• using R Under development (unstable) (2026-08-01 r90334)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-02 14:13:20 UTC
• checking for file ‘dTBM/DESCRIPTION’ ... OK
• this is package ‘dTBM’ version ‘3.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘dTBM’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [11s/14s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) angle_iteration.Rd:23: Lost braces; missing escapes or markup?     23 | \code{z} {a list of vectors recording the estimated clustering assignment}        | ^ checkRd: (-1) angle_iteration.Rd:25: Lost braces; missing escapes or markup?     25 | \code{s_deg} {logic variable, if "TRUE", degenerate estimated core tensor/matrix occurs during the iteration; if "FALSE", otherwise}        | ^ checkRd: (-1) dtbm.Rd:23: Lost braces     23 | \code{z} {a list of vectors recording the refined clustering assignment with initialization \code{z0}}        | ^ checkRd: (-1) dtbm.Rd:25: Lost braces; missing escapes or markup?     25 | \code{s_deg} {logic variable, if "TRUE", degenerate estimated core tensor/matrix occurs during the iteration; if "FALSE", otherwise}        | ^ checkRd: (-1) dtbm.Rd:27: Lost braces; missing escapes or markup?     27 | \code{z0} { a list of vectors recording the initial clustering assignment }        | ^ checkRd: (-1) dtbm.Rd:29: Lost braces; missing escapes or markup?     29 | \code{s0} { a list of vectors recording the index of degenerate entities with random clustering assignment in initialization}        | ^ checkRd: (-1) select_r.Rd:19: Lost braces; missing escapes or markup?     19 | \code{r} {vector, the cluster number among the candidates with minimal BIC value}        | ^ checkRd: (-1) select_r.Rd:21: Lost braces; missing escapes or markup?     21 | \code{bic} {vector, the BIC value for each candidiate}        | ^ checkRd: (-1) sim_dTBM.Rd:56: Lost braces     56 | \code{Y} {array ( if \code{imat = FALSE} )/matrix ( if \code{imat = TRUE} ), simulated tensor/matrix observations with dimension \code{p} }        | ^ checkRd: (-1) sim_dTBM.Rd:58: Lost braces     58 | \code{X} {array ( if \code{imat = FALSE} )/matrix ( if \code{imat = TRUE} ), mean tensor/matrix of the observation, i.e., the expectation of \code{Y}}        | ^ checkRd: (-1) sim_dTBM.Rd:60: Lost braces     60 | \code{S} {array ( if \code{imat = FALSE} )/matrix ( if \code{imat = TRUE} ), core tensor/matrix recording the block effects with dimension \code{r}}        | ^ checkRd: (-1) sim_dTBM.Rd:62: Lost braces; missing escapes or markup?     62 | \code{theta} {a list of vectors, degree heterogeneity on each mode}        | ^ checkRd: (-1) sim_dTBM.Rd:64: Lost braces; missing escapes or markup?     