* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘conos’ ...
** this is package ‘conos’ version ‘1.5.2’
** package ‘conos’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’
make[1]: Entering directory '/tmp/RtmpxV2WfK/R.INSTALL16f7c015a88e12/conos/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:5:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
RcppExports.cpp:332:45:   required from here
  332 |     rcpp_result_gen = Rcpp::wrap(spcov(m, cm));
      |                                             ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
RcppExports.cpp:332:45:   required from here
  332 |     rcpp_result_gen = Rcpp::wrap(spcov(m, cm));
      |                                             ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
RcppExports.cpp:332:39:   required from here
  332 |     rcpp_result_gen = Rcpp::wrap(spcov(m, cm));
      |                                  ~~~~~^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>]’
   77 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 0, int>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
  132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix<double, 0, int>; Src = Eigen::SparseMatrix<double, 0, int>; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13:   required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’
  713 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenWrap.h:387:24:   required from ‘Eigen::SparseMatrix<Scalar> Rcpp::traits::Exporter<Eigen::SparseMatrix<Scalar> >::get() [with T = double]’
  387 |                 return ans;
      |                        ^~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp/as.h:89:32:   required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
   89 |             return exporter.get();
      |                    ~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp/as.h:152:31:   required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
  152 |         return internal::as<T>(x, typename traits::r_type_traits<T>::r_category());
      |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include/Rcpp/InputParameter.h:72:59:   required from ‘Rcpp::ConstReferenceInputParameter<T>::ConstReferenceInputParameter(SEXP) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
   72 |         ConstReferenceInputParameter(SEXP x_) : obj( as<T>(x_) ){}
      |                                                      ~~~~~^~~~
RcppExports.cpp:330:86:   required from here
  330 |     Rcpp::traits::input_parameter< const Eigen::SparseMatrix<double>& >::type m(mSEXP);
      |                                                                                      ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Rjnmf.cpp -o Rjnmf.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c adjustedRand.cpp -o adjustedRand.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c checkfunctions.cpp -o checkfunctions.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from include/largeVis.h:7,
                 from checkfunctions.cpp:1:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cpca.cpp -o cpca.o
cpca.cpp: In function ‘Rcpp::List cpcaF(const arma::cube&, const arma::vec&, int, int, double, Rcpp::Nullable<Rcpp::Matrix<14> >, bool)’:
cpca.cpp:25:8: warning: unused variable ‘converged’ [-Wunused-variable]
   25 |   bool converged=false;
      |        ^~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c deltacut.cpp -o deltacut.o
deltacut.cpp: In function ‘double normalized_entropy(arma::ivec&, int)’:
deltacut.cpp:110:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  110 |       if(*i == labels.n_elem) { return(0.0); } // extreme case
      |          ~~~^~~~~~~~~~~~~~~~
deltacut.cpp: In function ‘Rcpp::List greedyModularityCutC(arma::imat&, arma::vec&, int, int, arma::ivec&, double, bool)’:
deltacut.cpp:267:13: warning: unused variable ‘ni’ [-Wunused-variable]
  267 |         int ni=r[i]=idm[r[i]]=leafid++;
      |             ^~
deltacut.cpp: In function ‘Rcpp::List _treeJaccard(arma::imat&, arma::imat&, arma::ivec&, arma::ivec&)’:
deltacut.cpp:312:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  312 |   for(int i=0;i<merges.n_rows;i++) {
      |               ~^~~~~~~~~~~~~~
deltacut.cpp:336:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  336 |     for(int j=0;j<mi.n_elem;j++) {
      |                 ~^~~~~~~~~~
deltacut.cpp: In function ‘Rcpp::List treeJaccard(arma::imat&, arma::imat&, arma::ivec&, Rcpp::Nullable<arma::Mat<int>&>)’:
deltacut.cpp:355:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  355 |     if(nleafs != clusters.n_cols) stop("number of leafs differs from the number of columns in the clusters matrix");
      |        ~~~~~~~^~~~~~~~~~~~~~~~~~
deltacut.cpp:375:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  375 |     for(int i=0;i<clm.n_rows;i++) {
      |                 ~^~~~~~~~~~~
deltacut.cpp: In function ‘std::vector<int, std::allocator<int> > get_membership_indices(int, arma::imat&, IIVM&)’:
deltacut.cpp:405:7: warning: unused variable ‘nleafs’ [-Wunused-variable]
  405 |   int nleafs=merges.n_rows+1; // number of leafs in the tree
      |       ^~~~~~
deltacut.cpp: In function ‘Rcpp::List scoreTreeConsistency(arma::imat&, arma::imat&, arma::ivec&, int)’:
deltacut.cpp:429:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  429 |   for(int i=0;i<ref.n_rows;i++) {
      |               ~^~~~~~~~~~~
deltacut.cpp:479:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  479 |     for(int i=0;i<currentCut.n_elem;i++) {
      |                 ~^~~~~~~~~~~~~~~~~~
deltacut.cpp:484:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  484 |         if(j>=leafidmap.n_elem) throw std::range_error("requesting out of range node in leafidmap");
      |            ~^~~~~~~~~~~~~~~~~~
deltacut.cpp:487:96: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  487 |           Rcout<<"idmap violation at j="<<j<<" ("<<ni<<"); test.n_rows="<<test.n_rows<<' '<<(ni>test.n_rows)<<endl<<flush;
      |                                                                                              ~~^~~~~~~~~~~~
deltacut.cpp:509:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  509 |     for(int i=0;i<currentCut.n_elem;i++) {
      |                 ~^~~~~~~~~~~~~~~~~~
deltacut.cpp:523:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  523 |     for(int i=0;i<ref.n_rows;i++) {
      |                 ~^~~~~~~~~~~
deltacut.cpp: In function ‘Rcpp::List maxStableClusters(arma::imat&, arma::vec&, double, int)’:
deltacut.cpp:578:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  578 |   for(int i=0;i<merges.n_rows;i++) {
