• using R Under development (unstable) (2026-08-01 r90334)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-02 13:47:42 UTC
• checking for file ‘cancerGI/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘cancerGI’ version ‘1.0.1’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = c("Audrey", "Qiuyan"),                       family = "Fu",                       role = "aut"),                person(given = "Xiaoyue",                       family = "Wang",                       role = "aut"),                person(given = c("Audrey", "Q."),                       family = "Fu",                       role = "cre",                       email = "audreyqyfu@gmail.com")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cancerGI’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the package can be unloaded cleanly ... [2s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [12s/15s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [7s/8s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp09Yg8h’ ‘~/tmp/scratch/Rtmp0NfGu4’   ‘~/tmp/scratch/Rtmp1vmULt’ ‘~/tmp/scratch/Rtmp2DUL6c’   ‘~/tmp/scratch/Rtmp2So2zK’ ‘~/tmp/scratch/Rtmp2VxM5n’   ‘~/tmp/scratch/Rtmp2ZNmQW’ ‘~/tmp/scratch/Rtmp2aaTOr’   ‘~/tmp/scratch/Rtmp3Kgcxm’ ‘~/tmp/scratch/Rtmp3a6AKk’   ‘~/tmp/scratch/Rtmp44wzzk’ ‘~/tmp/scratch/Rtmp4ME41Q’   ‘~/tmp/scratch/Rtmp4UVf0N’ ‘~/tmp/scratch/Rtmp4wjRXa’   ‘~/tmp/scratch/Rtmp5nE6fv’ ‘~/tmp/scratch/Rtmp5sUqtq’   ‘~/tmp/scratch/Rtmp5tlVNO’ ‘~/tmp/scratch/Rtmp5wGiee’   ‘~/tmp/scratch/Rtmp6hy2Gx’ ‘~/tmp/scratch/Rtmp7GPDiL’   ‘~/tmp/scratch/Rtmp7J9KHX’ ‘~/tmp/scratch/Rtmp8bPOhk’   ‘~/tmp/scratch/Rtmp91RZvL’ ‘~/tmp/scratch/Rtmp9FLEjo’   ‘~/tmp/scratch/Rtmp9KUpZx’ ‘~/tmp/scratch/Rtmp9LaHQp’   ‘~/tmp/scratch/RtmpAczbks’ ‘~/tmp/scratch/RtmpAlqGit’   ‘~/tmp/scratch/RtmpApDLKw’ ‘~/tmp/scratch/RtmpB3yIQh’   ‘~/tmp/scratch/RtmpB8swx1’ ‘~/tmp/scratch/RtmpBZwg8h’   ‘~/tmp/scratch/RtmpBuZliP’ ‘~/tmp/scratch/RtmpC6pHhI’   ‘~/tmp/scratch/RtmpCxtnJf’ ‘~/tmp/scratch/RtmpD2vSdM’   ‘~/tmp/scratch/RtmpDKvnsF’ ‘~/tmp/scratch/RtmpDexe6G’   ‘~/tmp/scratch/RtmpDqFI8u’ ‘~/tmp/scratch/RtmpDqK3Lx’   ‘~/tmp/scratch/RtmpEaimxC’ ‘~/tmp/scratch/RtmpF7rI8q’   ‘~/tmp/scratch/RtmpFAAlsh’ ‘~/tmp/scratch/RtmpFAIRYO’   ‘~/tmp/scratch/RtmpFdyTWa’ ‘~/tmp/scratch/RtmpFqWWoB’   ‘~/tmp/scratch/RtmpG2kvoJ’ ‘~/tmp/scratch/RtmpG5mk3q’   ‘~/tmp/scratch/RtmpGqQ4pt’ ‘~/tmp/scratch/RtmpH9zDoV’   ‘~/tmp/scratch/RtmpHQ4etQ’ ‘~/tmp/scratch/RtmpHXXpaq’   ‘~/tmp/scratch/RtmpHkh8e3’ ‘~/tmp/scratch/RtmpHux3w5’   ‘~/tmp/scratch/RtmpHz9lYV’ ‘~/tmp/scratch/RtmpJ5H5FH’   ‘~/tmp/scratch/RtmpJQRT9T’ ‘~/tmp/scratch/RtmpJWZBAg’   ‘~/tmp/scratch/RtmpJhnaBL’ ‘~/tmp/scratch/RtmpJkDe8R’   ‘~/tmp/scratch/RtmpJm03Tc’ ‘~/tmp/scratch/RtmpKFrqjY’   ‘~/tmp/scratch/RtmpLXNs6u’ ‘~/tmp/scratch/RtmpLft25q’   ‘~/tmp/scratch/RtmpM7Rjd9’ ‘~/tmp/scratch/RtmpMhb9JG’   ‘~/tmp/scratch/RtmpMvebHu’ ‘~/tmp/scratch/RtmpNUwLXD’   ‘~/tmp/scratch/RtmpNqLaKo’ ‘~/tmp/scratch/RtmpOqADGz’   ‘~/tmp/scratch/RtmpP4C20P’ ‘~/tmp/scratch/RtmpP819GP’   ‘~/tmp/scratch/RtmpP9XivH’ ‘~/tmp/scratch/RtmpPE4910’   ‘~/tmp/scratch/RtmpPdEEYf’ ‘~/tmp/scratch/RtmpQQ3lFw’   ‘~/tmp/scratch/RtmpRNZ9m0’ ‘~/tmp/scratch/RtmpReD16p’   ‘~/tmp/scratch/RtmpRpoK1B’ ‘~/tmp/scratch/RtmpSQrYkF’   ‘~/tmp/scratch/RtmpTHiL3Z’ ‘~/tmp/scratch/RtmpTRjbAK’   ‘~/tmp/scratch/RtmpTcxxvJ’ ‘~/tmp/scratch/RtmpU922o5’   ‘~/tmp/scratch/RtmpUHBXiZ’ ‘~/tmp/scratch/RtmpUna4us’   ‘~/tmp/scratch/RtmpVeX4fh’ ‘~/tmp/scratch/RtmpWP25oe’   ‘~/tmp/scratch/RtmpWwqYkr’ ‘~/tmp/scratch/RtmpX7Xbeb’   ‘~/tmp/scratch/RtmpXHvecV’ ‘~/tmp/scratch/RtmpXihX8F’   ‘~/tmp/scratch/RtmpXrbqwD’ ‘~/tmp/scratch/RtmpY9qJSJ’   ‘~/tmp/scratch/RtmpYMUuFO’ ‘~/tmp/scratch/RtmpZmSlwt’   ‘~/tmp/scratch/RtmpaE52YP’ ‘~/tmp/scratch/RtmpaOgzqz’   ‘~/tmp/scratch/RtmpaTKuNu’ ‘~/tmp/scratch/RtmpaUSAH0’   ‘~/tmp/scratch/RtmpaarCQL’ ‘~/tmp/scratch/RtmpbaiSMH’   ‘~/tmp/scratch/RtmpeXkV55’ ‘~/tmp/scratch/RtmpeXu3Lc’   ‘~/tmp/scratch/RtmpemC0ob’ ‘~/tmp/scratch/RtmpfpBMhY’   ‘~/tmp/scratch/RtmpgBsl6K’ ‘~/tmp/scratch/RtmpgUFYjX’   ‘~/tmp/scratch/RtmphJ4bya’ ‘~/tmp/scratch/Rtmpi0mPw2’   ‘~/tmp/scratch/RtmpiM8Ria’ ‘~/tmp/scratch/RtmpimUdby’   ‘~/tmp/scratch/Rtmpiq5prg’ ‘~/tmp/scratch/RtmpirDj93’   ‘~/tmp/scratch/RtmpjdET7s’ ‘~/tmp/scratch/RtmpkNXQ2A’   ‘~/tmp/scratch/Rtmpl8t5Q9’ ‘~/tmp/scratch/RtmpmEr2IR’   ‘~/tmp/scratch/RtmpmdhKin’ ‘~/tmp/scratch/RtmpmfdEan’   ‘~/tmp/scratch/Rtmpmrpzr1’ ‘~/tmp/scratch/RtmpmtDTjn’   ‘~/tmp/scratch/RtmpnKwG6T’ ‘~/tmp/scratch/Rtmpnk4LZ5’   ‘~/tmp/scratch/RtmpoHSySz’ ‘~/tmp/scratch/RtmpoJerx9’   ‘~/tmp/scratch/RtmpodtqCF’ ‘~/tmp/scratch/RtmposNoOb’   ‘~/tmp/scratch/Rtmpp4OXQ8’ ‘~/tmp/scratch/RtmppisZKi’   ‘~/tmp/scratch/RtmppwBoSS’ ‘~/tmp/scratch/RtmpqiC8t2’   ‘~/tmp/scratch/RtmpqpR6GU’ ‘~/tmp/scratch/RtmptgQ0BG’   ‘~/tmp/scratch/Rtmpu4dpwo’ ‘~/tmp/scratch/RtmpuGqqXo’   ‘~/tmp/scratch/Rtmpufy9CQ’ ‘~/tmp/scratch/Rtmpv86qcL’   ‘~/tmp/scratch/RtmpvE6kNv’ ‘~/tmp/scratch/RtmpvEGzyk’   ‘~/tmp/scratch/RtmpvexNGU’ ‘~/tmp/scratch/RtmpwTu64p’   ‘~/tmp/scratch/Rtmpx0fDP1’ ‘~/tmp/scratch/RtmpxoeqHc’   ‘~/tmp/scratch/Rtmpxv5RCc’ ‘~/tmp/scratch/RtmpzMw3Ks’   ‘~/tmp/scratch/RtmpzcGn0b’ ‘~/tmp/scratch/ccyf1M0b.s’   ‘~/tmp/scratch/xvfb-run.0DN3FM’ ‘~/tmp/scratch/xvfb-run.0jjaQe’   ‘~/tmp/scratch/xvfb-run.0l8Rpd’ ‘~/tmp/scratch/xvfb-run.0lzRSB’   ‘~/tmp/scratch/xvfb-run.1joCR5’ ‘~/tmp/scratch/xvfb-run.28sUGR’   ‘~/tmp/scratch/xvfb-run.2HaxpL’ ‘~/tmp/scratch/xvfb-run.3iQXJU’   ‘~/tmp/scratch/xvfb-run.4zwXFO’ ‘~/tmp/scratch/xvfb-run.5IQdSB’   ‘~/tmp/scratch/xvfb-run.ARvLDB’ ‘~/tmp/scratch/xvfb-run.CY3kn5’   ‘~/tmp/scratch/xvfb-run.Fs2LD6’ ‘~/tmp/scratch/xvfb-run.G3JQ0X’   ‘~/tmp/scratch/xvfb-run.H0k0J7’ ‘~/tmp/scratch/xvfb-run.HJJuBX’   ‘~/tmp/scratch/xvfb-run.HsiDLx’ ‘~/tmp/scratch/xvfb-run.LBub0l’   ‘~/tmp/scratch/xvfb-run.Ln9JVu’ ‘~/tmp/scratch/xvfb-run.Lq5EKJ’   ‘~/tmp/scratch/xvfb-run.LqXDdQ’ ‘~/tmp/scratch/xvfb-run.MCKKBi’   ‘~/tmp/scratch/xvfb-run.N77Zzz’ ‘~/tmp/scratch/xvfb-run.NJ7r40’   ‘~/tmp/scratch/xvfb-run.OQX59m’ ‘~/tmp/scratch/xvfb-run.OxfxfK’   ‘~/tmp/scratch/xvfb-run.PuBvZ7’ ‘~/tmp/scratch/xvfb-run.R9n2Ay’   ‘~/tmp/scratch/xvfb-run.SsQKB1’ ‘~/tmp/scratch/xvfb-run.TZIx0O’   ‘~/tmp/scratch/xvfb-run.U3qO11’ ‘~/tmp/scratch/xvfb-run.XkKFCD’   ‘~/tmp/scratch/xvfb-run.a8k9Xp’ ‘~/tmp/scratch/xvfb-run.aKdqvR’   ‘~/tmp/scratch/xvfb-run.aLnrPd’ ‘~/tmp/scratch/xvfb-run.bQB3EW’   ‘~/tmp/scratch/xvfb-run.biHiiI’ ‘~/tmp/scratch/xvfb-run.cWEiHc’   ‘~/tmp/scratch/xvfb-run.clOBwO’ ‘~/tmp/scratch/xvfb-run.epJ4w7’   ‘~/tmp/scratch/xvfb-run.f8Yo08’ ‘~/tmp/scratch/xvfb-run.fsL9lz’   ‘~/tmp/scratch/xvfb-run.gumH9o’ ‘~/tmp/scratch/xvfb-run.hWNrSn’   ‘~/tmp/scratch/xvfb-run.hvpX3q’ ‘~/tmp/scratch/xvfb-run.ikSam6’   ‘~/tmp/scratch/xvfb-run.kQz48F’ ‘~/tmp/scratch/xvfb-run.mBQsxb’   ‘~/tmp/scratch/xvfb-run.nS2Suz’ ‘~/tmp/scratch/xvfb-run.oJeqxP’   ‘~/tmp/scratch/xvfb-run.qqRTlC’ ‘~/tmp/scratch/xvfb-run.rDFMiN’   ‘~/tmp/scratch/xvfb-run.sx7poF’ ‘~/tmp/scratch/xvfb-run.tJTmwl’   ‘~/tmp/scratch/xvfb-run.wX9sCA’
• DONE

Status: 2 NOTEs