64 | \code{z} {a list of vectors, clustering assignment on each mode}        | ^ checkRd: (-1) wkmeans.Rd:19: Lost braces; missing escapes or markup?     19 | \code{z0} { a list of vectors recording the estimated clustering assignment }        | ^ checkRd: (-1) wkmeans.Rd:21: Lost braces; missing escapes or markup?     21 | \code{s0} { a list of vectors recording the index of degenerate entities with random clustering assignment}        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [4s/6s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp1kPra6’ ‘~/tmp/scratch/Rtmp2E71iM’   ‘~/tmp/scratch/Rtmp2f7NIi’ ‘~/tmp/scratch/Rtmp3blSbe’   ‘~/tmp/scratch/Rtmp3k6nqD’ ‘~/tmp/scratch/Rtmp43ooyn’   ‘~/tmp/scratch/Rtmp47k73F’ ‘~/tmp/scratch/Rtmp4HHw5C’   ‘~/tmp/scratch/Rtmp4uoTFc’ ‘~/tmp/scratch/Rtmp5aCaaB’   ‘~/tmp/scratch/Rtmp64lzg3’ ‘~/tmp/scratch/Rtmp6Ar53J’   ‘~/tmp/scratch/Rtmp7Q8lG1’ ‘~/tmp/scratch/Rtmp80oxDB’   ‘~/tmp/scratch/Rtmp8DWt3j’ ‘~/tmp/scratch/Rtmp8QtYtx’   ‘~/tmp/scratch/Rtmp8ulvbr’ ‘~/tmp/scratch/Rtmp9h2Yfq’   ‘~/tmp/scratch/RtmpAKFRVV’ ‘~/tmp/scratch/RtmpAdXVLH’   ‘~/tmp/scratch/RtmpD1KRZe’ ‘~/tmp/scratch/RtmpDW2qgz’   ‘~/tmp/scratch/RtmpDixmgy’ ‘~/tmp/scratch/RtmpEmm6CN’   ‘~/tmp/scratch/RtmpGYSbRA’ ‘~/tmp/scratch/RtmpGxnMzD’   ‘~/tmp/scratch/RtmpHYI9AR’ ‘~/tmp/scratch/RtmpI4BmX2’   ‘~/tmp/scratch/RtmpIDpCYm’ ‘~/tmp/scratch/RtmpIKmEU2’   ‘~/tmp/scratch/RtmpJ7TgKZ’ ‘~/tmp/scratch/RtmpJMNWjo’   ‘~/tmp/scratch/RtmpJP22Fk’ ‘~/tmp/scratch/RtmpJXdJPq’   ‘~/tmp/scratch/RtmpJw7fPz’ ‘~/tmp/scratch/RtmpK91USW’   ‘~/tmp/scratch/RtmpKILKG6’ ‘~/tmp/scratch/RtmpKbiMH2’   ‘~/tmp/scratch/RtmpKuUYph’ ‘~/tmp/scratch/RtmpLRBS0S’   ‘~/tmp/scratch/RtmpLYKIaS’ ‘~/tmp/scratch/RtmpLf4in3’   ‘~/tmp/scratch/RtmpNDxEuJ’ ‘~/tmp/scratch/RtmpNWGjCA’   ‘~/tmp/scratch/RtmpNgJaxu’ ‘~/tmp/scratch/RtmpNyNd0B’   ‘~/tmp/scratch/RtmpO5LOYM’ ‘~/tmp/scratch/RtmpOfov1k’   ‘~/tmp/scratch/RtmpQIPREy’ ‘~/tmp/scratch/RtmpQYZqUW’   ‘~/tmp/scratch/RtmpSEnjWL’ ‘~/tmp/scratch/RtmpShs0iM’   ‘~/tmp/scratch/RtmpUIYRwi’ ‘~/tmp/scratch/RtmpUQZLnz’   ‘~/tmp/scratch/RtmpUp0oVD’ ‘~/tmp/scratch/RtmpX0dncW’   ‘~/tmp/scratch/RtmpX9bKFz’ ‘~/tmp/scratch/RtmpXJRXPs’   ‘~/tmp/scratch/RtmpXXmIfs’ ‘~/tmp/scratch/RtmpY8ORaU’   ‘~/tmp/scratch/RtmpYzu8X9’ ‘~/tmp/scratch/RtmpZAdKol’   ‘~/tmp/scratch/RtmpZVySG0’ ‘~/tmp/scratch/RtmpZvOVtE’   ‘~/tmp/scratch/RtmpayEKO2’ ‘~/tmp/scratch/RtmpbEnLyy’   ‘~/tmp/scratch/RtmpbUqoS3’ ‘~/tmp/scratch/Rtmpbeo38d’   ‘~/tmp/scratch/RtmpblU7er’ ‘~/tmp/scratch/RtmpbmzYxA’   ‘~/tmp/scratch/RtmpcQr9Fd’ ‘~/tmp/scratch/Rtmpcc1Qqa’   ‘~/tmp/scratch/RtmpcdR317’ ‘~/tmp/scratch/RtmpcdoV24’   ‘~/tmp/scratch/Rtmpd0MfaK’ ‘~/tmp/scratch/Rtmpd1IPC9’   ‘~/tmp/scratch/RtmpdAuM6A’ ‘~/tmp/scratch/Rtmpdme4nK’   ‘~/tmp/scratch/Rtmpdt6MNr’ ‘~/tmp/scratch/Rtmpe9Q2MO’   ‘~/tmp/scratch/Rtmpe9kbV2’ ‘~/tmp/scratch/Rtmpf7knjY’   ‘~/tmp/scratch/RtmpfKeoUZ’ ‘~/tmp/scratch/RtmpfY8hVJ’   ‘~/tmp/scratch/RtmpgRfAui’ ‘~/tmp/scratch/Rtmpgn3Bfo’   ‘~/tmp/scratch/RtmphBxn05’ ‘~/tmp/scratch/RtmphOXp73’   ‘~/tmp/scratch/Rtmphu4qIt’ ‘~/tmp/scratch/RtmpiDDHz7’   ‘~/tmp/scratch/RtmpiHVVrT’ ‘~/tmp/scratch/RtmpieyeGQ’   ‘~/tmp/scratch/Rtmpk5CZxj’ ‘~/tmp/scratch/Rtmpk7IM1G’   ‘~/tmp/scratch/RtmpkfyWZ4’ ‘~/tmp/scratch/Rtmpllhxht’   ‘~/tmp/scratch/RtmplyapN2’ ‘~/tmp/scratch/RtmpmPF9H6’   ‘~/tmp/scratch/RtmpmkixxA’ ‘~/tmp/scratch/RtmpoySNDN’   ‘~/tmp/scratch/RtmppMHziu’ ‘~/tmp/scratch/Rtmpq3W56Y’   ‘~/tmp/scratch/RtmpqGNDQ3’ ‘~/tmp/scratch/RtmpqrPJyo’   ‘~/tmp/scratch/RtmpqrY6PO’ ‘~/tmp/scratch/RtmprBV8xp’   ‘~/tmp/scratch/RtmprlrpFT’ ‘~/tmp/scratch/RtmprxOBl9’   ‘~/tmp/scratch/RtmpsglBVn’ ‘~/tmp/scratch/RtmptSBfDz’   ‘~/tmp/scratch/RtmpuchOgh’ ‘~/tmp/scratch/RtmpunPSm5’   ‘~/tmp/scratch/Rtmpv3GfNE’ ‘~/tmp/scratch/RtmpvDRs5o’   ‘~/tmp/scratch/RtmpvsOdmY’ ‘~/tmp/scratch/RtmpvvNhu5’   ‘~/tmp/scratch/RtmpwJdTLi’ ‘~/tmp/scratch/RtmpxSZWt2’   ‘~/tmp/scratch/RtmpxZpkVG’ ‘~/tmp/scratch/RtmpxdYJHK’   ‘~/tmp/scratch/RtmpyCzvFm’ ‘~/tmp/scratch/RtmpyUVPK8’   ‘~/tmp/scratch/RtmpzznrZE’ ‘~/tmp/scratch/xvfb-run.0YT6gm’   ‘~/tmp/scratch/xvfb-run.1Iup4U’ ‘~/tmp/scratch/xvfb-run.6V3jy6’   ‘~/tmp/scratch/xvfb-run.6xTbsV’ ‘~/tmp/scratch/xvfb-run.7V2Qpo’   ‘~/tmp/scratch/xvfb-run.9Miynl’ ‘~/tmp/scratch/xvfb-run.A427Rk’   ‘~/tmp/scratch/xvfb-run.CB4RaW’ ‘~/tmp/scratch/xvfb-run.DwsmwI’   ‘~/tmp/scratch/xvfb-run.GcVxgI’ ‘~/tmp/scratch/xvfb-run.HNLTbc’   ‘~/tmp/scratch/xvfb-run.HjjVEz’ ‘~/tmp/scratch/xvfb-run.I7X9W0’   ‘~/tmp/scratch/xvfb-run.KaQ112’ ‘~/tmp/scratch/xvfb-run.KhhrXx’   ‘~/tmp/scratch/xvfb-run.L9fZij’ ‘~/tmp/scratch/xvfb-run.LCT3Ia’   ‘~/tmp/scratch/xvfb-run.LjcVtp’ ‘~/tmp/scratch/xvfb-run.NJ9dg7’   ‘~/tmp/scratch/xvfb-run.NrKj7t’ ‘~/tmp/scratch/xvfb-run.O4BUtC’   ‘~/tmp/scratch/xvfb-run.OBVjHN’ ‘~/tmp/scratch/xvfb-run.PNipsC’   ‘~/tmp/scratch/xvfb-run.QxO7r6’ ‘~/tmp/scratch/xvfb-run.TWik8U’   ‘~/tmp/scratch/xvfb-run.UnD6dD’ ‘~/tmp/scratch/xvfb-run.VEh9gP’   ‘~/tmp/scratch/xvfb-run.XnT233’ ‘~/tmp/scratch/xvfb-run.YRlJ6r’   ‘~/tmp/scratch/xvfb-run.Z3J6nq’ ‘~/tmp/scratch/xvfb-run.bgmPPL’   ‘~/tmp/scratch/xvfb-run.bwQylU’ ‘~/tmp/scratch/xvfb-run.cPQJW9’   ‘~/tmp/scratch/xvfb-run.gOjxRn’ ‘~/tmp/scratch/xvfb-run.hftjOj’   ‘~/tmp/scratch/xvfb-run.id5Mdj’ ‘~/tmp/scratch/xvfb-run.k94G7z’   ‘~/tmp/scratch/xvfb-run.kckVHB’ ‘~/tmp/scratch/xvfb-run.nREurt’   ‘~/tmp/scratch/xvfb-run.uTiHHy’ ‘~/tmp/scratch/xvfb-run.v5Zrhf’   ‘~/tmp/scratch/xvfb-run.vzJ3RN’ ‘~/tmp/scratch/xvfb-run.wbkGA3’   ‘~/tmp/scratch/xvfb-run.x8XpeU’ ‘~/tmp/scratch/xvfb-run.z5NAp7’   ‘~/tmp/scratch/xvfb-run.zqLzrG’
• DONE

Status: 2 NOTEs