      |               ~^~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c edgeFilter.cpp -o edgeFilter.o
edgeFilter.cpp: In function ‘Rcpp::NumericVector pareDownHubEdges(SEXP, Rcpp::IntegerVector, int, int)’:
edgeFilter.cpp:50:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   50 |     while(nedges > k && j<cido.n_elem && cid[ cido[j] ]>klow) {
      |                         ~^~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c edge_rebalancing.cpp -o edge_rebalancing.o
edge_rebalancing.cpp: In function ‘Rcpp::NumericMatrix getSumWeightMatrix(const std::vector<double>&, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, bool)’:
edge_rebalancing.cpp:18:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   18 |   for (int i = 0; i < weights.size(); ++i) {
      |                   ~~^~~~~~~~~~~~~~~~
edge_rebalancing.cpp: In function ‘std::vector<double> adjustWeightsByCellBalancingC(std::vector<double>, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, Rcpp::NumericMatrix)’:
edge_rebalancing.cpp:41:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   41 |   for (int i = 0; i < weights.size(); ++i) {
      |                   ~~^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c edgeweights.cpp -o edgeweights.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from edgeweights.cpp:3:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
edgeweights.cpp: In member function ‘Eigen::SparseMatrix<double, 0, int> ReferenceEdges::getWIJ()’:
edgeweights.cpp:149:31: warning: comparison of integer expressions of different signedness: ‘edgeidxtype’ {aka ‘int’} and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  149 |     for (edgeidxtype i = 0; i < edge_from.size(); i++) {
      |                             ~~^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 1, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 1, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1040:66:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1040 |   SparseMatrix<Scalar,IsRowMajor?ColMajor:RowMajor,StorageIndex> trMat(mat.rows(),mat.cols());
      |                                                                  ^~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
edgeweights.cpp:154:24:   required from here
  154 |     wij.setFromTriplets(tripletList.begin(),tripletList.end());
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 1, int>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 1, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 1, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1, int>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1181 |   const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator<OtherDerived>::Flags & RowMajorBit);
      |                                                                                             ^~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1063 |   mat = trMat;
      |   ~~~~^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
edgeweights.cpp:154:24:   required from here
  154 |     wij.setFromTriplets(tripletList.begin(),tripletList.end());
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:79:45:   required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 1, int>]’
   79 |   const bool transpose = (DstEvaluatorType::Flags & RowMajorBit) != (SrcEvaluatorType::Flags & RowMajorBit);
      |                                             ^~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::SparseMatrix<double, 1, int>; Functor = Eigen::internal::assign_op<double, double>; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’
  132 |     assign_sparse_to_sparse(dst.derived(), src.derived());
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:38:16:   required from ‘Derived& Eigen::SparseMatrixBase<Derived>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1, int>; Derived = Eigen::SparseMatrix<double, 0, int>]’
   37 |   internal::Assignment<Derived,OtherDerived,internal::assign_op<Scalar,typename OtherDerived::Scalar> >
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   38 |           ::run(derived(), other.derived(), internal::assign_op<Scalar,typename OtherDerived::Scalar>());
      |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1239:27:   required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::SparseMatrix<double, 1, int>; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1239 |     return Base::operator=(other.derived());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1063:7:   required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; SparseMatrixType = Eigen::SparseMatrix<double, 0, int>; DupFunctor = scalar_sum_op<double, double>]’
 1063 |   mat = trMat;
      |   ~~~~^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1110:92:   required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator<Eigen::Triplet<double>*, std::vector<Eigen::Triplet<double> > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
 1110 |   internal::set_from_triplets<InputIterators, SparseMatrix<Scalar,_Options,_StorageIndex> >(begin, end, *this, internal::scalar_sum_op<Scalar,Scalar>());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
edgeweights.cpp:154:24:   required from here
  154 |     wij.setFromTriplets(tripletList.begin(),tripletList.end());
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gradients.cpp -o gradients.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from include/largeVis.h:7,
                 from gradients.cpp:4:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
gradients.cpp: In member function ‘distancetype Gradient::distAndVector(const coordinatetype*, const coordinatetype*, coordinatetype*) const’:
gradients.cpp:21:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const dimidxtype’ {aka ‘const unsigned int’} [-Wsign-compare]
   21 |         for (int d = 0; d < D; d++) {
      |                         ~~^~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c graph_embedding.cpp -o graph_embedding.o
graph_embedding.cpp: In function ‘std::unordered_map<int, double> get_hitting_time_map(const std::vector<int>&, const std::vector<double>&)’:
graph_embedding.cpp:66:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   66 |   for (int v2 = 0; v2 < adjacent_ids.size(); ++v2) {
      |                    ~~~^~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp: In function ‘void dfs_hitting_time(const std::vector<std::vector<int> >&, const std::vector<std::vector<double> >&, int, std::vector<bool>&, path_map_t&, double, int, double, int, double)’:
graph_embedding.cpp:126:55: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<int, Paths>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  126 |   if ((current_prob < min_prob && result_paths.size() >= min_visited_verts) || current_prob < min_prob_lower)
