• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 14:38:17 UTC
• checking for file ‘episomer/DESCRIPTION’ ... OK
• this is package ‘episomer’ version ‘3.0.35’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... INFO Package suggested but not available for checking: ‘taskscheduleR’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘episomer’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/3s] OK
• checking loading without being on the library search path ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [28s/36s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/4s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [10s/21s] OK
• checking PDF version of manual ... [5s/6s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0KTftq’ ‘~/tmp/scratch/Rtmp0lBD8s’   ‘~/tmp/scratch/Rtmp0xrKiJ’ ‘~/tmp/scratch/Rtmp1JvlbY’   ‘~/tmp/scratch/Rtmp1OkGaZ’ ‘~/tmp/scratch/Rtmp2H1SJ5’   ‘~/tmp/scratch/Rtmp2LsEMi’ ‘~/tmp/scratch/Rtmp2WAK4r’   ‘~/tmp/scratch/Rtmp2iSXpr’ ‘~/tmp/scratch/Rtmp2jTs1h’   ‘~/tmp/scratch/Rtmp2n4W3Z’ ‘~/tmp/scratch/Rtmp2reQZN’   ‘~/tmp/scratch/Rtmp37rPI6’ ‘~/tmp/scratch/Rtmp3MJFRs’   ‘~/tmp/scratch/Rtmp3VagF3’ ‘~/tmp/scratch/Rtmp3sBrLW’   ‘~/tmp/scratch/Rtmp4NmyUz’ ‘~/tmp/scratch/Rtmp4Nv152’   ‘~/tmp/scratch/Rtmp56SrIl’ ‘~/tmp/scratch/Rtmp5pKuUN’   ‘~/tmp/scratch/Rtmp6A3PPI’ ‘~/tmp/scratch/Rtmp6CO5LR’   ‘~/tmp/scratch/Rtmp6fAR0z’ ‘~/tmp/scratch/Rtmp79iYPF’   ‘~/tmp/scratch/Rtmp7CIxMC’ ‘~/tmp/scratch/Rtmp9uiG1u’   ‘~/tmp/scratch/RtmpABlVWI’ ‘~/tmp/scratch/RtmpAG8xJL’   ‘~/tmp/scratch/RtmpAze3Oz’ ‘~/tmp/scratch/RtmpB4pZIU’   ‘~/tmp/scratch/RtmpBC4IvK’ ‘~/tmp/scratch/RtmpBwvrkK’   ‘~/tmp/scratch/RtmpCBsEvB’ ‘~/tmp/scratch/RtmpCWtYYh’   ‘~/tmp/scratch/RtmpCmI5Hs’ ‘~/tmp/scratch/RtmpCwsbvm’   ‘~/tmp/scratch/RtmpDfTC6s’ ‘~/tmp/scratch/RtmpDhHhDR’   ‘~/tmp/scratch/RtmpE1Ni4S’ ‘~/tmp/scratch/RtmpEsXYIt’   ‘~/tmp/scratch/RtmpFqc4SL’ ‘~/tmp/scratch/RtmpJ4u384’   ‘~/tmp/scratch/RtmpJO6nR7’ ‘~/tmp/scratch/RtmpJR4F5u’   ‘~/tmp/scratch/RtmpKS1GTP’ ‘~/tmp/scratch/RtmpKTUReP’   ‘~/tmp/scratch/RtmpKqRFDT’ ‘~/tmp/scratch/RtmpL3TJpl’   ‘~/tmp/scratch/RtmpLSkdOV’ ‘~/tmp/scratch/RtmpLnjTJD’   ‘~/tmp/scratch/RtmpMZLNwQ’ ‘~/tmp/scratch/RtmpMdHAKr’   ‘~/tmp/scratch/RtmpMvixTR’ ‘~/tmp/scratch/RtmpNdftTh’   ‘~/tmp/scratch/RtmpOCz40N’ ‘~/tmp/scratch/RtmpOuEdUQ’   ‘~/tmp/scratch/RtmpOzpGiW’ ‘~/tmp/scratch/RtmpPUlvec’   ‘~/tmp/scratch/RtmpPexO3l’ ‘~/tmp/scratch/RtmpQmHGAZ’   ‘~/tmp/scratch/RtmpRDmKjo’ ‘~/tmp/scratch/RtmpRtVhno’   ‘~/tmp/scratch/RtmpRwwvk2’ ‘~/tmp/scratch/RtmpS8xxyF’   ‘~/tmp/scratch/RtmpSFtAYC’ ‘~/tmp/scratch/RtmpSUHJ7S’   ‘~/tmp/scratch/RtmpSZq7ow’ ‘~/tmp/scratch/RtmpTPex7J’   ‘~/tmp/scratch/RtmpUEn7Zb’ ‘~/tmp/scratch/RtmpVXcfTa’   ‘~/tmp/scratch/RtmpVgVWdE’ ‘~/tmp/scratch/RtmpWLap8j’   ‘~/tmp/scratch/RtmpWiMwOw’ ‘~/tmp/scratch/RtmpWx77jY’   ‘~/tmp/scratch/RtmpX6XCeU’ ‘~/tmp/scratch/RtmpXTUGMX’   ‘~/tmp/scratch/RtmpYW0piA’ ‘~/tmp/scratch/RtmpYbdQLt’   ‘~/tmp/scratch/RtmpYipm1j’ ‘~/tmp/scratch/RtmpYwy9Qc’   ‘~/tmp/scratch/RtmpZ8uLmC’ ‘~/tmp/scratch/RtmpZhKtcX’   ‘~/tmp/scratch/RtmpaLEClg’ ‘~/tmp/scratch/RtmpaUHjoy’   ‘~/tmp/scratch/RtmpaaRKV6’ ‘~/tmp/scratch/RtmpaigHVT’   ‘~/tmp/scratch/RtmpbKy75l’ ‘~/tmp/scratch/RtmpbQ6YLi’   ‘~/tmp/scratch/RtmpbTqfHZ’ ‘~/tmp/scratch/RtmpbxuWXb’   ‘~/tmp/scratch/RtmpbzDK7J’ ‘~/tmp/scratch/RtmpcXmUiG’   ‘~/tmp/scratch/RtmpcmUQyP’ ‘~/tmp/scratch/RtmpcvdQVp’   ‘~/tmp/scratch/RtmpdQ3pkE’ ‘~/tmp/scratch/Rtmpdd8X4c’   ‘~/tmp/scratch/RtmpeJvM0n’ ‘~/tmp/scratch/Rtmpf62wSl’   ‘~/tmp/scratch/RtmpfLwGyF’ ‘~/tmp/scratch/RtmpfVuQQT’   ‘~/tmp/scratch/Rtmpgg17xU’ ‘~/tmp/scratch/RtmphD8nYa’   ‘~/tmp/scratch/RtmpiQgddE’ ‘~/tmp/scratch/RtmpiWOWgX’   ‘~/tmp/scratch/Rtmpic6aap’ ‘~/tmp/scratch/Rtmpj0aNGR’   ‘~/tmp/scratch/Rtmpj0vtgF’ ‘~/tmp/scratch/RtmpjpwZ3r’   ‘~/tmp/scratch/RtmpjsLF2Q’ ‘~/tmp/scratch/Rtmpk3d2Ds’   ‘~/tmp/scratch/RtmplHdGIn’ ‘~/tmp/scratch/RtmplQq6Ht’   ‘~/tmp/scratch/RtmplrXIgk’ ‘~/tmp/scratch/RtmpmHJl7q’   ‘~/tmp/scratch/RtmpmYkPOu’ ‘~/tmp/scratch/RtmpmcPAD9’   ‘~/tmp/scratch/Rtmpn0OshM’ ‘~/tmp/scratch/RtmpnEwhYH’   ‘~/tmp/scratch/RtmpoIkgtC’ ‘~/tmp/scratch/Rtmpp5tF1K’   ‘~/tmp/scratch/RtmppMwEQw’ ‘~/tmp/scratch/RtmppQLJ0t’   ‘~/tmp/scratch/Rtmpq9ZvAS’ ‘~/tmp/scratch/RtmpqraS3i’   ‘~/tmp/scratch/RtmpqsW5SI’ ‘~/tmp/scratch/Rtmpr5exKJ’   ‘~/tmp/scratch/RtmprVQWfv’ ‘~/tmp/scratch/RtmprasCBp’   ‘~/tmp/scratch/RtmprcSvnU’ ‘~/tmp/scratch/Rtmprfz0Zz’   ‘~/tmp/scratch/RtmpruH2q6’ ‘~/tmp/scratch/Rtmps7ggRx’   ‘~/tmp/scratch/RtmpsMrF2P’ ‘~/tmp/scratch/RtmpsOzJzZ’   ‘~/tmp/scratch/Rtmpt1nJcC’ ‘~/tmp/scratch/RtmptLW4uI’   ‘~/tmp/scratch/RtmptU9htR’ ‘~/tmp/scratch/RtmptWoP24’   ‘~/tmp/scratch/RtmpttqTWe’ ‘~/tmp/scratch/RtmpuCLsOv’   ‘~/tmp/scratch/RtmpursUUD’ ‘~/tmp/scratch/Rtmpvhaj17’   ‘~/tmp/scratch/RtmpvhhoNz’ ‘~/tmp/scratch/RtmpvoehOO’   ‘~/tmp/scratch/RtmpyAqYre’ ‘~/tmp/scratch/RtmpyTqjhK’   ‘~/tmp/scratch/RtmpzWiMXo’ ‘~/tmp/scratch/RtmpzwCMvK’   ‘~/tmp/scratch/xvfb-run.0Qgt12’ ‘~/tmp/scratch/xvfb-run.0TaSWQ’   ‘~/tmp/scratch/xvfb-run.602P8J’ ‘~/tmp/scratch/xvfb-run.6Xo4RC’   ‘~/tmp/scratch/xvfb-run.8uDbFz’ ‘~/tmp/scratch/xvfb-run.A1tC1W’   ‘~/tmp/scratch/xvfb-run.AR2fkx’ ‘~/tmp/scratch/xvfb-run.AoBalG’   ‘~/tmp/scratch/xvfb-run.Axy88S’ ‘~/tmp/scratch/xvfb-run.C9GbaP’   ‘~/tmp/scratch/xvfb-run.DOXxzZ’ ‘~/tmp/scratch/xvfb-run.Dk5aIR’   ‘~/tmp/scratch/xvfb-run.ExQASP’ ‘~/tmp/scratch/xvfb-run.FYCPWA’   ‘~/tmp/scratch/xvfb-run.GKMadG’ ‘~/tmp/scratch/xvfb-run.HVsYFH’   ‘~/tmp/scratch/xvfb-run.HlY8k1’ ‘~/tmp/scratch/xvfb-run.I1DtDU’   ‘~/tmp/scratch/xvfb-run.J0xhtZ’ ‘~/tmp/scratch/xvfb-run.JVPPJw’   ‘~/tmp/scratch/xvfb-run.JYfBYm’ ‘~/tmp/scratch/xvfb-run.Jl4iUK’   ‘~/tmp/scratch/xvfb-run.JsqkrW’ ‘~/tmp/scratch/xvfb-run.KxnfzH’   ‘~/tmp/scratch/xvfb-run.L6bTyi’ ‘~/tmp/scratch/xvfb-run.LcuBLy’   ‘~/tmp/scratch/xvfb-run.Lmqn0P’ ‘~/tmp/scratch/xvfb-run.Lruawf’   ‘~/tmp/scratch/xvfb-run.M07NB7’ ‘~/tmp/scratch/xvfb-run.M9Ba6o’   ‘~/tmp/scratch/xvfb-run.NJf0sQ’ ‘~/tmp/scratch/xvfb-run.QVHx5h’   ‘~/tmp/scratch/xvfb-run.RoLwEU’ ‘~/tmp/scratch/xvfb-run.Sw5n3i’   ‘~/tmp/scratch/xvfb-run.Vfumfx’ ‘~/tmp/scratch/xvfb-run.YEPjOt’   ‘~/tmp/scratch/xvfb-run.YTQgT0’ ‘~/tmp/scratch/xvfb-run.Yugfa6’   ‘~/tmp/scratch/xvfb-run.Z2AjjP’ ‘~/tmp/scratch/xvfb-run.ZSR27u’   ‘~/tmp/scratch/xvfb-run.Zg1Zi0’ ‘~/tmp/scratch/xvfb-run.a6cl8n’   ‘~/tmp/scratch/xvfb-run.aO6ZOz’ ‘~/tmp/scratch/xvfb-run.cZp6Qf’   ‘~/tmp/scratch/xvfb-run.dJh5EB’ ‘~/tmp/scratch/xvfb-run.dMx5sI’   ‘~/tmp/scratch/xvfb-run.dRxSsB’ ‘~/tmp/scratch/xvfb-run.dV8Zpx’   ‘~/tmp/scratch/xvfb-run.dlKg8t’ ‘~/tmp/scratch/xvfb-run.dmyWTZ’   ‘~/tmp/scratch/xvfb-run.dsKMiW’ ‘~/tmp/scratch/xvfb-run.dv78qw’   ‘~/tmp/scratch/xvfb-run.fEWXuD’ ‘~/tmp/scratch/xvfb-run.g0LS2w’   ‘~/tmp/scratch/xvfb-run.g2Qc1x’ ‘~/tmp/scratch/xvfb-run.gZu9aS’   ‘~/tmp/scratch/xvfb-run.ga8llM’ ‘~/tmp/scratch/xvfb-run.kZXx7d’   ‘~/tmp/scratch/xvfb-run.pUDE2s’ ‘~/tmp/scratch/xvfb-run.tQUFUR’   ‘~/tmp/scratch/xvfb-run.u5rkwh’ ‘~/tmp/scratch/xvfb-run.uLEgz2’   ‘~/tmp/scratch/xvfb-run.ybCith’ ‘~/tmp/scratch/xvfb-run.z0HIQA’   ‘~/tmp/scratch/xvfb-run.zY9fCr’
• DONE

Status: 1 NOTE