- using R Under development (unstable) (2026-07-22 r90289)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-2) 16.1.0
GNU Fortran (Debian 16.1.0-2) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-23 14:32:28 UTC
- checking for file ‘emstreeR/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘emstreeR’ version ‘3.1.3’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘emstreeR’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
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- checking loading without being on the library search path ... [0s/0s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s/9s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [0s/0s] ERROR
Running examples in ‘emstreeR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ComputeMST
> ### Title: Euclidean Minimum Spanning Tree
> ### Aliases: ComputeMST
>
> ### ** Examples
>
>
> ## artifical data
> set.seed(1984)
> n <- 15
> c1 <- data.frame(x = rnorm(n, -0.2, sd = 0.2), y = rnorm(n, -2, sd = 0.2))
> c2 <- data.frame(x = rnorm(n, -1.1, sd = 0.15), y = rnorm(n, -2, sd = 0.3))
> d <- rbind(c1, c2)
> d <- as.data.frame(d)
>
> ## MST:
> out <- ComputeMST(d)
[0;32m[INFO ] [0mBuilding tree.
[0;32m[INFO ] [0mCalculating minimum spanning tree.
[0;32m[INFO ] [0m19 edges found so far.
[0;32m[INFO ] [0m44 cumulative base cases.
[0;32m[INFO ] [0m267 cumulative node combinations scored.
[0;32m[INFO ] [0m26 edges found so far.
[0;32m[INFO ] [0m71 cumulative base cases.
[0;32m[INFO ] [0m527 cumulative node combinations scored.
[0;32m[INFO ] [0m29 edges found so far.
[0;32m[INFO ] [0m90 cumulative base cases.
[0;32m[INFO ] [0m746 cumulative node combinations scored.
[0;32m[INFO ] [0mTotal spanning tree length: 4.01111
Error in mlpack::emst(data_aux, verbose = verbose)$output :
$ operator is invalid for atomic vectors
Calls: ComputeMST
Execution halted
- checking PDF version of manual ... [5s/6s] OK
- checking HTML version of manual ... [0s/0s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR