• using R Under development (unstable) (2026-08-01 r90334)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-02 14:47:49 UTC
• checking for file ‘fence/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘fence’ version ‘1.0’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Thuan Nguyen <nguythua@ohsu.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Jiming",                       family = "Jiang",                       role = "aut"),                person(given = "Jianyang",                       family = "Zhao",                       role = "aut"),                person(given = c("J.", "Sunil"),                       family = "Rao",                       role = "aut"),                person(given = "Thuan",                       family = "Nguyen",                       role = c("aut", "cre"),                       email = "nguythua@ohsu.edu")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘fence’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/5s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [17s/20s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [3s/3s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0bgK8N’ ‘~/tmp/scratch/Rtmp0pLSWS’   ‘~/tmp/scratch/Rtmp1JUxEN’ ‘~/tmp/scratch/Rtmp1vYDAk’   ‘~/tmp/scratch/Rtmp23fbKi’ ‘~/tmp/scratch/Rtmp3xd9cZ’   ‘~/tmp/scratch/Rtmp4IqYA4’ ‘~/tmp/scratch/Rtmp4SKnDN’   ‘~/tmp/scratch/Rtmp4lYv6K’ ‘~/tmp/scratch/Rtmp4rcbFq’   ‘~/tmp/scratch/Rtmp51MoR3’ ‘~/tmp/scratch/Rtmp5DI2Cs’   ‘~/tmp/scratch/Rtmp5WEJRX’ ‘~/tmp/scratch/Rtmp5aPVA9’   ‘~/tmp/scratch/Rtmp5tYFGf’ ‘~/tmp/scratch/Rtmp6JUfML’   ‘~/tmp/scratch/Rtmp7SKire’ ‘~/tmp/scratch/Rtmp8Zbx2G’   ‘~/tmp/scratch/Rtmp8dGpEB’ ‘~/tmp/scratch/Rtmp8thZWc’   ‘~/tmp/scratch/Rtmp8zcYd4’ ‘~/tmp/scratch/Rtmp91liKV’   ‘~/tmp/scratch/Rtmp9YNrjB’ ‘~/tmp/scratch/Rtmp9tYWfC’   ‘~/tmp/scratch/RtmpAggYdt’ ‘~/tmp/scratch/RtmpB6RBAg’   ‘~/tmp/scratch/RtmpBx5Oqi’ ‘~/tmp/scratch/RtmpCsERAa’   ‘~/tmp/scratch/RtmpCtoPFj’ ‘~/tmp/scratch/RtmpE90MGU’   ‘~/tmp/scratch/RtmpEDQh3m’ ‘~/tmp/scratch/RtmpEqa4At’   ‘~/tmp/scratch/RtmpFFhaIG’ ‘~/tmp/scratch/RtmpFXs3IZ’   ‘~/tmp/scratch/RtmpFiw1XZ’ ‘~/tmp/scratch/RtmpFkmU0o’   ‘~/tmp/scratch/RtmpGklmB3’ ‘~/tmp/scratch/RtmpH4zOHE’   ‘~/tmp/scratch/RtmpHLyIrg’ ‘~/tmp/scratch/RtmpHVsLsY’   ‘~/tmp/scratch/RtmpHhy3Js’ ‘~/tmp/scratch/RtmpJ1HoAW’   ‘~/tmp/scratch/RtmpJS6HhV’ ‘~/tmp/scratch/RtmpJlfkt8’   ‘~/tmp/scratch/RtmpKAIYaf’ ‘~/tmp/scratch/RtmpKAOYDV’   ‘~/tmp/scratch/RtmpKFRZDd’ ‘~/tmp/scratch/RtmpL98GTd’   ‘~/tmp/scratch/RtmpM71jOz’ ‘~/tmp/scratch/RtmpMsH0a7’   ‘~/tmp/scratch/RtmpNd6SOZ’ ‘~/tmp/scratch/RtmpO9GE0g’   ‘~/tmp/scratch/RtmpOPqhUe’ ‘~/tmp/scratch/RtmpPCqXtj’   ‘~/tmp/scratch/RtmpPbH6Em’ ‘~/tmp/scratch/RtmpQBmh3s’   ‘~/tmp/scratch/RtmpRIVVXs’ ‘~/tmp/scratch/RtmpSiHI8h’   ‘~/tmp/scratch/RtmpTWHotB’ ‘~/tmp/scratch/RtmpTXUJve’   ‘~/tmp/scratch/RtmpTaelOe’ ‘~/tmp/scratch/RtmpVKdSdE’   ‘~/tmp/scratch/RtmpVfEwJk’ ‘~/tmp/scratch/RtmpVh5O1H’   ‘~/tmp/scratch/RtmpVwWcvt’ ‘~/tmp/scratch/RtmpW6PcFs’   ‘~/tmp/scratch/RtmpWal3zO’ ‘~/tmp/scratch/RtmpYUTRcn’   ‘~/tmp/scratch/RtmpYaqJB0’ ‘~/tmp/scratch/RtmpYu92vz’   ‘~/tmp/scratch/RtmpaaSrCR’ ‘~/tmp/scratch/RtmpafxTkY’   ‘~/tmp/scratch/Rtmpb9nQJP’ ‘~/tmp/scratch/RtmpbfXh3r’   ‘~/tmp/scratch/Rtmpbi55nS’ ‘~/tmp/scratch/Rtmpcl7o4w’   ‘~/tmp/scratch/RtmpdAAYSO’ ‘~/tmp/scratch/RtmpdJ1zom’   ‘~/tmp/scratch/RtmpdVzyQp’ ‘~/tmp/scratch/RtmpdXkxBC’   ‘~/tmp/scratch/Rtmpdp5HKz’ ‘~/tmp/scratch/RtmpeSk9nW’   ‘~/tmp/scratch/RtmpeeUL1U’ ‘~/tmp/scratch/RtmpefDkMu’   ‘~/tmp/scratch/RtmpejLYaT’ ‘~/tmp/scratch/RtmpeqfKia’   ‘~/tmp/scratch/RtmpfAlEbU’ ‘~/tmp/scratch/RtmpfvTY10’   ‘~/tmp/scratch/RtmphLCiLg’ ‘~/tmp/scratch/RtmphPXVni’   ‘~/tmp/scratch/Rtmphcusmr’ ‘~/tmp/scratch/RtmpiU9nY4’   ‘~/tmp/scratch/RtmpiUN7RF’ ‘~/tmp/scratch/RtmpiuUhp2’   ‘~/tmp/scratch/RtmpjJapKE’ ‘~/tmp/scratch/RtmpjO5Sty’   ‘~/tmp/scratch/Rtmpjiy2jd’ ‘~/tmp/scratch/RtmpjlRqkl’   ‘~/tmp/scratch/RtmpjmKm5V’ ‘~/tmp/scratch/RtmpjpELd5’   ‘~/tmp/scratch/RtmpjsAebJ’ ‘~/tmp/scratch/RtmpkgRurl’   ‘~/tmp/scratch/Rtmpkz6wxM’ ‘~/tmp/scratch/Rtmpl32p9X’   ‘~/tmp/scratch/RtmplNn7xg’ ‘~/tmp/scratch/RtmpmStVS7’   ‘~/tmp/scratch/RtmpmVmN7T’ ‘~/tmp/scratch/Rtmpmi9TVE’   ‘~/tmp/scratch/RtmpmiJtdb’ ‘~/tmp/scratch/RtmpmtqBkC’   ‘~/tmp/scratch/RtmpnK0N3E’ ‘~/tmp/scratch/RtmpnVHtg8’   ‘~/tmp/scratch/RtmpoQaO2N’ ‘~/tmp/scratch/RtmpoUt3w7’   ‘~/tmp/scratch/RtmppLhWpX’ ‘~/tmp/scratch/RtmppfvSfa’   ‘~/tmp/scratch/RtmppqU8HJ’ ‘~/tmp/scratch/Rtmpq4nIOp’   ‘~/tmp/scratch/Rtmpr9DFSA’ ‘~/tmp/scratch/RtmprJhzom’   ‘~/tmp/scratch/RtmprKGM0C’ ‘~/tmp/scratch/RtmprNJiSR’   ‘~/tmp/scratch/RtmprcsIGx’ ‘~/tmp/scratch/RtmpsYyNU3’   ‘~/tmp/scratch/RtmpsrYU0Q’ ‘~/tmp/scratch/Rtmpsu4nnV’   ‘~/tmp/scratch/Rtmptw9GCv’ ‘~/tmp/scratch/RtmpuL1CB8’   ‘~/tmp/scratch/Rtmpuamq2N’ ‘~/tmp/scratch/RtmpujWk0x’   ‘~/tmp/scratch/RtmpukwYbm’ ‘~/tmp/scratch/Rtmpv2pKXZ’   ‘~/tmp/scratch/RtmpvKWhDN’ ‘~/tmp/scratch/Rtmpvd1CfO’   ‘~/tmp/scratch/RtmpvdhUTi’ ‘~/tmp/scratch/Rtmpw7bE71’   ‘~/tmp/scratch/RtmpwB5MzB’ ‘~/tmp/scratch/RtmpwBGdiM’   ‘~/tmp/scratch/RtmpwRoHNF’ ‘~/tmp/scratch/RtmpwZ7HZx’   ‘~/tmp/scratch/RtmpxUooce’ ‘~/tmp/scratch/RtmpxlDS7D’   ‘~/tmp/scratch/RtmpyC8KOz’ ‘~/tmp/scratch/RtmpyMNkIh’   ‘~/tmp/scratch/Rtmpz7jTxR’ ‘~/tmp/scratch/xvfb-run.0HymiZ’   ‘~/tmp/scratch/xvfb-run.0I1z0f’ ‘~/tmp/scratch/xvfb-run.0tJIFQ’   ‘~/tmp/scratch/xvfb-run.1y6dHA’ ‘~/tmp/scratch/xvfb-run.2TJ7Ev’   ‘~/tmp/scratch/xvfb-run.3wnnMU’ ‘~/tmp/scratch/xvfb-run.7FXCvW’   ‘~/tmp/scratch/xvfb-run.87gvWr’ ‘~/tmp/scratch/xvfb-run.A2CAto’   ‘~/tmp/scratch/xvfb-run.B2f6Ei’ ‘~/tmp/scratch/xvfb-run.CIQfMC’   ‘~/tmp/scratch/xvfb-run.DKf0mf’ ‘~/tmp/scratch/xvfb-run.EeiIte’   ‘~/tmp/scratch/xvfb-run.Exyx2Z’ ‘~/tmp/scratch/xvfb-run.Ey8OYH’   ‘~/tmp/scratch/xvfb-run.FYVFLR’ ‘~/tmp/scratch/xvfb-run.GepnLu’   ‘~/tmp/scratch/xvfb-run.IPm39d’ ‘~/tmp/scratch/xvfb-run.ISW9xX’   ‘~/tmp/scratch/xvfb-run.Jhs7v4’ ‘~/tmp/scratch/xvfb-run.KDG6Q9’   ‘~/tmp/scratch/xvfb-run.LQI4zV’ ‘~/tmp/scratch/xvfb-run.LqGGCz’   ‘~/tmp/scratch/xvfb-run.McZDhm’ ‘~/tmp/scratch/xvfb-run.Mj7Ep0’   ‘~/tmp/scratch/xvfb-run.MnWTWm’ ‘~/tmp/scratch/xvfb-run.NUIYVx’   ‘~/tmp/scratch/xvfb-run.Qr07ow’ ‘~/tmp/scratch/xvfb-run.QvCxeP’   ‘~/tmp/scratch/xvfb-run.TdYdTS’ ‘~/tmp/scratch/xvfb-run.UFgMfb’   ‘~/tmp/scratch/xvfb-run.WfjCuy’ ‘~/tmp/scratch/xvfb-run.XPiirz’   ‘~/tmp/scratch/xvfb-run.Xh6E9c’ ‘~/tmp/scratch/xvfb-run.YGu9H8’   ‘~/tmp/scratch/xvfb-run.ZInXSR’ ‘~/tmp/scratch/xvfb-run.a0mCl0’   ‘~/tmp/scratch/xvfb-run.eTXrG1’ ‘~/tmp/scratch/xvfb-run.fKiPWt’   ‘~/tmp/scratch/xvfb-run.h9U6kW’ ‘~/tmp/scratch/xvfb-run.jXyg6t’   ‘~/tmp/scratch/xvfb-run.keGYSY’ ‘~/tmp/scratch/xvfb-run.kg6kPK’   ‘~/tmp/scratch/xvfb-run.ltMaSP’ ‘~/tmp/scratch/xvfb-run.mQ7p8H’   ‘~/tmp/scratch/xvfb-run.mwhE2O’ ‘~/tmp/scratch/xvfb-run.o0c06f’   ‘~/tmp/scratch/xvfb-run.p58uFh’ ‘~/tmp/scratch/xvfb-run.rAUey6’   ‘~/tmp/scratch/xvfb-run.rwZnmo’ ‘~/tmp/scratch/xvfb-run.ssGlBW’   ‘~/tmp/scratch/xvfb-run.teXunY’ ‘~/tmp/scratch/xvfb-run.uSknst’   ‘~/tmp/scratch/xvfb-run.umc5KD’ ‘~/tmp/scratch/xvfb-run.vry1iX’   ‘~/tmp/scratch/xvfb-run.wHSgX8’ ‘~/tmp/scratch/xvfb-run.wWGpv5’   ‘~/tmp/scratch/xvfb-run.wbc3qa’ ‘~/tmp/scratch/xvfb-run.wgOsqO’   ‘~/tmp/scratch/xvfb-run.yEFIIV’ ‘~/tmp/scratch/xvfb-run.zwfmax’
• DONE

Status: 2 NOTEs