      |                                   ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp:131:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  131 |   for (int i = 0; i < adjacency_list.at(vertex_id).size(); ++i)
      |                   ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp: In function ‘std::pair<std::vector<double>, std::vector<int> > hitting_time_per_neighbor(const std::vector<std::vector<int> >&, const std::vector<std::vector<double> >&, int, double, int, double, int)’:
graph_embedding.cpp:152:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  152 |   if (start_vertex < 0 || start_vertex >= adjacency_list.size())
      |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp: In function ‘std::pair<std::vector<std::vector<int> >, std::vector<std::vector<double> > > hitting_time_per_neighbors(const std::vector<std::vector<int> >&, const std::vector<std::vector<double> >&, int, int, double, int, double, int, bool)’:
graph_embedding.cpp:188:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  188 |   if (n_verts <= 0 || n_verts >= adjacency_list.size()) {
      |                       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp: In function ‘Rcpp::List commute_time_per_node(const std::vector<std::vector<int> >&, const std::vector<std::vector<double> >&, int, int, bool)’:
graph_embedding.cpp:247:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::vector<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  247 |     for (int v1 = 0; v1 < adjacency_list.size(); ++v1) {
      |                      ~~~^~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp:276:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::unordered_map<int, double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  276 |     for (int v1 = 0; v1 < hitting_times_map.size(); ++v1) {
      |                      ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp: In instantiation of ‘std::vector<T> reorder(const std::vector<T>&, std::vector<long unsigned int>, size_t) [with T = double; size_t = long unsigned int]’:
graph_embedding.cpp:171:31:   required from here
  171 |   auto values_sorted = reorder(values, sorted_ids, max_adj_num);
      |                        ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp:39:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   39 |   for (int i = 0; i < max_size; ++i) {
      |                   ~~^~~~~~~~~~
graph_embedding.cpp: In instantiation of ‘std::vector<T> reorder(const std::vector<T>&, std::vector<long unsigned int>, size_t) [with T = int; size_t = long unsigned int]’:
graph_embedding.cpp:172:32:   required from here
  172 |   auto indexes_sorted = reorder(indexes, sorted_ids, max_adj_num);
      |                         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
graph_embedding.cpp:39:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   39 |   for (int i = 0; i < max_size; ++i) {
      |                   ~~^~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c largeVis.cpp -o largeVis.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from include/largeVis.h:7,
                 from largeVis.cpp:4:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
largeVis.cpp: In constructor ‘MomentumVisualizer::MomentumVisualizer(vertexidxtype*, vertexidxtype*, coordinatetype*, const dimidxtype&, const vertexidxtype&, const edgeidxtype&, distancetype, const iterationtype&, const float&, const unsigned int&, const double&, const double&)’:
largeVis.cpp:164:45: warning: comparison of integer expressions of different signedness: ‘vertexidxtype’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
  164 |                 for (vertexidxtype i = 0; i != D*N; ++i) momentumarray[i] = 0;
      |                                           ~~^~~~~~
largeVis.cpp: In function ‘arma::mat sgd(arma::mat&, arma::ivec&, arma::ivec&, arma::ivec&, arma::vec&, const double&, const double&, const arma::uword&, const int&, const double&, Rcpp::Nullable<Rcpp::Vector<14, Rcpp::PreserveStorage> >, const bool&, Rcpp::Nullable<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::Nullable<Rcpp::Vector<13> >, bool)’:
largeVis.cpp:254:43: warning: comparison of integer expressions of different signedness: ‘edgeidxtype’ {aka ‘int’} and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  254 |                 for (edgeidxtype e = 0; e < targets_i.n_elem; ++e) negweights[targets_i[e]]++;
      |                                         ~~^~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c propagate_labels.cpp -o propagate_labels.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from propagate_labels.cpp:6:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘si_map_t parse_edges(const Rcpp::StringMatrix&, const std::vector<double>&, std::vector<Edge>&, s_vec_t)’:
propagate_labels.cpp:42:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   42 |   if (edge_verts.nrow() != edge_weights.size() || edge_verts.ncol() != 2)
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:50:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   50 |     for (size_t i = 0; i < edge_verts.nrow(); ++i) {
      |                        ~~^~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:57:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   57 |   for (size_t i = 0; i < edge_verts.nrow(); ++i) { // TODO: add informative message in case vertex name is not presented in the map
      |                      ~~^~~~~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘Rcpp::NumericMatrix propagate_labels(const Rcpp::StringMatrix&, const std::vector<double>&, const Rcpp::StringVector&, int, bool, double, double, double, bool)’:
propagate_labels.cpp:69:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   69 |   if (edge_verts.nrow() != edge_weights.size() || edge_verts.ncol() != 2)
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
propagate_labels.cpp:77:7:   required from here
   77 |   Mat label_probs = Mat::Zero(vertex_ids.size(), label_ids.size());
      |       ^~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
propagate_labels.cpp:77:7:   required from here
   77 |   Mat label_probs = Mat::Zero(vertex_ids.size(), label_ids.size());
      |       ^~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
propagate_labels.cpp:77:30:   required from here
   77 |   Mat label_probs = Mat::Zero(vertex_ids.size(), label_ids.size());
      |                     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
propagate_labels.cpp:80:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
   80 |   for (size_t i = 0; i < vert_labels.size(); ++i) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:95:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::unordered_map<std::__cxx11::basic_string<char>, long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   95 |   for (int v_id = 0; v_id < vertex_ids.size(); ++v_id) {
      |                      ~~~~~^~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:96:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::unordered_map<std::__cxx11::basic_string<char>, long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |     for (int l_id = 0; l_id < label_ids.size(); ++l_id) {
      |                        ~~~~~^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
  223 | template<typename Derived> class MapBase<Derived, WriteAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
  329 | class BlockImpl_dense<XprType,BlockRows,BlockCols, InnerPanel,true>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
  154 | class BlockImpl<XprType, BlockRows, BlockCols, InnerPanel, Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Block.h:103:81:   required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
  103 | template<typename XprType, int BlockRows, int BlockCols, bool InnerPanel> class Block
      |                                                                                 ^~~~~
propagate_labels.cpp:143:19:   required from here
  143 |         cm_new.row(e.v_start) += count_matrix.row(e.v_end) * weight;
      |         ~~~~~~~~~~^~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
propagate_labels.cpp:143:62:   required from here
  143 |         cm_new.row(e.v_start) += count_matrix.row(e.v_end) * weight;
      |                                                              ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
propagate_labels.cpp:143:62:   required from here
  143 |         cm_new.row(e.v_start) += count_matrix.row(e.v_end) * weight;
      |                                                              ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 1, -1>’
  178 | class Matrix
      |       ^~~~~~
propagate_labels.cpp:143:62:   required from here
  143 |         cm_new.row(e.v_start) += count_matrix.row(e.v_end) * weight;
      |                                                              ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘void smooth_count_matrix_c(const std::vector<Edge>&, Mat&, int, double, double, double, bool, bool, const std::vector<bool>&)’:
propagate_labels.cpp:162:38: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare]
  162 |       for (size_t row_id = 0; row_id < cm_new.rows(); ++row_id) {
      |                               ~~~~~~~^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
propagate_labels.cpp:168:26:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                          ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7:   required from ‘class Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >’
   42 | class ArrayWrapper : public ArrayBase<ArrayWrapper<ExpressionType> >
      |       ^~~~~~~~~~~~
propagate_labels.cpp:168:45:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34:   required from ‘class Eigen::ArrayBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >’
   39 | template<typename Derived> class ArrayBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > >, Eigen::Dense>’
   94 | class CwiseUnaryOpImpl
      |       ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > >’
   55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
      |       ^~~~~~~~~~~~
propagate_labels.cpp:168:51:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7:   required from ‘class Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >’
  140 | class MatrixWrapper : public MatrixBase<MatrixWrapper<ExpressionType> >
      |       ^~~~~~~~~~~~~
propagate_labels.cpp:168:60:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘SEXPREC* smooth_count_matrix(const Rcpp::StringMatrix&, const std::vector<double>&, const Rcpp::NumericMatrix&, const std::vector<bool>&, int, double, double, double, bool, bool)’:
propagate_labels.cpp:192:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  192 |   if (edge_verts.nrow() != edge_weights.size())
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘Rcpp::List adjacent_vertices(const Rcpp::StringMatrix&)’:
propagate_labels.cpp:228:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  228 |   for (size_t i = 0; i < edge_verts.nrow(); ++i) {
      |                      ~~^~~~~~~~~~~~~~~~~~~
propagate_labels.cpp: In function ‘Rcpp::List adjacent_vertex_weights(const Rcpp::StringMatrix&, const std::vector<double>&)’:
propagate_labels.cpp:241:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  241 |   for (size_t i = 0; i < edge_verts.nrow(); ++i) {
      |                      ~~^~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67:   required from ‘Derived& Eigen::DenseBase<Derived>::operator/=(const Scalar&) [with Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Scalar = double]’
   41 |   internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op<Scalar,Scalar>());
      |                                              ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:163:52:   required from here
  163 |         cm_new.row(row_id) /= sum_weights.at(row_id);
      |                                                    ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7:   required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >, Eigen::Dense>’
   94 | class CwiseUnaryOpImpl
      |       ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7:   required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >’
   55 | class CwiseUnaryOp : public CwiseUnaryOpImpl<UnaryOp, XprType, typename internal::traits<XprType>::StorageKind>, internal::no_assignment_operator
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:244:22:   required from ‘static Eigen::internal::lpNorm_selector<Derived, -1>::RealScalar Eigen::internal::lpNorm_selector<Derived, -1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >; RealScalar = double]’
  244 |     return m.cwiseAbs().maxCoeff();
      |            ~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:269:52:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = -1; Derived = Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  269 |   return internal::lpNorm_selector<Derived, p>::run(*this);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
propagate_labels.cpp:168:86:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:277:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
