- using R Under development (unstable) (2026-08-02 r90338)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-08-03 14:20:40 UTC
- checking for file ‘covidcast/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘covidcast’ version ‘0.5.3’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘covidcast’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking whether startup messages can be suppressed ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [8s/11s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [21s/26s] ERROR
Running ‘testthat.R’ [21s/26s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(covidcast)
We encourage COVIDcast API users to register on our mailing list:
https://lists.andrew.cmu.edu/mailman/listinfo/delphi-covidcast-api
We'll send announcements about new data sources, package updates,
server maintenance, and new features.
>
> test_check("covidcast")
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Fetched day 2020-01-01 to 2020-01-01: num_entries = 2
Saving _problems/test-covidcast-89.R
Fetched day 2020-01-01 to 2020-01-01: num_entries = 1
Fetched day 2020-01-01 to 2020-01-05: num_entries = 5
Fetched day 2020-10-30 to 2020-10-31: num_entries = 2
Fetched day 2020-10-30 to 2020-10-31: num_entries = 2
Fetched day 2020-10-01 to 2020-10-03: num_entries = 3
Fetched day 2020-10-04 to 2020-10-06: num_entries = 3
[ FAIL 1 | WARN 13 | SKIP 7 | PASS 59 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-plot.R:11:1', 'test-plot.R:38:1', 'test-plot.R:54:1',
'test-plot.R:91:1', 'test-plot.R:102:1', 'test-plot.R:113:1',
'test-plot.R:133:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-covidcast.R:87:5'): covidcast_signal warns when requested geo_values are unavailable ──
Expected `suppressMessages(...)` to run silently.
Actual noise: warnings.
[ FAIL 1 | WARN 13 | SKIP 7 | PASS 59 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [7s/9s] OK
- checking PDF version of manual ... [4s/6s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp2KphdS’ ‘~/tmp/scratch/Rtmp2WDjhT’
