- using R Under development (unstable) (2026-09-21 r90579)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.2.0-1) 16.2.0
GNU Fortran (Debian 16.2.0-1) 16.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-09-22 14:26:48 UTC
- checking for file ‘cthist/DESCRIPTION’ ... OK
- this is package ‘cthist’ version ‘2.1.12’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘cthist’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s/6s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [4s/20s] ERROR
Running ‘testthat.R’ [4s/19s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cthist)
>
> test_check("cthist")
NCT ID caused a warning: NCT00942747
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00942747?history=true': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_dates-6.R
NCT ID caused a warning: NCT02329873
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02329873?history=true': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_download-8.R
Version caused a warning: NCT05827978 version 3
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT05827978/history/3': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_locations-12.R
Version caused a warning: NCT00942747 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00942747/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version-6.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_central_contacts-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_criteria-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_enrol-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_enroltype-12.R
NCT ID caused a warning: NCT00942747
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00942747?history=true': HTTP status was '403 Forbidden'
Error downloading version: NCT00942747 version -1
Here's the original error message:
Error in dates$version_number: $ operator is invalid for atomic vectors
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_lead_sponsor-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_max_age-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_min_age-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_om_data-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_orgstudyid-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_ostatus-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_overall_contacts-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_pcdate-12.R
Version caused a warning: NCT00098137 version 0
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00098137/history/0': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_pcdate_none-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_pcdate_precision-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_pcdate_type-12.R
Version caused a warning: NCT04315480 version 2
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT04315480/history/2': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_references-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_responsible_party-12.R
Version caused a warning: NCT05168917 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT05168917/history/1': HTTP status was '403 Forbidden'
Version caused a warning: NCT05168917 version 3
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT05168917/history/3': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_results_posted-14.R
Version caused a warning: NCT00942747 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00942747/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_secondaryids-16.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_sex-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_startdate-12.R
Version caused a warning: NCT00003636 version 0
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT00003636/history/0': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_startdate_none-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_startdate_precision-12.R
Version caused a warning: NCT02110043 version 1
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02110043/history/1': HTTP status was '403 Forbidden'
Saving _problems/test-clinicaltrials_gov_version_volunteers-12.R
NCT ID caused a warning: NCT02586649
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT02586649?history=true': HTTP status was '403 Forbidden'
Here's the original error message:
Error in UseMethod("pull"): no applicable method for 'pull' applied to an object of class "character"
Saving _problems/test-extract_publications-7.R
NCT ID caused a warning: NCT04338971
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): cannot open URL 'https://clinicaltrials.gov/api/int/studies/NCT04338971?history=true': HTTP status was '403 Forbidden'
Saving _problems/test-overall_status_lengths-4.R
[ FAIL 30 | WARN 0 | SKIP 0 | PASS 1 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-clinicaltrials_gov_dates.R:3:5'): ClinicalTrials.gov version dates download correctly ──
Error in `result$version_date`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(...) at test-clinicaltrials_gov_dates.R:3:5
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_download.R:6:5'): ClinicalTrials.gov history entries mass-download correctly ──
Error in `UseMethod("pull")`: no applicable method for 'pull' applied to an object of class "character"
Backtrace:
▆
1. ├─cthist::clinicaltrials_gov_download(...) at test-clinicaltrials_gov_download.R:6:5
2. │ └─clinicaltrials_gov_dates(nctid, FALSE) %>% ...
3. └─dplyr::pull(., "version_date")
── Error ('test-clinicaltrials_gov_locations.R:9:9'): ClinicalTrials.gov location data downloads correctly ──
Error in `version$locations`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_locations.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$locations)
── Failure ('test-clinicaltrials_gov_version.R:3:5'): ClinicalTrials.gov version downloads correctly ──
Expected `length(result) == 25 || result == "Error"` to equal TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test-clinicaltrials_gov_version_central_contacts.R:9:9'): ClinicalTrials.gov contacts downloads correctly ──
Error in `version$central_contacts`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_central_contacts.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$central_contacts)
── Error ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ──
Error in `version$criteria`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$criteria, "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g.\nprevious major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>") at test-clinicaltrials_gov_version_criteria.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_enrol.R:9:9'): ClinicalTrials.gov enrolment downloads correctly ──
Error in `version$enrol`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$enrol, 22) at test-clinicaltrials_gov_version_enrol.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_enroltype.R:9:9'): ClinicalTrials.gov enrolment downloads correctly ──