  739 |     CoeffReadCost = int(evaluator<Lhs>::CoeffReadCost) + int(evaluator<Rhs>::CoeffReadCost) + int(functor_traits<BinaryOp>::Cost),
      |                                         ^~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > > >’
  722 | struct evaluator<CwiseBinaryOp<BinaryOp, Lhs, Rhs> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >; Functor = add_assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >; Functor = Eigen::internal::add_assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >; Func = add_assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >; Func = add_assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator+=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, 1, -1> > >; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>]’
  177 |   call_assignment(derived(), other.derived(), internal::add_assign_op<Scalar,typename OtherDerived::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
propagate_labels.cpp:143:62:   required from here
  143 |         cm_new.row(e.v_start) += count_matrix.row(e.v_end) * weight;
      |                                                              ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >; Eigen::Index = long int]’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:243:63:   required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >; Func = Eigen::internal::scalar_max_op<double, double, 0>; Evaluator = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > > >; Scalar = double]’
  243 |     const Index alignedStart = internal::first_default_aligned(xpr);
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:418:56:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op<double, double, 0>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >; typename Eigen::internal::traits<T>::Scalar = double]’
  418 |   return internal::redux_impl<Func, ThisEvaluator>::run(thisEval, func, derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Redux.h:448:25:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::maxCoeff() const [with int NaNPropagation = 0; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >; typename Eigen::internal::traits<T>::Scalar = double]’
  448 |   return derived().redux(Eigen::internal::scalar_max_op<Scalar,Scalar, NaNPropagation>());
      |          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:466:37:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::maxCoeff() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > > >; typename Eigen::internal::traits<T>::Scalar = double]’
  466 |       return maxCoeff<PropagateFast>();
      |              ~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:244:33:   required from ‘static Eigen::internal::lpNorm_selector<Derived, -1>::RealScalar Eigen::internal::lpNorm_selector<Derived, -1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >; RealScalar = double]’
  244 |     return m.cwiseAbs().maxCoeff();
      |            ~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Dot.h:269:52:   required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = -1; Derived = Eigen::MatrixWrapper<const Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::ArrayWrapper<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, -1, -1>, const Eigen::Matrix<double, -1, -1> > > > >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]’
  269 |   return internal::lpNorm_selector<Derived, p>::run(*this);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
propagate_labels.cpp:168:86:   required from here
  168 |     inf_norm = (cm_new - count_matrix).array().abs().matrix().lpNorm<Eigen::Infinity>();
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  654 |   return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
      |                                                                          ^~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I"./include" -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native   -c spcov.cpp -o spcov.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:205,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Dense:1,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigen.h:25,
                 from spcov.cpp:9:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
   49 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
   51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
  222 | template<> struct unpacket_traits<Packet4f> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
  228 | template<> struct unpacket_traits<Packet2d> {
      |                                           ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:174:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   16 |   struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
   29 |   struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> {          \
      |                                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:165:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46:   required from here
   24 |     ResAlignment = traits<Quaternion<float> >::Alignment
      |                                              ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:271:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<float>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3:   required from here
   27 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__m128’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
  266 |     Alignment = internal::traits<Coefficients>::Alignment,
      |                                                 ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47:   required from here
   98 |     ResAlignment = traits<Quaternion<double> >::Alignment
      |                                               ^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
  178 | class Matrix
      |       ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
   46 |   typedef typename Coefficients::CoeffReturnType CoeffReturnType;
      |                                                  ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7:   required from ‘class Eigen::Quaternion<double>’
  273 | class Quaternion : public QuaternionBase<Quaternion<_Scalar,_Options> >
      |       ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3:   required from here
  102 |   {
      |   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26,
                 from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
   61 |   typedef Triplet<double> T;
      |                         ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
   22 |   typedef typename find_best_packet<_Scalar,size>::type PacketScalar;
