j’ ‘~/tmp/scratch/RtmpJWpgEg’   ‘~/tmp/scratch/RtmpKXtkAq’ ‘~/tmp/scratch/RtmpKf8WBL’   ‘~/tmp/scratch/RtmpLGfSoC’ ‘~/tmp/scratch/RtmpLmKkcP’   ‘~/tmp/scratch/RtmpMpxiR4’ ‘~/tmp/scratch/RtmpNKsNnt’   ‘~/tmp/scratch/RtmpNQtJPw’ ‘~/tmp/scratch/RtmpNTFwse’   ‘~/tmp/scratch/RtmpNx8rdb’ ‘~/tmp/scratch/RtmpORTEc9’   ‘~/tmp/scratch/RtmpOtUWKM’ ‘~/tmp/scratch/RtmpOuvCfS’   ‘~/tmp/scratch/RtmpPRzdP0’ ‘~/tmp/scratch/RtmpPXLL2P’   ‘~/tmp/scratch/RtmpQ3x5TJ’ ‘~/tmp/scratch/RtmpQBaOjy’   ‘~/tmp/scratch/RtmpRy1yyB’ ‘~/tmp/scratch/RtmpRyh4H5’   ‘~/tmp/scratch/RtmpS1ft1F’ ‘~/tmp/scratch/RtmpS6bBXB’   ‘~/tmp/scratch/RtmpSRSR29’ ‘~/tmp/scratch/RtmpSpZR7d’   ‘~/tmp/scratch/RtmpSwBz77’ ‘~/tmp/scratch/RtmpTa3QgR’   ‘~/tmp/scratch/RtmpThmj2K’ ‘~/tmp/scratch/RtmpTyJ79E’   ‘~/tmp/scratch/RtmpViX0mZ’ ‘~/tmp/scratch/RtmpW6HX9V’   ‘~/tmp/scratch/RtmpWckv0S’ ‘~/tmp/scratch/RtmpWdzyr5’   ‘~/tmp/scratch/RtmpXYqt3K’ ‘~/tmp/scratch/RtmpXlcWQR’   ‘~/tmp/scratch/RtmpXz563R’ ‘~/tmp/scratch/RtmpYBaxNc’   ‘~/tmp/scratch/RtmpYKp5tH’ ‘~/tmp/scratch/RtmpYvW7cj’   ‘~/tmp/scratch/RtmpZGM5IW’ ‘~/tmp/scratch/RtmpaCy1V3’   ‘~/tmp/scratch/RtmpaJR1cD’ ‘~/tmp/scratch/Rtmpb0nhUr’   ‘~/tmp/scratch/RtmpbHykAW’ ‘~/tmp/scratch/RtmpbKUMnC’   ‘~/tmp/scratch/Rtmpc6zcau’ ‘~/tmp/scratch/RtmpcNfNCg’   ‘~/tmp/scratch/RtmpcrRj79’ ‘~/tmp/scratch/RtmpctoQEJ’   ‘~/tmp/scratch/RtmpdcFOzi’ ‘~/tmp/scratch/RtmpdxLKAh’   ‘~/tmp/scratch/Rtmpe9EYZI’ ‘~/tmp/scratch/RtmpeuyBY6’   ‘~/tmp/scratch/RtmpewK6j1’ ‘~/tmp/scratch/Rtmpfh70Oz’   ‘~/tmp/scratch/RtmpfhWtGK’ ‘~/tmp/scratch/RtmphQ3pBL’   ‘~/tmp/scratch/Rtmphn79Nf’ ‘~/tmp/scratch/RtmpiGrEE3’   ‘~/tmp/scratch/RtmpkB0ufJ’ ‘~/tmp/scratch/RtmpkEDAV3’   ‘~/tmp/scratch/RtmpkYCmfk’ ‘~/tmp/scratch/Rtmpkwl624’   ‘~/tmp/scratch/RtmplAflEw’ ‘~/tmp/scratch/RtmplTLYUx’   ‘~/tmp/scratch/RtmpllxOXo’ ‘~/tmp/scratch/Rtmplqk8zI’   ‘~/tmp/scratch/RtmpltB5Y4’ ‘~/tmp/scratch/RtmpmOnvf7’   ‘~/tmp/scratch/RtmpmjFlcQ’ ‘~/tmp/scratch/Rtmpnd5BaB’   ‘~/tmp/scratch/Rtmpo9u76k’ ‘~/tmp/scratch/Rtmpp0GSfi’   ‘~/tmp/scratch/Rtmppe8edQ’ ‘~/tmp/scratch/RtmpphPZbL’   ‘~/tmp/scratch/RtmppjwVwB’ ‘~/tmp/scratch/RtmpsTK2sT’   ‘~/tmp/scratch/Rtmpt3TQjR’ ‘~/tmp/scratch/Rtmpt5TJjq’   ‘~/tmp/scratch/RtmptO1xZI’ ‘~/tmp/scratch/RtmptVYKZ1’   ‘~/tmp/scratch/Rtmptrupw3’ ‘~/tmp/scratch/Rtmpu0guGR’   ‘~/tmp/scratch/RtmpuLgiVW’ ‘~/tmp/scratch/RtmpuN581p’   ‘~/tmp/scratch/Rtmpv2HRj2’ ‘~/tmp/scratch/Rtmpv6EIfQ’   ‘~/tmp/scratch/Rtmpv9CzKI’ ‘~/tmp/scratch/RtmpvAcmZc’   ‘~/tmp/scratch/Rtmpvtow2E’ ‘~/tmp/scratch/RtmpxAUm0N’   ‘~/tmp/scratch/RtmpyPWiTB’ ‘~/tmp/scratch/RtmpyvZWbn’   ‘~/tmp/scratch/RtmpzGn5tx’ ‘~/tmp/scratch/RtmpzhIeDG’   ‘~/tmp/scratch/ccZYHlmd.s’ ‘~/tmp/scratch/cct2pv3m.s’   ‘~/tmp/scratch/xvfb-run.3MrFCm’ ‘~/tmp/scratch/xvfb-run.3z6Eqj’   ‘~/tmp/scratch/xvfb-run.5AaORF’ ‘~/tmp/scratch/xvfb-run.6U7yxs’   ‘~/tmp/scratch/xvfb-run.6oII5k’ ‘~/tmp/scratch/xvfb-run.9x2XDy’   ‘~/tmp/scratch/xvfb-run.AohlzV’ ‘~/tmp/scratch/xvfb-run.C87ygu’   ‘~/tmp/scratch/xvfb-run.CCnfyp’ ‘~/tmp/scratch/xvfb-run.CIfBsL’   ‘~/tmp/scratch/xvfb-run.DlYSXU’ ‘~/tmp/scratch/xvfb-run.EA9ORv’   ‘~/tmp/scratch/xvfb-run.F6Olpj’ ‘~/tmp/scratch/xvfb-run.FI4CT1’   ‘~/tmp/scratch/xvfb-run.GrmvJI’ ‘~/tmp/scratch/xvfb-run.GxU2zY’   ‘~/tmp/scratch/xvfb-run.HckwWj’ ‘~/tmp/scratch/xvfb-run.HlKJPf’   ‘~/tmp/scratch/xvfb-run.NIRlwY’ ‘~/tmp/scratch/xvfb-run.NmyrMH’   ‘~/tmp/scratch/xvfb-run.P0UDEp’ ‘~/tmp/scratch/xvfb-run.Qn8IIc’   ‘~/tmp/scratch/xvfb-run.RCmabp’ ‘~/tmp/scratch/xvfb-run.Vrw4vg’   ‘~/tmp/scratch/xvfb-run.W2xcMF’ ‘~/tmp/scratch/xvfb-run.WXb0fC’   ‘~/tmp/scratch/xvfb-run.ZLxV7D’ ‘~/tmp/scratch/xvfb-run.Zm6PSh’   ‘~/tmp/scratch/xvfb-run.aljBw9’ ‘~/tmp/scratch/xvfb-run.dnoZxL’   ‘~/tmp/scratch/xvfb-run.eJceK7’ ‘~/tmp/scratch/xvfb-run.gnDOLZ’   ‘~/tmp/scratch/xvfb-run.hg7dpr’ ‘~/tmp/scratch/xvfb-run.jHAYcX’   ‘~/tmp/scratch/xvfb-run.juNamq’ ‘~/tmp/scratch/xvfb-run.moraoX’   ‘~/tmp/scratch/xvfb-run.n3Bi6M’ ‘~/tmp/scratch/xvfb-run.oxFIKa’   ‘~/tmp/scratch/xvfb-run.sCj5ON’ ‘~/tmp/scratch/xvfb-run.tMJW8Z’   ‘~/tmp/scratch/xvfb-run.tWyWlA’ ‘~/tmp/scratch/xvfb-run.thNn0l’   ‘~/tmp/scratch/xvfb-run.ty99cg’ ‘~/tmp/scratch/xvfb-run.vLDpjA’   ‘~/tmp/scratch/xvfb-run.x4HxI6’
• DONE

Status: 2 NOTEs