• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 13:57:39 UTC
• checking for file ‘cjoint/DESCRIPTION’ ... OK
• this is package ‘cjoint’ version ‘2.1.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cjoint’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/3s] OK
• checking loading without being on the library search path ... [3s/3s] OK
• checking whether startup messages can be suppressed ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [19s/23s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/2s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [5s/6s] OK
• checking for unstated dependencies in ‘demo’ ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [16s/23s] OK   Running ‘testthat.R’ [16s/22s]
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp039EHE’ ‘~/tmp/scratch/Rtmp14eD44’   ‘~/tmp/scratch/Rtmp1irp8g’ ‘~/tmp/scratch/Rtmp3Jj04B’   ‘~/tmp/scratch/Rtmp3S7Lcy’ ‘~/tmp/scratch/Rtmp3eX89C’   ‘~/tmp/scratch/Rtmp3s79Jv’ ‘~/tmp/scratch/Rtmp3t0ojy’   ‘~/tmp/scratch/Rtmp47B4Xh’ ‘~/tmp/scratch/Rtmp4ZcTTe’   ‘~/tmp/scratch/Rtmp4p3e4Z’ ‘~/tmp/scratch/Rtmp4uioG6’   ‘~/tmp/scratch/Rtmp4vRfMz’ ‘~/tmp/scratch/Rtmp55I3bY’   ‘~/tmp/scratch/Rtmp55huzu’ ‘~/tmp/scratch/Rtmp5W9YZa’   ‘~/tmp/scratch/Rtmp5gZsjU’ ‘~/tmp/scratch/Rtmp5hohAK’   ‘~/tmp/scratch/Rtmp5uIkWW’ ‘~/tmp/scratch/Rtmp61o7BD’   ‘~/tmp/scratch/Rtmp68aYrs’ ‘~/tmp/scratch/Rtmp7bWqyD’   ‘~/tmp/scratch/Rtmp7v1PKg’ ‘~/tmp/scratch/Rtmp86Qya6’   ‘~/tmp/scratch/Rtmp8YD0wt’ ‘~/tmp/scratch/Rtmp8dEvXN’   ‘~/tmp/scratch/Rtmp8g5PGn’ ‘~/tmp/scratch/Rtmp9822h1’   ‘~/tmp/scratch/Rtmp9C2UHk’ ‘~/tmp/scratch/Rtmp9cHPWS’   ‘~/tmp/scratch/RtmpA1J1kP’ ‘~/tmp/scratch/RtmpAdCNWh’   ‘~/tmp/scratch/RtmpAj9Pkn’ ‘~/tmp/scratch/RtmpAya4V2’   ‘~/tmp/scratch/RtmpBPbbcI’ ‘~/tmp/scratch/RtmpBSaKsl’   ‘~/tmp/scratch/RtmpBhDrIS’ ‘~/tmp/scratch/RtmpBp5LAg’   ‘~/tmp/scratch/RtmpC4JdB5’ ‘~/tmp/scratch/RtmpCQsS1e’   ‘~/tmp/scratch/RtmpCgXdcw’ ‘~/tmp/scratch/RtmpCumDgW’   ‘~/tmp/scratch/RtmpD1so7z’ ‘~/tmp/scratch/RtmpDguMXv’   ‘~/tmp/scratch/RtmpDtDUig’ ‘~/tmp/scratch/RtmpGB32ds’   ‘~/tmp/scratch/RtmpH0Y51L’ ‘~/tmp/scratch/RtmpHWAwHr’   ‘~/tmp/scratch/RtmpIXsAYf’ ‘~/tmp/scratch/RtmpJWAK5X’   ‘~/tmp/scratch/RtmpJmJXQS’ ‘~/tmp/scratch/RtmpKr8vxm’   ‘~/tmp/scratch/RtmpNAxUPO’ ‘~/tmp/scratch/RtmpNkAgZr’   ‘~/tmp/scratch/RtmpOWccYM’ ‘~/tmp/scratch/RtmpOaYA7S’   ‘~/tmp/scratch/RtmpPFobxZ’ ‘~/tmp/scratch/RtmpPNU3UA’   ‘~/tmp/scratch/RtmpQKGebO’ ‘~/tmp/scratch/RtmpQVdC3c’   ‘~/tmp/scratch/RtmpQn10QJ’ ‘~/tmp/scratch/RtmpQsVlve’   ‘~/tmp/scratch/RtmpRfSuQD’ ‘~/tmp/scratch/RtmpS0J4Hv’   ‘~/tmp/scratch/RtmpSL3YIF’ ‘~/tmp/scratch/RtmpSTJ2Zg’   ‘~/tmp/scratch/RtmpTmWyqO’ ‘~/tmp/scratch/RtmpTthRLV’   ‘~/tmp/scratch/RtmpUayTle’ ‘~/tmp/scratch/RtmpUfuUWO’   ‘~/tmp/scratch/RtmpVXVWe3’ ‘~/tmp/scratch/RtmpVfI7T1’   ‘~/tmp/scratch/RtmpWPG28d’ ‘~/tmp/scratch/RtmpWlZwgD’   ‘~/tmp/scratch/RtmpXGs2YP’ ‘~/tmp/scratch/RtmpY47YOC’   ‘~/tmp/scratch/RtmpY63gFn’ ‘~/tmp/scratch/RtmpYHoq1y’   ‘~/tmp/scratch/RtmpYhc8RW’ ‘~/tmp/scratch/RtmpYkAQcO’   ‘~/tmp/scratch/RtmpZnqvEn’ ‘~/tmp/scratch/RtmpZqUQNC’   ‘~/tmp/scratch/RtmpaPMJVZ’ ‘~/tmp/scratch/RtmpaZnhZj’   ‘~/tmp/scratch/RtmpabZ6b5’ ‘~/tmp/scratch/RtmpaboTtt’   ‘~/tmp/scratch/RtmpacDqfP’ ‘~/tmp/scratch/RtmpcsyZYG’   ‘~/tmp/scratch/Rtmpd7EfH9’ ‘~/tmp/scratch/RtmpdAZJ25’   ‘~/tmp/scratch/RtmpdF7wyn’ ‘~/tmp/scratch/RtmpdccVce’   ‘~/tmp/scratch/RtmpdeUrSt’ ‘~/tmp/scratch/Rtmpdsj3eF’   ‘~/tmp/scratch/Rtmpfb7JpY’ ‘~/tmp/scratch/Rtmpg5wikL’   ‘~/tmp/scratch/RtmpgdX2U8’ ‘~/tmp/scratch/RtmphISEvq’   ‘~/tmp/scratch/RtmphUbo7g’ ‘~/tmp/scratch/RtmphgX0AU’   ‘~/tmp/scratch/RtmphqzNdv’ ‘~/tmp/scratch/Rtmpi332Ev’   ‘~/tmp/scratch/RtmpiHIYFQ’ ‘~/tmp/scratch/RtmpiQ9tlw’   ‘~/tmp/scratch/RtmpjKWrtF’ ‘~/tmp/scratch/RtmpjmkexS’   ‘~/tmp/scratch/RtmpjsjTQf’ ‘~/tmp/scratch/Rtmpk1LzGr’   ‘~/tmp/scratch/Rtmpk9lJac’ ‘~/tmp/scratch/RtmpkTENqj’   ‘~/tmp/scratch/Rtmpku8gKa’ ‘~/tmp/scratch/Rtmpkv3aP9’   ‘~/tmp/scratch/RtmplZGYg2’ ‘~/tmp/scratch/RtmpljO5ZC’   ‘~/tmp/scratch/Rtmpm0mIqT’ ‘~/tmp/scratch/RtmpmHk1W0’   ‘~/tmp/scratch/RtmpmQAQRm’ ‘~/tmp/scratch/RtmpmhXDio’   ‘~/tmp/scratch/Rtmpn8BVhl’ ‘~/tmp/scratch/RtmpnEs8aP’   ‘~/tmp/scratch/RtmpngClq4’ ‘~/tmp/scratch/RtmpnuHAHQ’   ‘~/tmp/scratch/Rtmpo3isPX’ ‘~/tmp/scratch/RtmpoCVFeb’   ‘~/tmp/scratch/RtmpoPER4V’ ‘~/tmp/scratch/RtmponDuvL’   ‘~/tmp/scratch/Rtmpos3rrq’ ‘~/tmp/scratch/RtmpoyWx3r’   ‘~/tmp/scratch/Rtmpp586vt’ ‘~/tmp/scratch/RtmppBiwCG’   ‘~/tmp/scratch/RtmpqD2jXx’ ‘~/tmp/scratch/RtmprMvdrg’   ‘~/tmp/scratch/Rtmps2W7DU’ ‘~/tmp/scratch/RtmpsHq29l’   ‘~/tmp/scratch/RtmpsdT40a’ ‘~/tmp/scratch/RtmpsiTyzQ’   ‘~/tmp/scratch/RtmptBIZja’ ‘~/tmp/scratch/RtmptZmAy5’   ‘~/tmp/scratch/RtmpuPqaVI’ ‘~/tmp/scratch/RtmpuVzScK’   ‘~/tmp/scratch/RtmpujyaMv’ ‘~/tmp/scratch/Rtmpuyvasv’   ‘~/tmp/scratch/Rtmpv0zUh6’ ‘~/tmp/scratch/RtmpvtVQF8’   ‘~/tmp/scratch/RtmpwWNaje’ ‘~/tmp/scratch/RtmpwetUuI’   ‘~/tmp/scratch/RtmpxdiSNq’ ‘~/tmp/scratch/RtmpynHNAC’   ‘~/tmp/scratch/RtmpzNWr7L’ ‘~/tmp/scratch/RtmpzQz02i’   ‘~/tmp/scratch/RtmpzeBL4d’ ‘~/tmp/scratch/ccv3lhWr.s’   ‘~/tmp/scratch/xvfb-run.1HQXLW’ ‘~/tmp/scratch/xvfb-run.1cAnMv’   ‘~/tmp/scratch/xvfb-run.2uumPo’ ‘~/tmp/scratch/xvfb-run.373ZW4’   ‘~/tmp/scratch/xvfb-run.5rkgho’ ‘~/tmp/scratch/xvfb-run.65dVER’   ‘~/tmp/scratch/xvfb-run.9HfEY8’ ‘~/tmp/scratch/xvfb-run.Arfh1V’   ‘~/tmp/scratch/xvfb-run.Az1CXj’ ‘~/tmp/scratch/xvfb-run.BsO7SF’   ‘~/tmp/scratch/xvfb-run.D1yIdQ’ ‘~/tmp/scratch/xvfb-run.DisE9d’   ‘~/tmp/scratch/xvfb-run.F6pQJ3’ ‘~/tmp/scratch/xvfb-run.FL3STs’   ‘~/tmp/scratch/xvfb-run.FLJt5V’ ‘~/tmp/scratch/xvfb-run.FbwNB2’   ‘~/tmp/scratch/xvfb-run.Fmwd7c’ ‘~/tmp/scratch/xvfb-run.HYZh1n’   ‘~/tmp/scratch/xvfb-run.JNbisx’ ‘~/tmp/scratch/xvfb-run.JPlhUn’   ‘~/tmp/scratch/xvfb-run.JkFrWU’ ‘~/tmp/scratch/xvfb-run.Lra8i9’   ‘~/tmp/scratch/xvfb-run.N7ZKyq’ ‘~/tmp/scratch/xvfb-run.NKzWT8’   ‘~/tmp/scratch/xvfb-run.NYr2PQ’ ‘~/tmp/scratch/xvfb-run.OmZROi’   ‘~/tmp/scratch/xvfb-run.OtAAdW’ ‘~/tmp/scratch/xvfb-run.QVOxWb’   ‘~/tmp/scratch/xvfb-run.QZ8abs’ ‘~/tmp/scratch/xvfb-run.QwwDNI’   ‘~/tmp/scratch/xvfb-run.TEDxo8’ ‘~/tmp/scratch/xvfb-run.TR4ntx’   ‘~/tmp/scratch/xvfb-run.Te3Zpy’ ‘~/tmp/scratch/xvfb-run.UW3pTY’   ‘~/tmp/scratch/xvfb-run.Uy5wAz’ ‘~/tmp/scratch/xvfb-run.XK3z6e’   ‘~/tmp/scratch/xvfb-run.XmNzc8’ ‘~/tmp/scratch/xvfb-run.Yl9ZOU’   ‘~/tmp/scratch/xvfb-run.Z0oHSX’ ‘~/tmp/scratch/xvfb-run.aMhRWA’   ‘~/tmp/scratch/xvfb-run.c3cjZb’ ‘~/tmp/scratch/xvfb-run.cq3jQi’   ‘~/tmp/scratch/xvfb-run.f8KjaQ’ ‘~/tmp/scratch/xvfb-run.gW3xdn’   ‘~/tmp/scratch/xvfb-run.gvMd9l’ ‘~/tmp/scratch/xvfb-run.iXso5H’   ‘~/tmp/scratch/xvfb-run.kg4sZ2’ ‘~/tmp/scratch/xvfb-run.l4yyRq’   ‘~/tmp/scratch/xvfb-run.lIFsng’ ‘~/tmp/scratch/xvfb-run.lJhFv7’   ‘~/tmp/scratch/xvfb-run.mBHx3m’ ‘~/tmp/scratch/xvfb-run.oatsTW’   ‘~/tmp/scratch/xvfb-run.pEA5xd’ ‘~/tmp/scratch/xvfb-run.pfmtr1’   ‘~/tmp/scratch/xvfb-run.shXnSM’ ‘~/tmp/scratch/xvfb-run.tJyFV5’   ‘~/tmp/scratch/xvfb-run.ugZfgO’ ‘~/tmp/scratch/xvfb-run.uhvBXQ’   ‘~/tmp/scratch/xvfb-run.wuRNFO’ ‘~/tmp/scratch/xvfb-run.xWT1SW’   ‘~/tmp/scratch/xvfb-run.yiiOAg’ ‘~/tmp/scratch/xvfb-run.zXjoGs’   ‘~/tmp/scratch/xvfb-run.zkQDFZ’ ‘~/tmp/scratch/xvfb-run.zktnLA’   ‘~/.cache/fontconfig’   ‘~/.cache/fontconfig/5a3986770769dd5da1918333078999c9-le64.cache-9’   ‘~/.cache/fontconfig/CACHEDIR.TAG’
• DONE

Status: 1 NOTE