      |                                                         ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
spcov.cpp:14:78:   required from here
   14 | Eigen::MatrixXd spcov(const Eigen::SparseMatrix<double>& m,Eigen::VectorXd cm) {
      |                                                                              ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  190 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
  208 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
  178 | class Matrix
      |       ^~~~~~
spcov.cpp:14:78:   required from here
   14 | Eigen::MatrixXd spcov(const Eigen::SparseMatrix<double>& m,Eigen::VectorXd cm) {
      |                                                                              ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
   98 | class PlainObjectBase : public internal::dense_xpr_base<Derived>::type
      |       ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, 1>’
  178 | class Matrix
      |       ^~~~~~
spcov.cpp:14:78:   required from here
   14 | Eigen::MatrixXd spcov(const Eigen::SparseMatrix<double>& m,Eigen::VectorXd cm) {
      |                                                                              ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> > >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> > >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9:   required from ‘class Eigen::internal::SparseTransposeImpl<const Eigen::SparseMatrix<double, 0, int>, 1024>’
   22 |   class SparseTransposeImpl<MatrixType,CompressedAccessBit>
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37:   required from ‘class Eigen::TransposeImpl<const Eigen::SparseMatrix<double, 0, int>, Eigen::Sparse>’
   45 | template<typename MatrixType> class TransposeImpl<MatrixType,Sparse>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
spcov.cpp:15:32:   required from here
   15 |   Eigen::MatrixXd v=m.transpose()*m;
      |                     ~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:145:7:   required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2, Eigen::Sparse>’
  145 | class ProductImpl : public internal::generic_xpr_base<Product<Lhs,Rhs,Option>, MatrixXpr, StorageKind>::type
      |       ^~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
spcov.cpp:15:35:   required from here
   15 |   Eigen::MatrixXd v=m.transpose()*m;
      |                                   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
  118 | template<typename MatrixType> class TransposeImpl<MatrixType,Dense>
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<double, -1, 1> >’
   52 | template<typename MatrixType> class Transpose
      |                                     ^~~~~~~~~
spcov.cpp:16:23:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |           ~~~~~~~~~~~~^~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:120:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0, 5>’
  120 | class dense_product_base
      |       ^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:152:7:   required from ‘class Eigen::ProductImpl<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
  152 | class ProductImpl<Lhs,Rhs,Option,Dense>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>’
   71 | class Product : public ProductImpl<_Lhs,_Rhs,Option,
      |       ^~~~~~~
spcov.cpp:16:24:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                        ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67:   required from ‘Derived& Eigen::DenseBase<Derived>::operator/=(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Scalar = double]’
   41 |   internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op<Scalar,Scalar>());
      |                                              ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
spcov.cpp:17:26:   required from here
   17 |   v/=((double) m.rows()-1);
      |                          ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::SparseMatrix<double, 0, int> >’
  100 | struct evaluator<const T>
      |        ^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:58:63:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::internal::IteratorBased, double>’
   58 |     typedef typename evaluator<ArgType>::InnerIterator        EvalIterator;
      |                                                               ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> > >’
   90 | struct evaluator : public unary_evaluator<T>
      |        ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseUtil.h:121:8:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Assign.h:75:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
   75 |   internal::call_assignment(derived(), other.derived());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:628:22:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  628 |       Base::operator=(other.derived());
      |       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:605:13:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  605 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
spcov.cpp:15:35:   required from here
   15 |   Eigen::MatrixXd v=m.transpose()*m;
      |                                   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, long int> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, long int> >’
   36 | class SparseCompressedBase
      |       ^~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, long int>’
   96 | class SparseMatrix
      |       ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:321:17:   required from ‘static void Eigen::internal::sparse_sparse_to_dense_product_selector<Lhs, Rhs, ResultType, 1, 0>::run(const Lhs&, const Rhs&, ResultType&) [with Lhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Rhs = Eigen::SparseMatrix<double, 0, int>; ResultType = Eigen::Matrix<double, -1, -1>]’
  321 |     ColMajorLhs lhsCol(lhs);
      |                 ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:55:103:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::addTo(Dest&, const ActualLhs&, const Rhs&, typename Eigen::internal::enable_if<Eigen::internal::is_same<typename Eigen::internal::evaluator_traits<OtherDerived>::Shape, Eigen::DenseShape>::value, int*>::type*) [with Dest = Eigen::Matrix<double, -1, -1>; ActualLhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Lhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Rhs = Eigen::SparseMatrix<double, 0, int>; int ProductType = 8; typename Eigen::internal::enable_if<Eigen::internal::is_same<typename Eigen::internal::evaluator_traits<OtherDerived>::Shape, Eigen::DenseShape>::value, int*>::type = int*; typename Eigen::internal::evaluator_traits<OtherDerived>::Shape = Eigen::DenseShape]’
   54 |     internal::sparse_sparse_to_dense_product_selector<typename remove_all<LhsNested>::type,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~            
   55 |                                                       typename remove_all<RhsNested>::type, Dest>::run(lhsNested,rhsNested,dst);
      |                                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:84:10:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::evalTo(Dest&, const Lhs&, const Rhs&, Eigen::DenseShape) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Rhs = Eigen::SparseMatrix<double, 0, int>; int ProductType = 8]’
   84 |     addTo(dst, lhs, rhs);
      |     ~~~~~^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:43:11:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Assign.h:75:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
   75 |   internal::call_assignment(derived(), other.derived());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:628:22:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  628 |       Base::operator=(other.derived());
      |       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:605:13:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  605 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
spcov.cpp:15:35:   required from here
   15 |   Eigen::MatrixXd v=m.transpose()*m;
      |                                   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, long int>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, long int> > >’
  336 |   typedef typename DenseCoeffsBase<Derived,ReadOnlyAccessors>::CoeffReturnType CoeffReturnType;
      |                                                                                ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8:   required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, long int> >’
 1505 | struct evaluator<SparseMatrix<_Scalar,_Options,_StorageIndex> >
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:277:18:   required from ‘void Eigen::internal::sparse_sparse_to_dense_product_impl(const Lhs&, const Rhs&, ResultType&) [with Lhs = Eigen::SparseMatrix<double, 0, long int>; Rhs = Eigen::SparseMatrix<double, 0, int>; ResultType = Eigen::Matrix<double, -1, -1>]’
  277 |   evaluator<Lhs> lhsEval(lhs);
      |                  ^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:322:78:   required from ‘static void Eigen::internal::sparse_sparse_to_dense_product_selector<Lhs, Rhs, ResultType, 1, 0>::run(const Lhs&, const Rhs&, ResultType&) [with Lhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Rhs = Eigen::SparseMatrix<double, 0, int>; ResultType = Eigen::Matrix<double, -1, -1>]’
  322 |     internal::sparse_sparse_to_dense_product_impl<ColMajorLhs,Rhs,ResultType>(lhsCol, rhs, res);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:55:103:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::SparseShape, Eigen::SparseShape, ProductType>::addTo(Dest&, const ActualLhs&, const Rhs&, typename Eigen::internal::enable_if<Eigen::internal::is_same<typename Eigen::internal::evaluator_traits<OtherDerived>::Shape, Eigen::DenseShape>::value, int*>::type*) [with Dest = Eigen::Matrix<double, -1, -1>; ActualLhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Lhs = Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >; Rhs = Eigen::SparseMatrix<double, 0, int>; int ProductType = 8; typename Eigen::internal::enable_if<Eigen::internal::is_same<typename Eigen::internal::evaluator_traits<OtherDerived>::Shape, Eigen::DenseShape>::value, int*>::type = int*; typename Eigen::internal::evaluator_traits<OtherDerived>::Shape = Eigen::DenseShape]’
   54 |     internal::sparse_sparse_to_dense_product_selector<typename remove_all<LhsNested>::type,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~            
   55 |                                                       typename remove_all<RhsNested>::type, Dest>::run(lhsNested,rhsNested,dst);
      |                                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:84:10:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Assign.h:75:28:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
   75 |   internal::call_assignment(derived(), other.derived());
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:628:22:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  628 |       Base::operator=(other.derived());
      |       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:605:13:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; Derived = Eigen::Matrix<double, -1, -1>]’
  605 |       *this = other.derived();
      |       ~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::SparseMatrix<double, 0, int> >, Eigen::SparseMatrix<double, 0, int>, 2>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
  423 |       : Base(other.derived())
      |                             ^
spcov.cpp:15:35:   required from here
   15 |   Eigen::MatrixXd v=m.transpose()*m;
      |                                   ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
  302 | class DenseCoeffsBase<Derived, WriteAccessors> : public DenseCoeffsBase<Derived, ReadOnlyAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
  555 | class DenseCoeffsBase<Derived, DirectWriteAccessors>
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
   37 | template<typename Derived> class MapBase<Derived, ReadOnlyAccessors>
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = sub_assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::sub_assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  164 |   call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >’
   60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp<NullaryOp, PlainObjectType> >::type, internal::no_assignment_operator
      |       ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28:   required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
   38 |                    >::type Scalar;
      |                            ^~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = sub_assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::sub_assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  164 |   call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
   41 | template<typename Derived> class DenseBase
      |                                  ^~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
   48 | template<typename Derived> class MatrixBase
      |                                  ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
  148 | class CwiseBinaryOpImpl
      |       ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >’
   77 | class CwiseBinaryOp :
      |       ^~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48:   required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Matrix<double, -1, 1>; Rhs = Eigen::Transpose<Eigen::Matrix<double, -1, 1> >; Func = generic_product_impl<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, Eigen::DenseShape, Eigen::DenseShape, 5>::set]’
  280 |     func(dst.col(j), rhsEval.coeff(Index(0),j) * actual_lhs);
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:317:41:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = sub_assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::sub_assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  164 |   call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
   56 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/Core:277:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >; Functor = assign_op<double, double>]’
  780 |   DstEvaluatorType dstEvaluator(dst);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >; Func = assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >]’
  836 |   call_assignment(dst, src, internal::assign_op<typename Dst::Scalar,typename Src::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/Assign.h:66:28:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20:   required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = sub_assign_op<double, double>]’
  774 |   SrcEvaluatorType srcEvaluator(src);
      |                    ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31:   required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix<double, -1, -1>; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Functor = Eigen::internal::sub_assign_op<double, double>; Weak = void]’
  954 |     call_dense_assignment_loop(dst, src, func);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>]’
  890 |   Assignment<ActualDstTypeCleaned,Src,Func>::run(actualDst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27:   required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::CwiseBinaryOp<scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Func = sub_assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
  858 |   call_assignment_no_alias(dst, src, func);
      |   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Product<Eigen::Matrix<double, -1, 1>, Eigen::Transpose<Eigen::Matrix<double, -1, 1> >, 0>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, -1>]’
  164 |   call_assignment(derived(), other.derived(), internal::sub_assign_op<Scalar,typename OtherDerived::Scalar>());
      |   ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spcov.cpp:16:44:   required from here
   16 |   v-=(cm* cm.transpose())*((double)m.rows());
      |                                            ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
 1071 |     PacketAlignment = unpacket_traits<PacketScalar>::alignment,
      |                                                      ^~~~~~~~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o conos.so RcppExports.o Rjnmf.o adjustedRand.o checkfunctions.o cpca.o deltacut.o edgeFilter.o edge_rebalancing.o edgeweights.o gradients.o graph_embedding.o largeVis.o propagate_labels.o spcov.o -L. -lpthread -lm -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpxV2WfK/R.INSTALL16f7c015a88e12/conos/src'
make[1]: Entering directory '/tmp/RtmpxV2WfK/R.INSTALL16f7c015a88e12/conos/src'
make[1]: Leaving directory '/tmp/RtmpxV2WfK/R.INSTALL16f7c015a88e12/conos/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-conos/00new/conos/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
in method for ‘getPca’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getPca’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getPca’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getOverdispersedGenes’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getOverdispersedGenes’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getOverdispersedGenes’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getOverdispersedGenes’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘getCellNames’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getCellNames’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getCellNames’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getCellNames’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘getGenes’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getGenes’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getGenes’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getGenes’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘edgeMat<-’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘edgeMat<-’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘edgeMat<-’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘edgeMat’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘edgeMat’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘edgeMat’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getCountMatrix’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getCountMatrix’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getCountMatrix’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getGeneExpression’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getGeneExpression’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘getGeneExpression’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getGeneExpression’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getRawCountMatrix’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getRawCountMatrix’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getRawCountMatrix’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getRawCountMatrix’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘getEmbedding’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getEmbedding’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getEmbedding’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getEmbedding’ with signature ‘"Conos"’: no definition for class “Conos”
in method for ‘getClustering’ with signature ‘"Pagoda2"’: no definition for class “Pagoda2”
in method for ‘getClustering’ with signature ‘"seurat"’: no definition for class “seurat”
in method for ‘getClustering’ with signature ‘"Seurat"’: no definition for class “Seurat”
in method for ‘getClustering’ with signature ‘"Conos"’: no definition for class “Conos”
Note: wrong number of arguments to '*' 
Note: wrong number of arguments to '*' 
Note: wrong number of arguments to 'exp' 
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (conos)