- using R Under development (unstable) (2025-12-19 r89206)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-11) 15.2.0
GNU Fortran (Debian 15.2.0-11) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘flexlsx/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘flexlsx’ version ‘0.3.5’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘flexlsx’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/7s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [1s/2s] ERROR
Running examples in ‘flexlsx-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: wb_add_flextable
> ### Title: Adds a flextable to an openxlsx2 workbook sheet
> ### Aliases: wb_add_flextable
>
> ### ** Examples
>
>
> if (requireNamespace("flextable", quietly = TRUE)) {
+ # Create a flextable
+ ft <- flextable::as_flextable(table(mtcars[, c("am", "cyl")]))
+
+ # Create a workbook
+ wb <- openxlsx2::wb_workbook()$add_worksheet("mtcars")
+
+ # Add flextable to workbook
+ wb <- wb_add_flextable(wb, "mtcars", ft)
+
+ # Workbook can now be saved wb$save(),
+ # opened wb$open() - or removed
+ rm(wb)
+ }
Error in `[.data.table`(as.data.table(x), , `:=`(c("cts"), .N), by = c(columns, :
attempt access index 9/9 in VECTOR_ELT
Calls: <Anonymous> ... as_flextable.table -> proc_freq -> tabulator -> [ -> [.data.table
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [18s/21s] ERROR
Running ‘testthat.R’ [17s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(flexlsx)
>
> test_check("flexlsx")
Saving _problems/test-ft_to_style-5.R
Saving _problems/test-ft_to_style-24.R
Saving _problems/test-wb_add_flextable-142.R
Saving _problems/test-wb_add_flextable-178.R
[ FAIL 4 | WARN 0 | SKIP 2 | PASS 46 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• Sys.getenv("flexlsxtestdir") == "" is TRUE (2):
'test-wb_add_flextable.R:408:3', 'test-wb_add_flextable.R:430:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-ft_to_style.R:5:3'): ft_to_style_tibble does not break ─────────
Error in ``[.data.table`(as.data.table(x), , `:=`(c("cts"), .N), by = c(columns, rows))`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─flextable::as_flextable(table(mtcars[, 1:2])) at test-ft_to_style.R:5:3
2. └─flextable:::as_flextable.table(table(mtcars[, 1:2]))
3. └─flextable::proc_freq(...)
4. └─flextable::tabulator(...)
5. ├─as.data.table(x)[, `:=`(c("cts"), .N), by = c(columns, rows)]
6. └─data.table:::`[.data.table`(...)
── Error ('test-ft_to_style.R:24:3'): ft_to_style_tibble does not break with offsets ──
Error in ``[.data.table`(as.data.table(x), , `:=`(c("cts"), .N), by = c(columns, rows))`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─flextable::as_flextable(table(mtcars[, 1:2])) at test-ft_to_style.R:24:3
2. └─flextable:::as_flextable.table(table(mtcars[, 1:2]))
3. └─flextable::proc_freq(...)
4. └─flextable::tabulator(...)
5. ├─as.data.table(x)[, `:=`(c("cts"), .N), by = c(columns, rows)]
6. └─data.table:::`[.data.table`(...)
── Error ('test-wb_add_flextable.R:142:3'): using openxlsx2::current_sheet() works ──
Error in ``[.data.table`(as.data.table(x), , `:=`(c("cts"), .N), by = c(columns, rows))`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─flextable::as_flextable(table(mtcars[, 1:2])) at test-wb_add_flextable.R:142:3
2. └─flextable:::as_flextable.table(table(mtcars[, 1:2]))
3. └─flextable::proc_freq(...)
4. └─flextable::tabulator(...)
5. ├─as.data.table(x)[, `:=`(c("cts"), .N), by = c(columns, rows)]
6. └─data.table:::`[.data.table`(...)
── Error ('test-wb_add_flextable.R:178:3'): When sheet does not exists throws an error ──
Error in ``[.data.table`(as.data.table(x), , `:=`(c("cts"), .N), by = c(columns, rows))`: attempt access index 9/9 in VECTOR_ELT
Backtrace:
▆
1. ├─flextable::as_flextable(table(mtcars[, 1:2])) at test-wb_add_flextable.R:178:3
2. └─flextable:::as_flextable.table(table(mtcars[, 1:2]))
3. └─flextable::proc_freq(...)
4. └─flextable::tabulator(...)
5. ├─as.data.table(x)[, `:=`(c("cts"), .N), by = c(columns, rows)]
6. └─data.table:::`[.data.table`(...)
[ FAIL 4 | WARN 0 | SKIP 2 | PASS 46 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [5s/6s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 2 ERRORs