‘~/tmp/scratch/Rtmp2Z7LTp’ ‘~/tmp/scratch/Rtmp2jBPQG’
‘~/tmp/scratch/Rtmp3DeEPO’ ‘~/tmp/scratch/Rtmp3PC9Be’
‘~/tmp/scratch/Rtmp3VtKMV’ ‘~/tmp/scratch/Rtmp40OJFN’
‘~/tmp/scratch/Rtmp65n0yd’ ‘~/tmp/scratch/Rtmp6ebPLl’
‘~/tmp/scratch/Rtmp70B2Gi’ ‘~/tmp/scratch/Rtmp7A6jvy’
‘~/tmp/scratch/Rtmp7EFc2J’ ‘~/tmp/scratch/Rtmp7nKAzU’
‘~/tmp/scratch/Rtmp86ubFl’ ‘~/tmp/scratch/Rtmp8LARK2’
‘~/tmp/scratch/Rtmp92O19X’ ‘~/tmp/scratch/Rtmp93kYoM’
‘~/tmp/scratch/Rtmp9CeVBI’ ‘~/tmp/scratch/Rtmp9Vbbzf’
‘~/tmp/scratch/Rtmp9eL0tT’ ‘~/tmp/scratch/RtmpAEmWsf’
‘~/tmp/scratch/RtmpAKVv6R’ ‘~/tmp/scratch/RtmpAhm8Qs’
‘~/tmp/scratch/RtmpApIwAT’ ‘~/tmp/scratch/RtmpBA4SRe’
‘~/tmp/scratch/RtmpBKGwdc’ ‘~/tmp/scratch/RtmpBU7Rju’
‘~/tmp/scratch/RtmpBWEyRU’ ‘~/tmp/scratch/RtmpBravpV’
‘~/tmp/scratch/RtmpC63w1Z’ ‘~/tmp/scratch/RtmpCEwkzW’
‘~/tmp/scratch/RtmpCRs0F0’ ‘~/tmp/scratch/RtmpD4YIh0’
‘~/tmp/scratch/RtmpDixXaD’ ‘~/tmp/scratch/RtmpESyO2f’
‘~/tmp/scratch/RtmpG33gYD’ ‘~/tmp/scratch/RtmpGrSA0D’
‘~/tmp/scratch/RtmpH28Mfl’ ‘~/tmp/scratch/RtmpH47Htt’
‘~/tmp/scratch/RtmpHOB9zS’ ‘~/tmp/scratch/RtmpHpvQ5Q’
‘~/tmp/scratch/RtmpIEiwCN’ ‘~/tmp/scratch/RtmpIf72hf’
‘~/tmp/scratch/RtmpIouUZ9’ ‘~/tmp/scratch/RtmpIpUBQS’
‘~/tmp/scratch/RtmpJHC4LH’ ‘~/tmp/scratch/RtmpJKNShi’
‘~/tmp/scratch/RtmpKFBJcf’ ‘~/tmp/scratch/RtmpKd4swN’
‘~/tmp/scratch/RtmpKqvK4t’ ‘~/tmp/scratch/RtmpL31nLu’
‘~/tmp/scratch/RtmpL7MmRp’ ‘~/tmp/scratch/RtmpLD3ayF’
‘~/tmp/scratch/RtmpLPhXhq’ ‘~/tmp/scratch/RtmpLR64Vd’
‘~/tmp/scratch/RtmpLRyXEr’ ‘~/tmp/scratch/RtmpM56upg’
‘~/tmp/scratch/RtmpMcxT0C’ ‘~/tmp/scratch/RtmpNHzRYN’
‘~/tmp/scratch/RtmpNTteOL’ ‘~/tmp/scratch/RtmpNqvEOI’
‘~/tmp/scratch/RtmpOb6Ok6’ ‘~/tmp/scratch/RtmpOkppGd’
‘~/tmp/scratch/RtmpOoqQFG’ ‘~/tmp/scratch/RtmpP06uEF’
‘~/tmp/scratch/RtmpP4hK6C’ ‘~/tmp/scratch/RtmpQAnVcd’
‘~/tmp/scratch/RtmpQQTLgC’ ‘~/tmp/scratch/RtmpRMg5j8’
‘~/tmp/scratch/RtmpRbUYZe’ ‘~/tmp/scratch/RtmpRdkbN6’
‘~/tmp/scratch/RtmpSAxTQL’ ‘~/tmp/scratch/RtmpT5jtUT’
‘~/tmp/scratch/RtmpU5IwDR’ ‘~/tmp/scratch/RtmpUnA0u1’
‘~/tmp/scratch/RtmpV3IoIW’ ‘~/tmp/scratch/RtmpVIkqzQ’
