• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 13:48:56 UTC
• checking for file ‘cancerGI/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘cancerGI’ version ‘1.0.1’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = c("Audrey", "Qiuyan"),                       family = "Fu",                       role = "aut"),                person(given = "Xiaoyue",                       family = "Wang",                       role = "aut"),                person(given = c("Audrey", "Q."),                       family = "Fu",                       role = "cre",                       email = "audreyqyfu@gmail.com")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cancerGI’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [12s/17s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [7s/9s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0vzQil’ ‘~/tmp/scratch/Rtmp1IFXRY’   ‘~/tmp/scratch/Rtmp1RD5Bt’ ‘~/tmp/scratch/Rtmp2Iq2lw’   ‘~/tmp/scratch/Rtmp2zWVKh’ ‘~/tmp/scratch/Rtmp34yd6H’   ‘~/tmp/scratch/Rtmp4MAXFg’ ‘~/tmp/scratch/Rtmp4lRx0P’   ‘~/tmp/scratch/Rtmp4mu9Jv’ ‘~/tmp/scratch/Rtmp4xTg95’   ‘~/tmp/scratch/Rtmp5AZoUz’ ‘~/tmp/scratch/Rtmp6ENpXx’   ‘~/tmp/scratch/Rtmp6aUYuJ’ ‘~/tmp/scratch/Rtmp9JMzSp’   ‘~/tmp/scratch/Rtmp9RmeMC’ ‘~/tmp/scratch/Rtmp9RnojE’   ‘~/tmp/scratch/Rtmp9zI0PY’ ‘~/tmp/scratch/RtmpB3gCLP’   ‘~/tmp/scratch/RtmpB8hTcr’ ‘~/tmp/scratch/RtmpBGWB76’   ‘~/tmp/scratch/RtmpBcWjqR’ ‘~/tmp/scratch/RtmpBkc7OO’   ‘~/tmp/scratch/RtmpBoZqqx’ ‘~/tmp/scratch/RtmpBqbvM0’   ‘~/tmp/scratch/RtmpBvqoel’ ‘~/tmp/scratch/RtmpCMJzMD’   ‘~/tmp/scratch/RtmpD4NNdx’ ‘~/tmp/scratch/RtmpEJUQr2’   ‘~/tmp/scratch/RtmpFx9LOU’ ‘~/tmp/scratch/RtmpG29hRl’   ‘~/tmp/scratch/RtmpGqiU6w’ ‘~/tmp/scratch/RtmpHLIprf’   ‘~/tmp/scratch/RtmpHLs30O’ ‘~/tmp/scratch/RtmpHQSA6V’   ‘~/tmp/scratch/RtmpJA3K5e’ ‘~/tmp/scratch/RtmpJoPKTP’   ‘~/tmp/scratch/RtmpL3A1OI’ ‘~/tmp/scratch/RtmpLlWWHZ’   ‘~/tmp/scratch/RtmpLruvE5’ ‘~/tmp/scratch/RtmpMj6TgF’   ‘~/tmp/scratch/RtmpMuJrdl’ ‘~/tmp/scratch/RtmpNXSq5B’   ‘~/tmp/scratch/RtmpNoP5tt’ ‘~/tmp/scratch/RtmpNwMaRe’   ‘~/tmp/scratch/RtmpOSrEhN’ ‘~/tmp/scratch/RtmpPKy0dF’   ‘~/tmp/scratch/RtmpPLyXpI’ ‘~/tmp/scratch/RtmpPQYtNK’   ‘~/tmp/scratch/RtmpQgAWeJ’ ‘~/tmp/scratch/RtmpQpU7ro’   ‘~/tmp/scratch/RtmpRGcpRm’ ‘~/tmp/scratch/RtmpRsROeo’   ‘~/tmp/scratch/RtmpSH0lW4’ ‘~/tmp/scratch/RtmpSJShPD’   ‘~/tmp/scratch/RtmpSdEXSp’ ‘~/tmp/scratch/RtmpSkW18s’   ‘~/tmp/scratch/RtmpSoc0SY’ ‘~/tmp/scratch/RtmpSv4SWc’   ‘~/tmp/scratch/RtmpTBGa6d’ ‘~/tmp/scratch/RtmpTCVgSP’   ‘~/tmp/scratch/RtmpTRmXCQ’ ‘~/tmp/scratch/RtmpU16zyi’   ‘~/tmp/scratch/RtmpU83XKU’ ‘~/tmp/scratch/RtmpUfU1iv’   ‘~/tmp/scratch/RtmpVdvhpq’ ‘~/tmp/scratch/RtmpWPJCcy’   ‘~/tmp/scratch/RtmpWal1PH’ ‘~/tmp/scratch/RtmpXRRfU4’   ‘~/tmp/scratch/RtmpXtc0IR’ ‘~/tmp/scratch/RtmpYAuuxK’   ‘~/tmp/scratch/RtmpYNOqn9’ ‘~/tmp/scratch/RtmpYWq0Tn’   ‘~/tmp/scratch/RtmpYpvPGu’ ‘~/tmp/scratch/RtmpZ5o8ii’   ‘~/tmp/scratch/RtmpZ9A355’ ‘~/tmp/scratch/RtmpZBCVRF’   ‘~/tmp/scratch/RtmpZMRQi7’ ‘~/tmp/scratch/RtmpZX2dPw’   ‘~/tmp/scratch/RtmpZejDJi’ ‘~/tmp/scratch/RtmpZuspPd’   ‘~/tmp/scratch/RtmpaVBh0J’ ‘~/tmp/scratch/Rtmpafg322’   ‘~/tmp/scratch/RtmpajqRvt’ ‘~/tmp/scratch/RtmpbcZYvw’   ‘~/tmp/scratch/RtmpbnQpN9’ ‘~/tmp/scratch/RtmpceycMc’   ‘~/tmp/scratch/RtmpckPfJc’ ‘~/tmp/scratch/Rtmpd0M8oi’   ‘~/tmp/scratch/RtmpdJAoZG’ ‘~/tmp/scratch/RtmpdKC7a7’   ‘~/tmp/scratch/RtmpdsJo6U’ ‘~/tmp/scratch/Rtmpe3LBM7’   ‘~/tmp/scratch/Rtmpe7Ybvv’ ‘~/tmp/scratch/RtmpefsvLa’   ‘~/tmp/scratch/RtmpfSr047’ ‘~/tmp/scratch/RtmpfgwEe2’   ‘~/tmp/scratch/Rtmpi3KcSG’ ‘~/tmp/scratch/Rtmpi5CpPh’   ‘~/tmp/scratch/Rtmpi7ENlc’ ‘~/tmp/scratch/RtmpizpMEH’   ‘~/tmp/scratch/Rtmpj5QdcO’ ‘~/tmp/scratch/Rtmpj9ldks’   ‘~/tmp/scratch/RtmpjGnMmz’ ‘~/tmp/scratch/RtmpjQNENe’   ‘~/tmp/scratch/RtmpjnkmSf’ ‘~/tmp/scratch/RtmpjnoW45’   ‘~/tmp/scratch/Rtmpk2Z1Kd’ ‘~/tmp/scratch/RtmpkUp4SP’   ‘~/tmp/scratch/RtmpkqLe3k’ ‘~/tmp/scratch/Rtmpl5NnBT’   ‘~/tmp/scratch/RtmplI5DYX’ ‘~/tmp/scratch/RtmplqKFkC’   ‘~/tmp/scratch/Rtmplv9Fxi’ ‘~/tmp/scratch/RtmpmHCoFB’   ‘~/tmp/scratch/Rtmpmkl1Cv’ ‘~/tmp/scratch/RtmpmlexJB’   ‘~/tmp/scratch/RtmpnEGNve’ ‘~/tmp/scratch/RtmpnIqJ7k’   ‘~/tmp/scratch/RtmpoYQD6q’ ‘~/tmp/scratch/RtmpoqFcRF’   ‘~/tmp/scratch/Rtmpp2k3Y9’ ‘~/tmp/scratch/RtmppKWr6x’   ‘~/tmp/scratch/Rtmppc2dEy’ ‘~/tmp/scratch/RtmpqUJYRo’   ‘~/tmp/scratch/RtmpqaJx0l’ ‘~/tmp/scratch/RtmpqbKges’   ‘~/tmp/scratch/Rtmprbkn9R’ ‘~/tmp/scratch/RtmprkgZ01’   ‘~/tmp/scratch/Rtmps9JelB’ ‘~/tmp/scratch/RtmpsEcWne’   ‘~/tmp/scratch/RtmpshJcCJ’ ‘~/tmp/scratch/RtmpsoWkoW’   ‘~/tmp/scratch/RtmpstWngl’ ‘~/tmp/scratch/RtmpsxXpsZ’   ‘~/tmp/scratch/RtmptgBJhG’ ‘~/tmp/scratch/RtmptkmH47’   ‘~/tmp/scratch/Rtmptr12w2’ ‘~/tmp/scratch/Rtmpu4FmRl’   ‘~/tmp/scratch/Rtmpud14oB’ ‘~/tmp/scratch/RtmpvMVIRr’   ‘~/tmp/scratch/Rtmpw7n4Bz’ ‘~/tmp/scratch/RtmpwhbkJp’   ‘~/tmp/scratch/RtmpyMqCTW’ ‘~/tmp/scratch/RtmpyVabUb’   ‘~/tmp/scratch/Rtmpyci3Ph’ ‘~/tmp/scratch/Rtmpz7HQ2p’   ‘~/tmp/scratch/RtmpzROP34’ ‘~/tmp/scratch/RtmpzX8Ls6’   ‘~/tmp/scratch/RtmpzrkXW4’ ‘~/tmp/scratch/cc9aFoMR.s’   ‘~/tmp/scratch/xvfb-run.0gIf9h’ ‘~/tmp/scratch/xvfb-run.1Kxd0u’   ‘~/tmp/scratch/xvfb-run.4jAnLS’ ‘~/tmp/scratch/xvfb-run.4ykrSP’   ‘~/tmp/scratch/xvfb-run.6954jg’ ‘~/tmp/scratch/xvfb-run.8hK5eW’   ‘~/tmp/scratch/xvfb-run.8uhUUh’ ‘~/tmp/scratch/xvfb-run.AX9SNQ’   ‘~/tmp/scratch/xvfb-run.Axo9iw’ ‘~/tmp/scratch/xvfb-run.BWMXxR’   ‘~/tmp/scratch/xvfb-run.F2eqdg’ ‘~/tmp/scratch/xvfb-run.H84yse’   ‘~/tmp/scratch/xvfb-run.HFZBTF’ ‘~/tmp/scratch/xvfb-run.JC8rp2’   ‘~/tmp/scratch/xvfb-run.JeDTF5’ ‘~/tmp/scratch/xvfb-run.OXaa97’   ‘~/tmp/scratch/xvfb-run.Ooc575’ ‘~/tmp/scratch/xvfb-run.OodJCX’   ‘~/tmp/scratch/xvfb-run.TXcjeq’ ‘~/tmp/scratch/xvfb-run.Tmtrdw’   ‘~/tmp/scratch/xvfb-run.WKUh3X’ ‘~/tmp/scratch/xvfb-run.WbBrUc’   ‘~/tmp/scratch/xvfb-run.Wxg6Yl’ ‘~/tmp/scratch/xvfb-run.Y1koyv’   ‘~/tmp/scratch/xvfb-run.YTHekC’ ‘~/tmp/scratch/xvfb-run.Z21DAF’   ‘~/tmp/scratch/xvfb-run.ZsXZ6p’ ‘~/tmp/scratch/xvfb-run.aM29iA’   ‘~/tmp/scratch/xvfb-run.bsr9w6’ ‘~/tmp/scratch/xvfb-run.cAJCHC’   ‘~/tmp/scratch/xvfb-run.cS5WwB’ ‘~/tmp/scratch/xvfb-run.cbKB13’   ‘~/tmp/scratch/xvfb-run.cgFyaa’ ‘~/tmp/scratch/xvfb-run.exj15U’   ‘~/tmp/scratch/xvfb-run.fdB1nK’ ‘~/tmp/scratch/xvfb-run.g7P5mI’   ‘~/tmp/scratch/xvfb-run.hpaAYF’ ‘~/tmp/scratch/xvfb-run.jkg9V6’   ‘~/tmp/scratch/xvfb-run.nuTz7T’ ‘~/tmp/scratch/xvfb-run.of7L3M’   ‘~/tmp/scratch/xvfb-run.oph1fE’ ‘~/tmp/scratch/xvfb-run.qAg3yy’   ‘~/tmp/scratch/xvfb-run.qFRrOJ’ ‘~/tmp/scratch/xvfb-run.qPvs4K’   ‘~/tmp/scratch/xvfb-run.qq7Odf’ ‘~/tmp/scratch/xvfb-run.ro34ww’   ‘~/tmp/scratch/xvfb-run.sMilTs’ ‘~/tmp/scratch/xvfb-run.sO74jM’   ‘~/tmp/scratch/xvfb-run.sv6UW9’ ‘~/tmp/scratch/xvfb-run.uh0RPD’   ‘~/tmp/scratch/xvfb-run.uxdfyp’ ‘~/tmp/scratch/xvfb-run.v2n4q2’   ‘~/tmp/scratch/xvfb-run.vZhz3A’ ‘~/tmp/scratch/xvfb-run.vdkeTt’   ‘~/tmp/scratch/xvfb-run.w8iuSs’ ‘~/tmp/scratch/xvfb-run.weFfB4’
• DONE

Status: 2 NOTEs