Error in `version$enroltype`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$enroltype, "ESTIMATED") at test-clinicaltrials_gov_version_enroltype.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_lead_sponsor.R:9:9'): ClinicalTrials.gov contacts downloads correctly ──
Error in `version$lead_sponsor`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_lead_sponsor.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$lead_sponsor)
── Error ('test-clinicaltrials_gov_version_max_age.R:9:9'): ClinicalTrials.gov maximum age downloads correctly ──
Error in `version$max_age`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$max_age, "90 Years") at test-clinicaltrials_gov_version_max_age.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_min_age.R:9:9'): ClinicalTrials.gov minimum age downloads correctly ──
Error in `version$min_age`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$min_age, "50 Years") at test-clinicaltrials_gov_version_min_age.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_om_data.R:9:9'): ClinicalTrials.gov outcome measures downloads correctly ──
Error in `version$outcomes`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_om_data.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$outcomes)
── Error ('test-clinicaltrials_gov_version_orgstudyid.R:9:9'): ClinicalTrials.gov org study ID downloads correctly ──
Error in `version$orgstudyid`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$orgstudyid, "LOCATO-MCI-tDCS") at test-clinicaltrials_gov_version_orgstudyid.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_ostatus.R:9:9'): ClinicalTrials.gov overall status downloads correctly ──
Error in `version$ostatus`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$ostatus, "RECRUITING") at test-clinicaltrials_gov_version_ostatus.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_overall_contacts.R:9:9'): ClinicalTrials.gov contacts downloads correctly ──
Error in `version$overall_contacts`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_overall_contacts.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$overall_contacts)
── Error ('test-clinicaltrials_gov_version_pcdate.R:9:9'): ClinicalTrials.gov primary completion date downloads correctly ──
Error in `version$pcdate`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$pcdate, "2015-08-01") at test-clinicaltrials_gov_version_pcdate.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_pcdate_none.R:9:9'): ClinicalTrials.gov empty primary completion date ──
Error in `version$pcdate`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(is.na(version$pcdate), TRUE) at test-clinicaltrials_gov_version_pcdate_none.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_pcdate_precision.R:9:9'): ClinicalTrials.gov primary completion date precision downloads correctly ──
Error in `version$pcdate_precision`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$pcdate_precision, "month") at test-clinicaltrials_gov_version_pcdate_precision.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_pcdate_type.R:9:9'): ClinicalTrials.gov primary completion date type downloads correctly ──
Error in `version$pcdate_type`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$pcdate_type, "ESTIMATED") at test-clinicaltrials_gov_version_pcdate_type.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_references.R:9:9'): ClinicalTrials.gov references downloads correctly ──
Error in `version$references`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_references.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$references)
── Error ('test-clinicaltrials_gov_version_responsible_party.R:9:9'): ClinicalTrials.gov contacts downloads correctly ──
Error in `version$responsible_party`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_responsible_party.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jsonlite::fromJSON(version$responsible_party)
── Error ('test-clinicaltrials_gov_version_results_posted.R:10:9'): ClinicalTrials.gov results posted downloads correctly ──
Error in `version_false$results_posted`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(...) at test-clinicaltrials_gov_version_results_posted.R:10:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_secondaryids.R:9:9'): ClinicalTrials.gov org study ID downloads correctly ──
Error in `version$secondaryids`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-clinicaltrials_gov_version_secondaryids.R:9:9
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─tibble::tibble(jsonlite::fromJSON(version$secondaryids))
5. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)
6. │ └─rlang::eval_tidy(xs[[j]], mask)
7. └─jsonlite::fromJSON(version$secondaryids)
── Error ('test-clinicaltrials_gov_version_sex.R:9:9'): ClinicalTrials.gov sex downloads correctly ──
Error in `version$sex`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$sex, "ALL") at test-clinicaltrials_gov_version_sex.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_startdate.R:9:9'): ClinicalTrials.gov start date downloads correctly ──
Error in `version$startdate`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$startdate, "2014-03-01") at test-clinicaltrials_gov_version_startdate.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_startdate_none.R:9:9'): ClinicalTrials.gov start date downloads correctly ──
Error in `version$startdate`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(is.na(version$startdate), TRUE) at test-clinicaltrials_gov_version_startdate_none.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_startdate_precision.R:9:9'): ClinicalTrials.gov start date precision downloads correctly ──
Error in `version$startdate_precision`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$startdate_precision, "month") at test-clinicaltrials_gov_version_startdate_precision.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-clinicaltrials_gov_version_volunteers.R:9:9'): ClinicalTrials.gov 'accepts healthy volunteers' downloads correctly ──
Error in `version$accepts_healthy_volunteers`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(version$accepts_healthy_volunteers, FALSE) at test-clinicaltrials_gov_version_volunteers.R:9:9
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-extract_publications.R:4:5'): Publications extracted correctly ──
Error in `pmid$pmid`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(pmid$pmid[1], "10569435") at test-extract_publications.R:4:5
2. └─testthat::quasi_label(enquo(object), label)
3. └─rlang::eval_bare(expr, quo_get_env(quo))
── Error ('test-overall_status_lengths.R:2:3'): Overall status lengths parse correctly ──
Error in `UseMethod("pull")`: no applicable method for 'pull' applied to an object of class "character"
Backtrace:
▆
1. ├─cthist::clinicaltrials_gov_download("NCT04338971", quiet = TRUE) at test-overall_status_lengths.R:2:3
2. │ └─clinicaltrials_gov_dates(nctid, FALSE) %>% ...
3. └─dplyr::pull(., "version_date")
[ FAIL 30 | WARN 0 | SKIP 0 | PASS 1 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [4s/5s] OK
- checking HTML version of manual ... [0s/0s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR