• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 14:14:32 UTC
• checking for file ‘cytofan/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘cytofan’ version ‘0.1.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cytofan’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/11s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [5s/5s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [14s/16s] OK
• checking PDF version of manual ... [3s/4s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0HJIz8’ ‘~/tmp/scratch/Rtmp0I5uNF’   ‘~/tmp/scratch/Rtmp0hQByj’ ‘~/tmp/scratch/Rtmp2rswXh’   ‘~/tmp/scratch/Rtmp3IKFBe’ ‘~/tmp/scratch/Rtmp3QxvXQ’   ‘~/tmp/scratch/Rtmp69Cza8’ ‘~/tmp/scratch/Rtmp7HYe4W’   ‘~/tmp/scratch/Rtmp7Ia44v’ ‘~/tmp/scratch/Rtmp7Q5Jao’   ‘~/tmp/scratch/Rtmp81OoQI’ ‘~/tmp/scratch/Rtmp81ZqXF’   ‘~/tmp/scratch/Rtmp9i09r4’ ‘~/tmp/scratch/Rtmp9xyaae’   ‘~/tmp/scratch/RtmpABj2LL’ ‘~/tmp/scratch/RtmpAKMjON’   ‘~/tmp/scratch/RtmpBhRxId’ ‘~/tmp/scratch/RtmpC5DNMr’   ‘~/tmp/scratch/RtmpCFQCq6’ ‘~/tmp/scratch/RtmpCZYGX6’   ‘~/tmp/scratch/RtmpD6nbWE’ ‘~/tmp/scratch/RtmpD8m4QR’   ‘~/tmp/scratch/RtmpDpemAP’ ‘~/tmp/scratch/RtmpDvBoPS’   ‘~/tmp/scratch/RtmpFrCiiD’ ‘~/tmp/scratch/RtmpG92mVw’   ‘~/tmp/scratch/RtmpH8I5un’ ‘~/tmp/scratch/RtmpHFC9h4’   ‘~/tmp/scratch/RtmpHaaals’ ‘~/tmp/scratch/RtmpI4AyEi’   ‘~/tmp/scratch/RtmpINf4Lq’ ‘~/tmp/scratch/RtmpKUFixK’   ‘~/tmp/scratch/RtmpLHA1rh’ ‘~/tmp/scratch/RtmpLM6CFQ’   ‘~/tmp/scratch/RtmpMJU6iS’ ‘~/tmp/scratch/RtmpMeuYLn’   ‘~/tmp/scratch/RtmpOAAYrL’ ‘~/tmp/scratch/RtmpOLZQAo’   ‘~/tmp/scratch/RtmpPPY455’ ‘~/tmp/scratch/RtmpPkVlBJ’   ‘~/tmp/scratch/RtmpPohnng’ ‘~/tmp/scratch/RtmpQMiADi’   ‘~/tmp/scratch/RtmpQhTBzV’ ‘~/tmp/scratch/RtmpQzACs4’   ‘~/tmp/scratch/RtmpRGMdfc’ ‘~/tmp/scratch/RtmpRGri0r’   ‘~/tmp/scratch/RtmpRoN4Sq’ ‘~/tmp/scratch/RtmpSDzSf1’   ‘~/tmp/scratch/RtmpSFQQOd’ ‘~/tmp/scratch/RtmpSqCj9s’   ‘~/tmp/scratch/RtmpSvTIPh’ ‘~/tmp/scratch/RtmpTJhA4x’   ‘~/tmp/scratch/RtmpTR2aKm’ ‘~/tmp/scratch/RtmpTfC1zU’   ‘~/tmp/scratch/RtmpTnfj4F’ ‘~/tmp/scratch/RtmpUFrTrs’   ‘~/tmp/scratch/RtmpUbUkp8’ ‘~/tmp/scratch/RtmpUpgdJw’   ‘~/tmp/scratch/RtmpVmv7u6’ ‘~/tmp/scratch/RtmpX51swS’   ‘~/tmp/scratch/RtmpXyPHcP’ ‘~/tmp/scratch/RtmpZIVjah’   ‘~/tmp/scratch/RtmpaC7wFZ’ ‘~/tmp/scratch/RtmpaLFIz9’   ‘~/tmp/scratch/RtmpagSFwb’ ‘~/tmp/scratch/RtmpamMSRU’   ‘~/tmp/scratch/Rtmparouf1’ ‘~/tmp/scratch/RtmpbeT1cx’   ‘~/tmp/scratch/RtmpbgCYGW’ ‘~/tmp/scratch/Rtmpc2etvM’   ‘~/tmp/scratch/Rtmpcpi0Uc’ ‘~/tmp/scratch/RtmpdX72J3’   ‘~/tmp/scratch/RtmpdkpYRh’ ‘~/tmp/scratch/RtmpdwTCjU’   ‘~/tmp/scratch/Rtmpe45d5p’ ‘~/tmp/scratch/RtmpeOP4S4’   ‘~/tmp/scratch/RtmpeyAy1j’ ‘~/tmp/scratch/RtmpfCCYJ4’   ‘~/tmp/scratch/Rtmpfp8ciZ’ ‘~/tmp/scratch/RtmpfsgnYF’   ‘~/tmp/scratch/Rtmpg7x5RB’ ‘~/tmp/scratch/RtmpgHbxJC’   ‘~/tmp/scratch/Rtmpgsvgy5’ ‘~/tmp/scratch/RtmphmDgZy’   ‘~/tmp/scratch/Rtmpi5fIHQ’ ‘~/tmp/scratch/RtmpixU3K6’   ‘~/tmp/scratch/RtmpjLKhGD’ ‘~/tmp/scratch/RtmpjPl055’   ‘~/tmp/scratch/RtmpkNmBee’ ‘~/tmp/scratch/RtmpkU4fiV’   ‘~/tmp/scratch/RtmpkYWIou’ ‘~/tmp/scratch/RtmplagQz9’   ‘~/tmp/scratch/Rtmpm75U6V’ ‘~/tmp/scratch/RtmpmUOnLU’   ‘~/tmp/scratch/Rtmpn6Ivga’ ‘~/tmp/scratch/Rtmpn6es9l’   ‘~/tmp/scratch/RtmpnNHraG’ ‘~/tmp/scratch/RtmpnZBNcW’   ‘~/tmp/scratch/RtmpnvPn5H’ ‘~/tmp/scratch/RtmpobaZkq’   ‘~/tmp/scratch/RtmppFVj1i’ ‘~/tmp/scratch/RtmppkPBI0’   ‘~/tmp/scratch/RtmppnKtUn’ ‘~/tmp/scratch/RtmpqiB0wL’   ‘~/tmp/scratch/RtmprhnVl7’ ‘~/tmp/scratch/Rtmps7SQaV’   ‘~/tmp/scratch/RtmpsBXpcr’ ‘~/tmp/scratch/RtmpspK8Lu’   ‘~/tmp/scratch/RtmptSDoxc’ ‘~/tmp/scratch/RtmptYBcYq’   ‘~/tmp/scratch/RtmpuUz2uy’ ‘~/tmp/scratch/RtmpuYUROh’   ‘~/tmp/scratch/RtmpvP7ulg’ ‘~/tmp/scratch/RtmpvgmVhQ’   ‘~/tmp/scratch/Rtmpw76fJf’ ‘~/tmp/scratch/RtmpwnE6WF’   ‘~/tmp/scratch/RtmpwqqMTQ’ ‘~/tmp/scratch/Rtmpx47vxC’   ‘~/tmp/scratch/Rtmpx5faLk’ ‘~/tmp/scratch/RtmpxIpE7x’   ‘~/tmp/scratch/Rtmpy1VF94’ ‘~/tmp/scratch/RtmpyI2D7x’   ‘~/tmp/scratch/RtmpyIfCl0’ ‘~/tmp/scratch/RtmpyXC1LL’   ‘~/tmp/scratch/RtmpywL09b’ ‘~/tmp/scratch/RtmpzYHuEa’   ‘~/tmp/scratch/RtmpzmKkmw’ ‘~/tmp/scratch/ccI2Vqme.s’   ‘~/tmp/scratch/quarto-sessionc261f6f25eb43fc2’   ‘~/tmp/scratch/xvfb-run.0IykWw’ ‘~/tmp/scratch/xvfb-run.0XwUhh’   ‘~/tmp/scratch/xvfb-run.1XJCRN’ ‘~/tmp/scratch/xvfb-run.47DFd1’   ‘~/tmp/scratch/xvfb-run.4dvdDX’ ‘~/tmp/scratch/xvfb-run.60jWic’   ‘~/tmp/scratch/xvfb-run.64Fxn2’ ‘~/tmp/scratch/xvfb-run.7WiCWo’   ‘~/tmp/scratch/xvfb-run.9CUNhP’ ‘~/tmp/scratch/xvfb-run.DXIArV’   ‘~/tmp/scratch/xvfb-run.EoPwit’ ‘~/tmp/scratch/xvfb-run.G4DeQy’   ‘~/tmp/scratch/xvfb-run.K7cPUT’ ‘~/tmp/scratch/xvfb-run.KBe9tu’   ‘~/tmp/scratch/xvfb-run.MGO8Dh’ ‘~/tmp/scratch/xvfb-run.MTu4Zk’   ‘~/tmp/scratch/xvfb-run.Puf1Rv’ ‘~/tmp/scratch/xvfb-run.QdU9hG’   ‘~/tmp/scratch/xvfb-run.SiUkrv’ ‘~/tmp/scratch/xvfb-run.UqpAhs’   ‘~/tmp/scratch/xvfb-run.V6YQB0’ ‘~/tmp/scratch/xvfb-run.V9t6IW’   ‘~/tmp/scratch/xvfb-run.WL0fHz’ ‘~/tmp/scratch/xvfb-run.ZjXPTV’   ‘~/tmp/scratch/xvfb-run.aFC2NG’ ‘~/tmp/scratch/xvfb-run.aM5y2O’   ‘~/tmp/scratch/xvfb-run.aoD847’ ‘~/tmp/scratch/xvfb-run.cDyB3R’   ‘~/tmp/scratch/xvfb-run.dP4KLF’ ‘~/tmp/scratch/xvfb-run.dy3nVh’   ‘~/tmp/scratch/xvfb-run.hzeq55’ ‘~/tmp/scratch/xvfb-run.iFcB4i’   ‘~/tmp/scratch/xvfb-run.kuCZ6D’ ‘~/tmp/scratch/xvfb-run.nD5G22’   ‘~/tmp/scratch/xvfb-run.oR3Eul’ ‘~/tmp/scratch/xvfb-run.tppLws’   ‘~/tmp/scratch/xvfb-run.twdyeN’ ‘~/tmp/scratch/xvfb-run.u4QWQl’   ‘~/tmp/scratch/xvfb-run.vJrvWk’ ‘~/tmp/scratch/xvfb-run.xP9boI’   ‘~/tmp/scratch/xvfb-run.xs6luT’ ‘~/tmp/scratch/xvfb-run.y3VYNF’   ‘~/tmp/scratch/xvfb-run.yyoqdE’ ‘~/tmp/scratch/xvfb-run.zyyQ6c’
• DONE

Status: 1 NOTE