• using R Under development (unstable) (2022-08-09 r82699)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘factorMerger/DESCRIPTION’ ... OK
• this is package ‘factorMerger’ version ‘0.4.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘factorMerger’ can be installed ... OK
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [21s/33s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/11s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [9s/14s] OK
    Running ‘testthat.R’ [9s/13s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [32s/49s] ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘brca.Rmd’ using rmarkdown
  Welcome to factorMerger 0.4.0!
  
  Loading required package: forcats
  Warning: `arrange_()` was deprecated in dplyr 0.7.0.
  Please use `arrange()` instead.
  See vignette('programming') for more help
  This warning is displayed once every 8 hours.
  Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
  Quitting from lines 51-56 (brca.Rmd)
  Error: processing vignette ‘brca.Rmd’ failed with diagnostics:
  ‘list’ object cannot be coerced to type ‘double’
  --- failed re-building ‘brca.Rmd’
  
  --- re-building ‘factorMerger.Rmd’ using rmarkdown
  
  Attaching package: 'dplyr'
  
  The following objects are masked from 'package:stats':
  
      filter, lag
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  Warning: `select_()` was deprecated in dplyr 0.7.0.
  Please use `select()` instead.
  This warning is displayed once every 8 hours.
  Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: `group_by_()` was deprecated in dplyr 0.7.0.
  Please use `group_by()` instead.
  See vignette('programming') for more help
  This warning is displayed once every 8 hours.
  Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  Warning in data(veteran) : data set 'veteran' not found
  Quitting from lines 213-220 (factorMerger.Rmd)
  Error: processing vignette ‘factorMerger.Rmd’ failed with diagnostics:
  ‘list’ object cannot be coerced to type ‘double’
  --- failed re-building ‘factorMerger.Rmd’
  
  --- re-building ‘pisa2012.Rmd’ using rmarkdown
  Using country as id variables
  Warning: Vectorized input to `element_text()` is not officially supported.
  Results may be unexpected or may change in future versions of ggplot2.
  --- finished re-building ‘pisa2012.Rmd’
  
  SUMMARY: processing the following files failed:
    ‘brca.Rmd’ ‘factorMerger.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted
  
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR