• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 14:41:13 UTC
• checking for file ‘europepmc/DESCRIPTION’ ... OK
• this is package ‘europepmc’ version ‘0.4.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘europepmc’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/10s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [2s/3s] OK   Running ‘testthat.R’ [2s/3s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/4s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp1pyOcL’ ‘~/tmp/scratch/Rtmp1vH91q’   ‘~/tmp/scratch/Rtmp2OGGn6’ ‘~/tmp/scratch/Rtmp2ibewW’   ‘~/tmp/scratch/Rtmp3MIbKx’ ‘~/tmp/scratch/Rtmp4BgNku’   ‘~/tmp/scratch/Rtmp4Ewq8V’ ‘~/tmp/scratch/Rtmp4RAZBb’   ‘~/tmp/scratch/Rtmp4r6ag3’ ‘~/tmp/scratch/Rtmp6LIwme’   ‘~/tmp/scratch/Rtmp6Use31’ ‘~/tmp/scratch/Rtmp7L09a1’   ‘~/tmp/scratch/Rtmp871IpB’ ‘~/tmp/scratch/Rtmp8VFcr2’   ‘~/tmp/scratch/Rtmp8bm8dR’ ‘~/tmp/scratch/Rtmp9AAVAb’   ‘~/tmp/scratch/Rtmp9z1zSi’ ‘~/tmp/scratch/RtmpA726Kn’   ‘~/tmp/scratch/RtmpCOqDu3’ ‘~/tmp/scratch/RtmpCZsFQj’   ‘~/tmp/scratch/RtmpCsd0AC’ ‘~/tmp/scratch/RtmpCtvMHW’   ‘~/tmp/scratch/RtmpCzU8Xl’ ‘~/tmp/scratch/RtmpEUO5K8’   ‘~/tmp/scratch/RtmpEVx26Q’ ‘~/tmp/scratch/RtmpEodRsK’   ‘~/tmp/scratch/RtmpF1pg3e’ ‘~/tmp/scratch/RtmpF8Atnq’   ‘~/tmp/scratch/RtmpFq0h5s’ ‘~/tmp/scratch/RtmpG80HXk’   ‘~/tmp/scratch/RtmpGykR6H’ ‘~/tmp/scratch/RtmpH25RmT’   ‘~/tmp/scratch/RtmpH8cXf5’ ‘~/tmp/scratch/RtmpHOE9Cv’   ‘~/tmp/scratch/RtmpHQTI6P’ ‘~/tmp/scratch/RtmpIUMyLf’   ‘~/tmp/scratch/RtmpIt6b1f’ ‘~/tmp/scratch/RtmpIyxhIK’   ‘~/tmp/scratch/RtmpJL0S6t’ ‘~/tmp/scratch/RtmpJd5gYk’   ‘~/tmp/scratch/RtmpKPPros’ ‘~/tmp/scratch/RtmpLAalMA’   ‘~/tmp/scratch/RtmpLGv5BZ’ ‘~/tmp/scratch/RtmpLpAirv’   ‘~/tmp/scratch/RtmpM9wyYC’ ‘~/tmp/scratch/RtmpMNDiOr’   ‘~/tmp/scratch/RtmpMRaNXC’ ‘~/tmp/scratch/RtmpOmrEIX’   ‘~/tmp/scratch/RtmpOy5Q1Q’ ‘~/tmp/scratch/RtmpPhECHY’   ‘~/tmp/scratch/RtmpQC81kL’ ‘~/tmp/scratch/RtmpQWJfwG’   ‘~/tmp/scratch/RtmpQXKjRY’ ‘~/tmp/scratch/RtmpQgePUr’   ‘~/tmp/scratch/RtmpRucFUX’ ‘~/tmp/scratch/RtmpRvdlsx’   ‘~/tmp/scratch/RtmpSOhS9W’ ‘~/tmp/scratch/RtmpTIPWLC’   ‘~/tmp/scratch/RtmpTKb0Zf’ ‘~/tmp/scratch/RtmpToWWYW’   ‘~/tmp/scratch/RtmpTqNtbf’ ‘~/tmp/scratch/RtmpUcYbe3’   ‘~/tmp/scratch/RtmpUou4lb’ ‘~/tmp/scratch/RtmpVZR3ja’   ‘~/tmp/scratch/RtmpWHaZIA’ ‘~/tmp/scratch/RtmpWO9qrf’   ‘~/tmp/scratch/RtmpWddNEQ’ ‘~/tmp/scratch/RtmpXAVnKA’   ‘~/tmp/scratch/RtmpXJXw5p’ ‘~/tmp/scratch/RtmpXnpGJ9’   ‘~/tmp/scratch/RtmpYPgsmK’ ‘~/tmp/scratch/RtmpYfrUSr’   ‘~/tmp/scratch/RtmpYu9nix’ ‘~/tmp/scratch/RtmpYvWG0a’   ‘~/tmp/scratch/RtmpYy2O0z’ ‘~/tmp/scratch/RtmpYz29QG’   ‘~/tmp/scratch/RtmpZ3xYW3’ ‘~/tmp/scratch/RtmpZPLzB0’   ‘~/tmp/scratch/RtmpZYnrSX’ ‘~/tmp/scratch/RtmpZxxbqS’   ‘~/tmp/scratch/Rtmpa0KgoT’ ‘~/tmp/scratch/RtmpaV8C4L’   ‘~/tmp/scratch/Rtmpau2K7A’ ‘~/tmp/scratch/Rtmpcfc0al’   ‘~/tmp/scratch/Rtmpct8ILu’ ‘~/tmp/scratch/RtmpdSOCrz’   ‘~/tmp/scratch/RtmpdUUPMH’ ‘~/tmp/scratch/RtmpdZvJMJ’   ‘~/tmp/scratch/RtmpdfRUKw’ ‘~/tmp/scratch/RtmpdpjZ1i’   ‘~/tmp/scratch/RtmpeLTxVR’ ‘~/tmp/scratch/RtmpeWuWFi’   ‘~/tmp/scratch/RtmpefnR0V’ ‘~/tmp/scratch/RtmpeiZMSj’   ‘~/tmp/scratch/Rtmpek5Ai6’ ‘~/tmp/scratch/RtmpepJgar’   ‘~/tmp/scratch/Rtmpeu7cCc’ ‘~/tmp/scratch/Rtmpf5HOTD’   ‘~/tmp/scratch/RtmpfWtCXQ’ ‘~/tmp/scratch/RtmpfY2UC9’   ‘~/tmp/scratch/Rtmpg8w586’ ‘~/tmp/scratch/RtmpgUS0Lz’   ‘~/tmp/scratch/Rtmpi3PLGQ’ ‘~/tmp/scratch/RtmpiOGIZJ’   ‘~/tmp/scratch/RtmpizSw40’ ‘~/tmp/scratch/RtmpjwtI0O’   ‘~/tmp/scratch/Rtmpk1aLsq’ ‘~/tmp/scratch/RtmpkEeE2O’   ‘~/tmp/scratch/Rtmpkw4fcn’ ‘~/tmp/scratch/RtmpmE2pin’   ‘~/tmp/scratch/RtmpnJGsuS’ ‘~/tmp/scratch/RtmpnKb6UF’   ‘~/tmp/scratch/RtmpnXwvLy’ ‘~/tmp/scratch/RtmpnuM2ze’   ‘~/tmp/scratch/Rtmpo2nUyr’ ‘~/tmp/scratch/RtmpoVkmIG’   ‘~/tmp/scratch/RtmpoXtqdD’ ‘~/tmp/scratch/RtmpooMGBD’   ‘~/tmp/scratch/RtmpoyUhXV’ ‘~/tmp/scratch/RtmppbGnP6’   ‘~/tmp/scratch/RtmppvonX9’ ‘~/tmp/scratch/RtmpqL09x3’   ‘~/tmp/scratch/Rtmpr92CFd’ ‘~/tmp/scratch/RtmprJSNSR’   ‘~/tmp/scratch/RtmprRWCPp’ ‘~/tmp/scratch/RtmpsCd7Sl’   ‘~/tmp/scratch/Rtmpt6Lq9z’ ‘~/tmp/scratch/RtmptTLGBZ’   ‘~/tmp/scratch/RtmptiLxWA’ ‘~/tmp/scratch/RtmptjUYjr’   ‘~/tmp/scratch/RtmptumHw9’ ‘~/tmp/scratch/Rtmpu3R4dc’   ‘~/tmp/scratch/RtmpuQmOyj’ ‘~/tmp/scratch/RtmpuRr1E0’   ‘~/tmp/scratch/RtmpuiSKjQ’ ‘~/tmp/scratch/RtmpvZu0kb’   ‘~/tmp/scratch/Rtmpwon5x6’ ‘~/tmp/scratch/Rtmpx4nziH’   ‘~/tmp/scratch/RtmpyMXQp4’ ‘~/tmp/scratch/RtmpyRXN1f’   ‘~/tmp/scratch/Rtmpym84Av’ ‘~/tmp/scratch/RtmpzCRTLc’   ‘~/tmp/scratch/RtmpzUvU2c’ ‘~/tmp/scratch/cc6XVdtF.s’   ‘~/tmp/scratch/xvfb-run.2A8Knk’ ‘~/tmp/scratch/xvfb-run.2J3ZdH’   ‘~/tmp/scratch/xvfb-run.2Owi3r’ ‘~/tmp/scratch/xvfb-run.4pclE1’   ‘~/tmp/scratch/xvfb-run.5g8JHX’ ‘~/tmp/scratch/xvfb-run.6isitx’   ‘~/tmp/scratch/xvfb-run.7Ou4ov’ ‘~/tmp/scratch/xvfb-run.87Auk3’   ‘~/tmp/scratch/xvfb-run.9Bqp8r’ ‘~/tmp/scratch/xvfb-run.AVrvrK’   ‘~/tmp/scratch/xvfb-run.CGrjKo’ ‘~/tmp/scratch/xvfb-run.CWSaZC’   ‘~/tmp/scratch/xvfb-run.D6HxQX’ ‘~/tmp/scratch/xvfb-run.DsuG9g’   ‘~/tmp/scratch/xvfb-run.DwhCUc’ ‘~/tmp/scratch/xvfb-run.DxPSrw’   ‘~/tmp/scratch/xvfb-run.IVXxm8’ ‘~/tmp/scratch/xvfb-run.LmyufK’   ‘~/tmp/scratch/xvfb-run.MjtFDq’ ‘~/tmp/scratch/xvfb-run.QN2rsD’   ‘~/tmp/scratch/xvfb-run.RUo4HQ’ ‘~/tmp/scratch/xvfb-run.RjX2RY’   ‘~/tmp/scratch/xvfb-run.Ux5xTz’ ‘~/tmp/scratch/xvfb-run.VeaNOa’   ‘~/tmp/scratch/xvfb-run.Xueyds’ ‘~/tmp/scratch/xvfb-run.arLioh’   ‘~/tmp/scratch/xvfb-run.bI4ZBg’ ‘~/tmp/scratch/xvfb-run.eGzCKH’   ‘~/tmp/scratch/xvfb-run.iVIA8X’ ‘~/tmp/scratch/xvfb-run.jeIa9Q’   ‘~/tmp/scratch/xvfb-run.kYn06I’ ‘~/tmp/scratch/xvfb-run.oWInox’   ‘~/tmp/scratch/xvfb-run.oXprbN’ ‘~/tmp/scratch/xvfb-run.pql59H’   ‘~/tmp/scratch/xvfb-run.q4uqmJ’ ‘~/tmp/scratch/xvfb-run.tgGwAn’   ‘~/tmp/scratch/xvfb-run.uXC5eb’ ‘~/tmp/scratch/xvfb-run.uxyxCF’   ‘~/tmp/scratch/xvfb-run.vCPvN1’ ‘~/tmp/scratch/xvfb-run.vMP51H’   ‘~/tmp/scratch/xvfb-run.vTmAoC’ ‘~/tmp/scratch/xvfb-run.vrQ6pI’   ‘~/tmp/scratch/xvfb-run.y6oMys’ ‘~/tmp/scratch/xvfb-run.yhneaC’
• DONE

Status: 1 NOTE