‘~/tmp/scratch/RtmpVecR3Q’ ‘~/tmp/scratch/RtmpVxOw9d’
‘~/tmp/scratch/RtmpWPG9tX’ ‘~/tmp/scratch/RtmpXIa5F7’
‘~/tmp/scratch/RtmpXQN1NG’ ‘~/tmp/scratch/RtmpXYGqDa’
‘~/tmp/scratch/RtmpXhICi7’ ‘~/tmp/scratch/RtmpZ9jHX2’
‘~/tmp/scratch/RtmpZzxUC1’ ‘~/tmp/scratch/RtmpaEBrRy’
‘~/tmp/scratch/RtmpaigVLy’ ‘~/tmp/scratch/Rtmpb37NuV’
‘~/tmp/scratch/RtmpcTuToY’ ‘~/tmp/scratch/RtmpcfQYxk’
‘~/tmp/scratch/RtmpdsOQEk’ ‘~/tmp/scratch/RtmpeQrZnN’
‘~/tmp/scratch/RtmpelBVI1’ ‘~/tmp/scratch/RtmpeskHt8’
‘~/tmp/scratch/RtmpeyzYg3’ ‘~/tmp/scratch/RtmpfHoXoa’
‘~/tmp/scratch/RtmpfVJVq2’ ‘~/tmp/scratch/RtmpfXAbQd’
‘~/tmp/scratch/Rtmpfmy7sr’ ‘~/tmp/scratch/RtmpfoNoO5’
‘~/tmp/scratch/RtmpfyNusM’ ‘~/tmp/scratch/RtmpgdJZAD’
‘~/tmp/scratch/RtmpgoZXwS’ ‘~/tmp/scratch/Rtmph9fwYo’
‘~/tmp/scratch/RtmphEnuQr’ ‘~/tmp/scratch/Rtmpi1ULzU’
‘~/tmp/scratch/Rtmpi8YTTV’ ‘~/tmp/scratch/RtmpiULkTL’
‘~/tmp/scratch/RtmpioAETw’ ‘~/tmp/scratch/Rtmpis0tv3’
‘~/tmp/scratch/Rtmpj6cF6T’ ‘~/tmp/scratch/RtmpjH6PMP’
‘~/tmp/scratch/RtmpjHinsl’ ‘~/tmp/scratch/Rtmpjg9Hy3’
‘~/tmp/scratch/RtmpkjgDxD’ ‘~/tmp/scratch/Rtmpm3oQ4t’
‘~/tmp/scratch/RtmpmBCSqR’ ‘~/tmp/scratch/RtmpnA6voB’
‘~/tmp/scratch/RtmpncZNdq’ ‘~/tmp/scratch/RtmpoEIjsZ’
‘~/tmp/scratch/RtmpoIAdki’ ‘~/tmp/scratch/RtmpoT6iIh’
‘~/tmp/scratch/RtmpoV6ttR’ ‘~/tmp/scratch/RtmpoVRmNh’
‘~/tmp/scratch/Rtmpp7diL2’ ‘~/tmp/scratch/RtmppHCcac’
‘~/tmp/scratch/RtmppkFuma’ ‘~/tmp/scratch/Rtmpq4lAvt’
‘~/tmp/scratch/RtmpqAadeq’ ‘~/tmp/scratch/RtmpqYlJi7’
‘~/tmp/scratch/RtmpqsAKzN’ ‘~/tmp/scratch/Rtmpr85G76’
‘~/tmp/scratch/Rtmps0G4C7’ ‘~/tmp/scratch/RtmptJzWf3’
‘~/tmp/scratch/RtmptmKAlG’ ‘~/tmp/scratch/Rtmptur1PM’
‘~/tmp/scratch/RtmptxpwAj’ ‘~/tmp/scratch/RtmpuGFlcr’
‘~/tmp/scratch/Rtmpwm6nwU’ ‘~/tmp/scratch/Rtmpx3bqcv’
‘~/tmp/scratch/Rtmpx4cxBz’ ‘~/tmp/scratch/Rtmpx9rw80’
‘~/tmp/scratch/RtmpxJ7ucD’ ‘~/tmp/scratch/Rtmpxafbg4’
‘~/tmp/scratch/Rtmpy22xls’ ‘~/tmp/scratch/RtmpyPWfgG’
‘~/tmp/scratch/RtmpzEvSze’ ‘~/tmp/scratch/Rtmpzb49uh’
‘~/tmp/scratch/ccMUhu4n.s’ ‘~/tmp/scratch/xvfb-run.0MBwyP’
