• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 14:35:20 UTC
• checking for file ‘eglhmm/DESCRIPTION’ ... OK
• this is package ‘eglhmm’ version ‘0.1-3’
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘eglhmm’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• used Fortran compiler: ‘GNU Fortran (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/15s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking usage of KIND in Fortran files ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [33s/40s] OK Examples with CPU (user + system) or elapsed time > 5s                 user system elapsed crossval 6.054 0.013 7.780 reglhmm 4.829 0.008 5.255 fitted.eglhmm 4.596 0.008 5.696 reorder.eglhmm 4.546 0.000 5.185 anova.eglhmm 3.742 0.064 5.036
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/6s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0qf1PG’ ‘~/tmp/scratch/Rtmp1cZiGU’   ‘~/tmp/scratch/Rtmp1dPQto’ ‘~/tmp/scratch/Rtmp2FCOtt’   ‘~/tmp/scratch/Rtmp2gaxcN’ ‘~/tmp/scratch/Rtmp387JI9’   ‘~/tmp/scratch/Rtmp3JOxId’ ‘~/tmp/scratch/Rtmp3XUpU1’   ‘~/tmp/scratch/Rtmp4WMoEW’ ‘~/tmp/scratch/Rtmp5DiJj5’   ‘~/tmp/scratch/Rtmp5SKFJH’ ‘~/tmp/scratch/Rtmp682A3N’   ‘~/tmp/scratch/Rtmp6klvmH’ ‘~/tmp/scratch/Rtmp6uSfW9’   ‘~/tmp/scratch/Rtmp7a1j2m’ ‘~/tmp/scratch/Rtmp8JLDec’   ‘~/tmp/scratch/Rtmp8ncECv’ ‘~/tmp/scratch/Rtmp8tSVHv’   ‘~/tmp/scratch/Rtmp8xiuLF’ ‘~/tmp/scratch/Rtmp9DZ0NX’   ‘~/tmp/scratch/Rtmp9OifUH’ ‘~/tmp/scratch/RtmpAIwFBe’   ‘~/tmp/scratch/RtmpAJIoJL’ ‘~/tmp/scratch/RtmpAxnUbM’   ‘~/tmp/scratch/RtmpBHYJxg’ ‘~/tmp/scratch/RtmpBNWQYX’   ‘~/tmp/scratch/RtmpBc794c’ ‘~/tmp/scratch/RtmpBwG5Jp’   ‘~/tmp/scratch/RtmpCDMqj4’ ‘~/tmp/scratch/RtmpCMLcNd’   ‘~/tmp/scratch/RtmpD4A8Mw’ ‘~/tmp/scratch/RtmpDja9ZR’   ‘~/tmp/scratch/RtmpDrZbDh’ ‘~/tmp/scratch/RtmpEqFv53’   ‘~/tmp/scratch/RtmpEwzKmV’ ‘~/tmp/scratch/RtmpFZteLm’   ‘~/tmp/scratch/RtmpFab0bu’ ‘~/tmp/scratch/RtmpG9A3tV’   ‘~/tmp/scratch/RtmpGOCik1’ ‘~/tmp/scratch/RtmpGQELDG’   ‘~/tmp/scratch/RtmpHQ9ek6’ ‘~/tmp/scratch/RtmpHsz2s4’   ‘~/tmp/scratch/RtmpIHFsS2’ ‘~/tmp/scratch/RtmpIZCdeL’   ‘~/tmp/scratch/RtmpJkeyYZ’ ‘~/tmp/scratch/RtmpK3b2Cv’   ‘~/tmp/scratch/RtmpKQy0A6’ ‘~/tmp/scratch/RtmpKlSqA4’   ‘~/tmp/scratch/RtmpLOxhR2’ ‘~/tmp/scratch/RtmpLW3eNO’   ‘~/tmp/scratch/RtmpLfwCpj’ ‘~/tmp/scratch/RtmpLq5nCz’   ‘~/tmp/scratch/RtmpLurntZ’ ‘~/tmp/scratch/RtmpM8YUAd’   ‘~/tmp/scratch/RtmpMGiLd4’ ‘~/tmp/scratch/RtmpMnO3LJ’   ‘~/tmp/scratch/RtmpMs74ul’ ‘~/tmp/scratch/RtmpN59DM8’   ‘~/tmp/scratch/RtmpNBmtdb’ ‘~/tmp/scratch/RtmpNc3PFh’   ‘~/tmp/scratch/RtmpO1kmoQ’ ‘~/tmp/scratch/RtmpO60M00’   ‘~/tmp/scratch/RtmpO7hGBA’ ‘~/tmp/scratch/RtmpOZFDVD’   ‘~/tmp/scratch/RtmpP3Oiu5’ ‘~/tmp/scratch/RtmpPKOUYl’   ‘~/tmp/scratch/RtmpQCzVfK’ ‘~/tmp/scratch/RtmpQPIaAT’   ‘~/tmp/scratch/RtmpRFnYeX’ ‘~/tmp/scratch/RtmpRnSHwJ’   ‘~/tmp/scratch/RtmpRrmyMP’ ‘~/tmp/scratch/RtmpS9601n’   ‘~/tmp/scratch/RtmpSCTbsT’ ‘~/tmp/scratch/RtmpStu4EP’   ‘~/tmp/scratch/RtmpTHOG7b’ ‘~/tmp/scratch/RtmpTe3Fdz’   ‘~/tmp/scratch/RtmpUHV64L’ ‘~/tmp/scratch/RtmpVEA2DQ’   ‘~/tmp/scratch/RtmpW0Opbu’ ‘~/tmp/scratch/RtmpW8QfSU’   ‘~/tmp/scratch/RtmpWGJuU8’ ‘~/tmp/scratch/RtmpWHuXrM’   ‘~/tmp/scratch/RtmpXPvyZy’ ‘~/tmp/scratch/RtmpYHw6yt’   ‘~/tmp/scratch/RtmpYtbzpV’ ‘~/tmp/scratch/RtmpZQ4OFp’   ‘~/tmp/scratch/RtmpZeC3XA’ ‘~/tmp/scratch/RtmpZn5Qpb’   ‘~/tmp/scratch/RtmpZuFmxX’ ‘~/tmp/scratch/RtmpaGlO8N’   ‘~/tmp/scratch/RtmpbFN2VP’ ‘~/tmp/scratch/Rtmpbi6H8m’   ‘~/tmp/scratch/RtmpbreeO1’ ‘~/tmp/scratch/RtmpcKPJrK’   ‘~/tmp/scratch/RtmpcNcxVK’ ‘~/tmp/scratch/RtmpcmFpQe’   ‘~/tmp/scratch/RtmpdIJBX3’ ‘~/tmp/scratch/RtmpdKCCJe’   ‘~/tmp/scratch/Rtmpe439s7’ ‘~/tmp/scratch/RtmpeH2zlQ’   ‘~/tmp/scratch/RtmpeeYvO9’ ‘~/tmp/scratch/Rtmpfm6Z2u’   ‘~/tmp/scratch/Rtmph8uz4z’ ‘~/tmp/scratch/RtmphWFzI4’   ‘~/tmp/scratch/RtmphlbnsT’ ‘~/tmp/scratch/Rtmphs9ft4’   ‘~/tmp/scratch/Rtmpi1ncRc’ ‘~/tmp/scratch/RtmpiMKk3J’   ‘~/tmp/scratch/Rtmpisvk8b’ ‘~/tmp/scratch/Rtmpizuz5T’   ‘~/tmp/scratch/Rtmpj2sWYt’ ‘~/tmp/scratch/RtmpkCF66u’   ‘~/tmp/scratch/RtmpkSbOnV’ ‘~/tmp/scratch/RtmpkTy9IZ’   ‘~/tmp/scratch/RtmplGyu42’ ‘~/tmp/scratch/RtmpmC3WSG’   ‘~/tmp/scratch/Rtmpmb9yWY’ ‘~/tmp/scratch/RtmpmwrHj9’   ‘~/tmp/scratch/RtmpnIXwKa’ ‘~/tmp/scratch/RtmpnS0JB5’   ‘~/tmp/scratch/RtmpnXnFR0’ ‘~/tmp/scratch/RtmpoXqpNX’   ‘~/tmp/scratch/RtmporBrt6’ ‘~/tmp/scratch/Rtmpow2wa7’   ‘~/tmp/scratch/RtmppWzrtf’ ‘~/tmp/scratch/RtmppZ54qF’   ‘~/tmp/scratch/RtmpphKvgA’ ‘~/tmp/scratch/Rtmppp3AeH’   ‘~/tmp/scratch/RtmpqC2ZHo’ ‘~/tmp/scratch/RtmpqiJprz’   ‘~/tmp/scratch/RtmpqvTZn4’ ‘~/tmp/scratch/RtmpqxGsza’   ‘~/tmp/scratch/RtmpqyxFIX’ ‘~/tmp/scratch/Rtmpr1VRow’   ‘~/tmp/scratch/RtmprgDphP’ ‘~/tmp/scratch/RtmprtZYtw’   ‘~/tmp/scratch/Rtmps6ddxa’ ‘~/tmp/scratch/Rtmpt3nwDg’   ‘~/tmp/scratch/RtmptCTJGj’ ‘~/tmp/scratch/RtmptJjK0H’   ‘~/tmp/scratch/RtmptackOu’ ‘~/tmp/scratch/Rtmptgk6us’   ‘~/tmp/scratch/RtmpuE6DcD’ ‘~/tmp/scratch/Rtmpv0rflR’   ‘~/tmp/scratch/RtmpvGYGvN’ ‘~/tmp/scratch/RtmpvOOCyA’   ‘~/tmp/scratch/RtmpvfqXwX’ ‘~/tmp/scratch/RtmpvoMEGD’   ‘~/tmp/scratch/Rtmpw0MF88’ ‘~/tmp/scratch/RtmpwSTtQc’   ‘~/tmp/scratch/Rtmpz8Q1mh’ ‘~/tmp/scratch/cccvVoJA.s’   ‘~/tmp/scratch/xvfb-run.18Gf38’ ‘~/tmp/scratch/xvfb-run.1Cj779’   ‘~/tmp/scratch/xvfb-run.4ZDrPa’ ‘~/tmp/scratch/xvfb-run.4w6oSk’   ‘~/tmp/scratch/xvfb-run.574Ybc’ ‘~/tmp/scratch/xvfb-run.5s4TrU’   ‘~/tmp/scratch/xvfb-run.7KCVXC’ ‘~/tmp/scratch/xvfb-run.8wRpvS’   ‘~/tmp/scratch/xvfb-run.9Y40ph’ ‘~/tmp/scratch/xvfb-run.ArWjjZ’   ‘~/tmp/scratch/xvfb-run.B5mPFt’ ‘~/tmp/scratch/xvfb-run.DdYRjP’   ‘~/tmp/scratch/xvfb-run.DxsOPn’ ‘~/tmp/scratch/xvfb-run.E3A3E9’   ‘~/tmp/scratch/xvfb-run.GKm5Cq’ ‘~/tmp/scratch/xvfb-run.GL6Cuc’   ‘~/tmp/scratch/xvfb-run.H5iQBB’ ‘~/tmp/scratch/xvfb-run.Htvx61’   ‘~/tmp/scratch/xvfb-run.IdjITS’ ‘~/tmp/scratch/xvfb-run.Ki5CVr’   ‘~/tmp/scratch/xvfb-run.KwL3OA’ ‘~/tmp/scratch/xvfb-run.NyszdF’   ‘~/tmp/scratch/xvfb-run.OGp0NH’ ‘~/tmp/scratch/xvfb-run.OkQCr8’   ‘~/tmp/scratch/xvfb-run.OrlaXc’ ‘~/tmp/scratch/xvfb-run.PZ8sbX’   ‘~/tmp/scratch/xvfb-run.PdlLmY’ ‘~/tmp/scratch/xvfb-run.QBtDY9’   ‘~/tmp/scratch/xvfb-run.RCOn0o’ ‘~/tmp/scratch/xvfb-run.RbTQyv’   ‘~/tmp/scratch/xvfb-run.SYsBbE’ ‘~/tmp/scratch/xvfb-run.SZJWSp’   ‘~/tmp/scratch/xvfb-run.Shc3OM’ ‘~/tmp/scratch/xvfb-run.TSI6HS’   ‘~/tmp/scratch/xvfb-run.To7FgO’ ‘~/tmp/scratch/xvfb-run.UQ7rJj’   ‘~/tmp/scratch/xvfb-run.UugRfq’ ‘~/tmp/scratch/xvfb-run.VgrFxT’   ‘~/tmp/scratch/xvfb-run.WMwKNi’ ‘~/tmp/scratch/xvfb-run.WV7E0Q’   ‘~/tmp/scratch/xvfb-run.XIQU1P’ ‘~/tmp/scratch/xvfb-run.XsVSrs’   ‘~/tmp/scratch/xvfb-run.Y0DPtG’ ‘~/tmp/scratch/xvfb-run.ZPNF9f’   ‘~/tmp/scratch/xvfb-run.ZqJgUH’ ‘~/tmp/scratch/xvfb-run.cMuHMD’   ‘~/tmp/scratch/xvfb-run.crM725’ ‘~/tmp/scratch/xvfb-run.dOA2GQ’   ‘~/tmp/scratch/xvfb-run.e5ZTmf’ ‘~/tmp/scratch/xvfb-run.et3J8Y’   ‘~/tmp/scratch/xvfb-run.hJtnSa’ ‘~/tmp/scratch/xvfb-run.jAxpmO’   ‘~/tmp/scratch/xvfb-run.m92q4w’ ‘~/tmp/scratch/xvfb-run.maegz3’   ‘~/tmp/scratch/xvfb-run.nuFwLF’ ‘~/tmp/scratch/xvfb-run.oY8niN’   ‘~/tmp/scratch/xvfb-run.ouJHiz’ ‘~/tmp/scratch/xvfb-run.pbv14p’   ‘~/tmp/scratch/xvfb-run.ppraYJ’ ‘~/tmp/scratch/xvfb-run.qFzONX’   ‘~/tmp/scratch/xvfb-run.qH5Yo9’ ‘~/tmp/scratch/xvfb-run.qh94Jf’   ‘~/tmp/scratch/xvfb-run.qt8nTI’ ‘~/tmp/scratch/xvfb-run.sHhlBY’   ‘~/tmp/scratch/xvfb-run.uceNGs’ ‘~/tmp/scratch/xvfb-run.xwM4B2’   ‘~/tmp/scratch/xvfb-run.yvaetl’ ‘~/tmp/scratch/xvfb-run.zHVMJD’   ‘~/tmp/scratch/xvfb-run.zmJ0Tg’
• DONE

Status: 1 NOTE