• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 13:49:21 UTC
• checking for file ‘cancerGI/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘cancerGI’ version ‘1.0.1’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = c("Audrey", "Qiuyan"),                       family = "Fu",                       role = "aut"),                person(given = "Xiaoyue",                       family = "Wang",                       role = "aut"),                person(given = c("Audrey", "Q."),                       family = "Fu",                       role = "cre",                       email = "audreyqyfu@gmail.com")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cancerGI’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [12s/13s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [7s/7s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0mslK4’ ‘~/tmp/scratch/Rtmp2F1Hwh’   ‘~/tmp/scratch/Rtmp2NhgRg’ ‘~/tmp/scratch/Rtmp3nj4lS’   ‘~/tmp/scratch/Rtmp4Nv2ys’ ‘~/tmp/scratch/Rtmp4hxK2r’   ‘~/tmp/scratch/Rtmp4o84lb’ ‘~/tmp/scratch/Rtmp5Fljby’   ‘~/tmp/scratch/Rtmp5cuVVm’ ‘~/tmp/scratch/Rtmp5zKgtM’   ‘~/tmp/scratch/Rtmp66IZ73’ ‘~/tmp/scratch/Rtmp6SEgVB’   ‘~/tmp/scratch/Rtmp79z8ca’ ‘~/tmp/scratch/Rtmp8MhL21’   ‘~/tmp/scratch/Rtmp8RG7k0’ ‘~/tmp/scratch/Rtmp9gpjc2’   ‘~/tmp/scratch/RtmpA5JS92’ ‘~/tmp/scratch/RtmpALeN41’   ‘~/tmp/scratch/RtmpARUcx9’ ‘~/tmp/scratch/RtmpAZ4plx’   ‘~/tmp/scratch/RtmpAZ9CB4’ ‘~/tmp/scratch/RtmpB1VeSQ’   ‘~/tmp/scratch/RtmpB4NCCQ’ ‘~/tmp/scratch/RtmpBUFznI’   ‘~/tmp/scratch/RtmpBdqrzA’ ‘~/tmp/scratch/RtmpBeCFmC’   ‘~/tmp/scratch/RtmpD7m71s’ ‘~/tmp/scratch/RtmpDSEVUt’   ‘~/tmp/scratch/RtmpDqtOtA’ ‘~/tmp/scratch/RtmpDr86Qd’   ‘~/tmp/scratch/RtmpEYCOSf’ ‘~/tmp/scratch/RtmpEgMSW7’   ‘~/tmp/scratch/RtmpEw7ElX’ ‘~/tmp/scratch/RtmpFYfNTb’   ‘~/tmp/scratch/RtmpFn0BuY’ ‘~/tmp/scratch/RtmpFvquFy’   ‘~/tmp/scratch/RtmpGG38oW’ ‘~/tmp/scratch/RtmpGjQbxg’   ‘~/tmp/scratch/RtmpHdxGTr’ ‘~/tmp/scratch/RtmpIOu9r4’   ‘~/tmp/scratch/RtmpIUeoj1’ ‘~/tmp/scratch/RtmpIsoDon’   ‘~/tmp/scratch/RtmpJOeyMj’ ‘~/tmp/scratch/RtmpJsB5EA’   ‘~/tmp/scratch/RtmpKt3Pp5’ ‘~/tmp/scratch/RtmpL3GRQC’   ‘~/tmp/scratch/RtmpLC3Cq7’ ‘~/tmp/scratch/RtmpLFKZDP’   ‘~/tmp/scratch/RtmpLOejpe’ ‘~/tmp/scratch/RtmpLYisrQ’   ‘~/tmp/scratch/RtmpNC3BsQ’ ‘~/tmp/scratch/RtmpNSY4Lm’   ‘~/tmp/scratch/RtmpNXdFFF’ ‘~/tmp/scratch/RtmpNXwlaa’   ‘~/tmp/scratch/RtmpNoFSQ1’ ‘~/tmp/scratch/RtmpO5wjfa’   ‘~/tmp/scratch/RtmpOTqwPe’ ‘~/tmp/scratch/RtmpOZSXLw’   ‘~/tmp/scratch/RtmpPNJJPN’ ‘~/tmp/scratch/RtmpPjf8iQ’   ‘~/tmp/scratch/RtmpQ03Jmb’ ‘~/tmp/scratch/RtmpQ7XfR8’   ‘~/tmp/scratch/RtmpRqakqt’ ‘~/tmp/scratch/RtmpSn883x’   ‘~/tmp/scratch/RtmpSqOJDZ’ ‘~/tmp/scratch/RtmpTS3Zg2’   ‘~/tmp/scratch/RtmpTYtrQV’ ‘~/tmp/scratch/RtmpUKxQUC’   ‘~/tmp/scratch/RtmpUc0IlP’ ‘~/tmp/scratch/RtmpUscPK3’   ‘~/tmp/scratch/RtmpV07oFb’ ‘~/tmp/scratch/RtmpVHisqG’   ‘~/tmp/scratch/RtmpVRX4ll’ ‘~/tmp/scratch/RtmpVmT647’   ‘~/tmp/scratch/RtmpVuxMoN’ ‘~/tmp/scratch/RtmpW85ppD’   ‘~/tmp/scratch/RtmpWAaViJ’ ‘~/tmp/scratch/RtmpXLfAa8’   ‘~/tmp/scratch/RtmpXSQ2bt’ ‘~/tmp/scratch/RtmpY9LkAp’   ‘~/tmp/scratch/RtmpYaPZq6’ ‘~/tmp/scratch/RtmpYhhANk’   ‘~/tmp/scratch/RtmpYko6jd’ ‘~/tmp/scratch/RtmpYwIUb6’   ‘~/tmp/scratch/RtmpZ2PZK9’ ‘~/tmp/scratch/RtmpZ9YPwT’   ‘~/tmp/scratch/RtmpaDTwN5’ ‘~/tmp/scratch/RtmpaX9q7O’   ‘~/tmp/scratch/RtmpaiXpWn’ ‘~/tmp/scratch/Rtmpal56Iz’   ‘~/tmp/scratch/Rtmpc4QxNW’ ‘~/tmp/scratch/RtmpcSCNrZ’   ‘~/tmp/scratch/RtmpcuRzXH’ ‘~/tmp/scratch/RtmpdizOyi’   ‘~/tmp/scratch/Rtmpec4Ifz’ ‘~/tmp/scratch/Rtmpf6nWvF’   ‘~/tmp/scratch/RtmpfBNhvE’ ‘~/tmp/scratch/RtmpfKS7kb’   ‘~/tmp/scratch/RtmpfigcFB’ ‘~/tmp/scratch/RtmpfoGflQ’   ‘~/tmp/scratch/RtmpgUZubi’ ‘~/tmp/scratch/RtmpghChbm’   ‘~/tmp/scratch/RtmpgoocHm’ ‘~/tmp/scratch/Rtmph9A23R’   ‘~/tmp/scratch/RtmphyWLQI’ ‘~/tmp/scratch/Rtmpi4kWFm’   ‘~/tmp/scratch/Rtmpize2FP’ ‘~/tmp/scratch/RtmplNrF2W’   ‘~/tmp/scratch/RtmplWDnAh’ ‘~/tmp/scratch/Rtmpm4wNKw’   ‘~/tmp/scratch/Rtmpm8IGPU’ ‘~/tmp/scratch/RtmpmOqm5S’   ‘~/tmp/scratch/RtmpmfHhMJ’ ‘~/tmp/scratch/Rtmpmu1UOA’   ‘~/tmp/scratch/RtmpnAVsjj’ ‘~/tmp/scratch/RtmpnLp7sX’   ‘~/tmp/scratch/RtmpnVPUgI’ ‘~/tmp/scratch/RtmpnbfFks’   ‘~/tmp/scratch/RtmpngCtnL’ ‘~/tmp/scratch/RtmpoRVOSR’   ‘~/tmp/scratch/RtmpotFQyy’ ‘~/tmp/scratch/RtmppBKGUu’   ‘~/tmp/scratch/RtmppQTK87’ ‘~/tmp/scratch/RtmppoM2TU’   ‘~/tmp/scratch/RtmprnHIrq’ ‘~/tmp/scratch/RtmpsC3gzd’   ‘~/tmp/scratch/Rtmpu0CZSv’ ‘~/tmp/scratch/Rtmpu8wNcG’   ‘~/tmp/scratch/RtmpuKyyLO’ ‘~/tmp/scratch/RtmpujqesH’   ‘~/tmp/scratch/RtmputthGU’ ‘~/tmp/scratch/RtmpvMvVZN’   ‘~/tmp/scratch/RtmpvupVuI’ ‘~/tmp/scratch/RtmpwMGGu2’   ‘~/tmp/scratch/RtmpwPcMF1’ ‘~/tmp/scratch/RtmpxJD7BT’   ‘~/tmp/scratch/RtmpxVsv4d’ ‘~/tmp/scratch/RtmpyYxku0’   ‘~/tmp/scratch/RtmpynAvPk’ ‘~/tmp/scratch/RtmpzPLLF6’   ‘~/tmp/scratch/RtmpzbmNWq’ ‘~/tmp/scratch/RtmpzqCYTd’   ‘~/tmp/scratch/RtmpzvFWh1’ ‘~/tmp/scratch/cczIVRNH.s’   ‘~/tmp/scratch/xvfb-run.16ddtj’ ‘~/tmp/scratch/xvfb-run.3cCtkB’   ‘~/tmp/scratch/xvfb-run.3wHfsl’ ‘~/tmp/scratch/xvfb-run.4VArGG’   ‘~/tmp/scratch/xvfb-run.4XD2S2’ ‘~/tmp/scratch/xvfb-run.5Hm5b4’   ‘~/tmp/scratch/xvfb-run.68Mtn6’ ‘~/tmp/scratch/xvfb-run.7Tbzds’   ‘~/tmp/scratch/xvfb-run.7WVrU9’ ‘~/tmp/scratch/xvfb-run.7clWdv’   ‘~/tmp/scratch/xvfb-run.8DMILD’ ‘~/tmp/scratch/xvfb-run.8dOWxA’   ‘~/tmp/scratch/xvfb-run.9c0UIY’ ‘~/tmp/scratch/xvfb-run.Ah2Z5a’   ‘~/tmp/scratch/xvfb-run.BgGlUB’ ‘~/tmp/scratch/xvfb-run.CZrpR0’   ‘~/tmp/scratch/xvfb-run.DVnz0g’ ‘~/tmp/scratch/xvfb-run.Da0tmx’   ‘~/tmp/scratch/xvfb-run.FyktOK’ ‘~/tmp/scratch/xvfb-run.GMM0sT’   ‘~/tmp/scratch/xvfb-run.IhP4KG’ ‘~/tmp/scratch/xvfb-run.JpOMCE’   ‘~/tmp/scratch/xvfb-run.Lj4aMa’ ‘~/tmp/scratch/xvfb-run.OBLEzT’   ‘~/tmp/scratch/xvfb-run.OC7ADA’ ‘~/tmp/scratch/xvfb-run.Q5zDuq’   ‘~/tmp/scratch/xvfb-run.Q6pRIk’ ‘~/tmp/scratch/xvfb-run.QM8k8y’   ‘~/tmp/scratch/xvfb-run.Rfi6Tz’ ‘~/tmp/scratch/xvfb-run.TDElyK’   ‘~/tmp/scratch/xvfb-run.Ui3AVB’ ‘~/tmp/scratch/xvfb-run.VAuqfo’   ‘~/tmp/scratch/xvfb-run.VUtORe’ ‘~/tmp/scratch/xvfb-run.ViHYuD’   ‘~/tmp/scratch/xvfb-run.WaJ7xW’ ‘~/tmp/scratch/xvfb-run.XTiAd5’   ‘~/tmp/scratch/xvfb-run.XxA2Cs’ ‘~/tmp/scratch/xvfb-run.ZPPfyF’   ‘~/tmp/scratch/xvfb-run.ZPgTi9’ ‘~/tmp/scratch/xvfb-run.ZURkDT’   ‘~/tmp/scratch/xvfb-run.aKQPDb’ ‘~/tmp/scratch/xvfb-run.bk0Fim’   ‘~/tmp/scratch/xvfb-run.fJTwFg’ ‘~/tmp/scratch/xvfb-run.hlkx0G’   ‘~/tmp/scratch/xvfb-run.jg7xJm’ ‘~/tmp/scratch/xvfb-run.lSMU4k’   ‘~/tmp/scratch/xvfb-run.q0QV3n’ ‘~/tmp/scratch/xvfb-run.qzF9Vw’   ‘~/tmp/scratch/xvfb-run.tAR70j’ ‘~/tmp/scratch/xvfb-run.ufkUW5’   ‘~/tmp/scratch/xvfb-run.ujnHcy’ ‘~/tmp/scratch/xvfb-run.vND3kX’   ‘~/tmp/scratch/xvfb-run.vYfvL0’ ‘~/tmp/scratch/xvfb-run.xQ9KrG’   ‘~/tmp/scratch/xvfb-run.xzrrgJ’ ‘~/tmp/scratch/xvfb-run.ygdckZ’
• DONE

Status: 2 NOTEs