‘~/tmp/scratch/xvfb-run.4o7e3U’ ‘~/tmp/scratch/xvfb-run.6WBLl4’
‘~/tmp/scratch/xvfb-run.7GvA0h’ ‘~/tmp/scratch/xvfb-run.8LmUWf’
‘~/tmp/scratch/xvfb-run.8UKHn1’ ‘~/tmp/scratch/xvfb-run.8xTqCk’
‘~/tmp/scratch/xvfb-run.AGE4Qx’ ‘~/tmp/scratch/xvfb-run.DCgdcb’
‘~/tmp/scratch/xvfb-run.DHrVJm’ ‘~/tmp/scratch/xvfb-run.DRgx9L’
‘~/tmp/scratch/xvfb-run.EOyNew’ ‘~/tmp/scratch/xvfb-run.FNoSzZ’
‘~/tmp/scratch/xvfb-run.FSWiLp’ ‘~/tmp/scratch/xvfb-run.G0Y7Z5’
‘~/tmp/scratch/xvfb-run.GxsFGr’ ‘~/tmp/scratch/xvfb-run.H1pHmS’
‘~/tmp/scratch/xvfb-run.HI81RE’ ‘~/tmp/scratch/xvfb-run.HZTWKK’
‘~/tmp/scratch/xvfb-run.Hn0GXf’ ‘~/tmp/scratch/xvfb-run.HwG8D7’
‘~/tmp/scratch/xvfb-run.JWs8SI’ ‘~/tmp/scratch/xvfb-run.KWv1NU’
‘~/tmp/scratch/xvfb-run.MP5wZ4’ ‘~/tmp/scratch/xvfb-run.MWpo0U’
‘~/tmp/scratch/xvfb-run.MnBjNL’ ‘~/tmp/scratch/xvfb-run.Nj2gpB’
‘~/tmp/scratch/xvfb-run.OMuuAd’ ‘~/tmp/scratch/xvfb-run.QPGrfO’
‘~/tmp/scratch/xvfb-run.QbK8CL’ ‘~/tmp/scratch/xvfb-run.RjEM2v’
‘~/tmp/scratch/xvfb-run.Ru50VV’ ‘~/tmp/scratch/xvfb-run.THOFhY’
‘~/tmp/scratch/xvfb-run.U51jJd’ ‘~/tmp/scratch/xvfb-run.VUYGjY’
‘~/tmp/scratch/xvfb-run.WS2weo’ ‘~/tmp/scratch/xvfb-run.WbGwYR’
‘~/tmp/scratch/xvfb-run.Xa74mY’ ‘~/tmp/scratch/xvfb-run.XeRUT1’
‘~/tmp/scratch/xvfb-run.aVBteW’ ‘~/tmp/scratch/xvfb-run.baBB0c’
‘~/tmp/scratch/xvfb-run.bgGqAS’ ‘~/tmp/scratch/xvfb-run.dUv3Zq’
‘~/tmp/scratch/xvfb-run.gyOeIw’ ‘~/tmp/scratch/xvfb-run.h8QBnD’
‘~/tmp/scratch/xvfb-run.hMb04D’ ‘~/tmp/scratch/xvfb-run.kPVin5’
‘~/tmp/scratch/xvfb-run.lkaTqT’ ‘~/tmp/scratch/xvfb-run.mkBJOZ’
‘~/tmp/scratch/xvfb-run.ni3sDi’ ‘~/tmp/scratch/xvfb-run.oGdEec’
‘~/tmp/scratch/xvfb-run.qHXJwf’ ‘~/tmp/scratch/xvfb-run.r3VWKP’
‘~/tmp/scratch/xvfb-run.r9MCze’ ‘~/tmp/scratch/xvfb-run.rbsVRF’
‘~/tmp/scratch/xvfb-run.tBUO1h’ ‘~/tmp/scratch/xvfb-run.tC3HsI’
‘~/tmp/scratch/xvfb-run.uq3dtj’ ‘~/tmp/scratch/xvfb-run.yUvQTa’
‘~/tmp/scratch/xvfb-run.yjJk0A’ ‘~/tmp/scratch/xvfb-run.zCgbuA’
‘~/tmp/scratch/xvfb-run.zcg4ez’ ‘~/tmp/scratch/xvfb-run.zpkEfe’
‘~/tmp/scratch/xvfb-run.zqP5sl’
- DONE
Status: 1 ERROR, 1 NOTE