* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘bayestransmission’ ...
** this is package ‘bayestransmission’ version ‘0.1.0’
** package ‘bayestransmission’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’
using C++17
make[1]: Entering directory '/tmp/RtmpHZZhQq/R.INSTALL3ea9d7a9f38f5/bayestransmission/src'
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CodeToEvent.cpp -o CodeToEvent.o
In file included from infect/../util/util.h:15,
from infect/infect.h:16,
from CodeToEvent.cpp:1:
infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_AbxCoding.cpp -o infect/infect_AbxCoding.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_AbxCoding.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_AbxLocationState.cpp -o infect/infect_AbxLocationState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_AbxLocationState.cpp:2:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_AbxPatientState.cpp -o infect/infect_AbxPatientState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_AbxPatientState.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_CountLocationState.cpp -o infect/infect_CountLocationState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_CountLocationState.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Episode.cpp -o infect/infect_Episode.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Episode.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_EpisodeHistory.cpp -o infect/infect_EpisodeHistory.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_EpisodeHistory.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Event.cpp -o infect/infect_Event.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Event.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Facility.cpp -o infect/infect_Facility.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Facility.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_HistoryLink.cpp -o infect/infect_HistoryLink.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_HistoryLink.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_LocationState.cpp -o infect/infect_LocationState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_LocationState.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Model.cpp -o infect/infect_Model.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Model.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Patient.cpp -o infect/infect_Patient.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Patient.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_PatientState.cpp -o infect/infect_PatientState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_PatientState.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_RawEvent.cpp -o infect/infect_RawEvent.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_RawEvent.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_Sampler.cpp -o infect/infect_Sampler.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_Sampler.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_SetLocationState.cpp -o infect/infect_SetLocationState.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_SetLocationState.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_State.cpp -o infect/infect_State.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_State.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_System.cpp -o infect/infect_System.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_System.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_SystemEpisodeHistory.cpp -o infect/infect_SystemEpisodeHistory.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_SystemEpisodeHistory.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_SystemHistory.cpp -o infect/infect_SystemHistory.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_SystemHistory.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c infect/infect_UnitEpisodeHistory.cpp -o infect/infect_UnitEpisodeHistory.o
In file included from ./infect/../util/util.h:15,
from ./infect/infect.h:16,
from infect/infect_UnitEpisodeHistory.cpp:1:
./infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LinearAbxICP2.cpp -o lognormal/lognormal_LinearAbxICP2.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LinearAbxICP2.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LinearAbxICP.cpp -o lognormal/lognormal_LinearAbxICP.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LinearAbxICP.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LinearAbxModel2.cpp -o lognormal/lognormal_LinearAbxModel2.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LinearAbxModel2.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LinearAbxModel.cpp -o lognormal/lognormal_LinearAbxModel.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LinearAbxModel.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LogNormalAbxICP.cpp -o lognormal/lognormal_LogNormalAbxICP.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LogNormalAbxICP.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LogNormalICP.cpp -o lognormal/lognormal_LogNormalICP.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LogNormalICP.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LogNormalMassAct.cpp -o lognormal/lognormal_LogNormalMassAct.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LogNormalMassAct.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_LogNormalModel.cpp -o lognormal/lognormal_LogNormalModel.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_LogNormalModel.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_MixedICP.cpp -o lognormal/lognormal_MixedICP.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_MixedICP.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lognormal/lognormal_MultiUnitAbxICP.cpp -o lognormal/lognormal_MultiUnitAbxICP.o
In file included from ./lognormal/../util/util.h:15,
from ./lognormal/lognormal.h:16,
from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
./lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./lognormal/../infect/infect.h:29,
from ./lognormal/lognormal.h:17:
./lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./lognormal/../modeling/modeling.h:20,
from ./lognormal/lognormal.h:18:
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:21:
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
./lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./lognormal/../modeling/modeling.h:23:
./lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Markov.cpp -o Markov.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/modeling_Parameters.cpp -o modeling/modeling_Parameters.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/modeling_Parameters.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/modeling_TestParams.cpp -o modeling/modeling_TestParams.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/modeling_TestParams.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_AbxParams.cpp -o modeling/models_AbxParams.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_AbxParams.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_ConstrainedSimulator.cpp -o modeling/models_ConstrainedSimulator.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_ConstrainedSimulator.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_DummyModel.cpp -o modeling/models_DummyModel.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_DummyModel.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_ForwardSimulator.cpp -o modeling/models_ForwardSimulator.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_ForwardSimulator.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_InsituParams.cpp -o modeling/models_InsituParams.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_InsituParams.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_MassActionICP.cpp -o modeling/models_MassActionICP.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_MassActionICP.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_MassActionModel.cpp -o modeling/models_MassActionModel.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_MassActionModel.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_Options.cpp -o modeling/models_Options.o
In file included from ./modeling/../infect/../util/util.h:15,
from ./modeling/../infect/infect.h:16,
from ./modeling/Options.h:4,
from modeling/models_Options.cpp:1:
./modeling/../infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_OutColParams.cpp -o modeling/models_OutColParams.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_OutColParams.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_RandomTestParams.cpp -o modeling/models_RandomTestParams.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_RandomTestParams.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_TestParamsAbx.cpp -o modeling/models_TestParamsAbx.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_TestParamsAbx.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c modeling/models_UnitLinkedModel.cpp -o modeling/models_UnitLinkedModel.o
In file included from ./modeling/../util/util.h:15,
from ./modeling/modeling.h:15,
from modeling/models_UnitLinkedModel.cpp:1:
./modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from ./modeling/../infect/infect.h:29,
from ./modeling/modeling.h:16:
./modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from ./modeling/modeling.h:20:
./modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
./modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
./modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
./modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
./modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module.cpp -o Module.o
In file included from infect/../util/util.h:15,
from infect/infect.h:16,
from Module.cpp:1:
infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from lognormal/../modeling/modeling.h:20,
from lognormal/lognormal.h:18,
from Module.cpp:4:
lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from lognormal/../modeling/modeling.h:21:
lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from lognormal/../modeling/modeling.h:23:
lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module-Infect.cpp -o Module-Infect.o
In file included from infect/../util/util.h:15,
from infect/infect.h:16,
from Module-Infect.cpp:1:
infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20,
from wrap.h:9,
from Module-Infect.cpp:4:
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module-Infect-System.cpp -o Module-Infect-System.o
In file included from infect/../util/util.h:15,
from infect/infect.h:16,
from Module-Infect-System.cpp:1:
infect/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20,
from wrap.h:9,
from Module-Infect-System.cpp:4:
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module-lognormal.cpp -o Module-lognormal.o
In file included from lognormal/../util/util.h:15,
from lognormal/lognormal.h:16,
from Module-lognormal.cpp:2:
lognormal/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from lognormal/../infect/infect.h:29,
from lognormal/lognormal.h:17:
lognormal/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from lognormal/../modeling/modeling.h:20,
from lognormal/lognormal.h:18:
lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from lognormal/../modeling/modeling.h:21:
lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
lognormal/../modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
lognormal/../modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
lognormal/../modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
lognormal/../modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
lognormal/../modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from lognormal/../modeling/modeling.h:23:
lognormal/../modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module-models.cpp -o Module-models.o
In file included from modeling/../util/util.h:15,
from modeling/modeling.h:15,
from Module-models.cpp:2:
modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from modeling/../infect/infect.h:29,
from modeling/modeling.h:16:
modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20:
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Module-utils.cpp -o Module-utils.o
In file included from modeling/../util/util.h:15,
from modeling/modeling.h:15,
from Module-utils.cpp:2:
modeling/../util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from modeling/../infect/infect.h:29,
from modeling/modeling.h:16:
modeling/../infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20:
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Random.cpp -o Random.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RRandom.cpp -o RRandom.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c runMCMC.cpp -o runMCMC.o
In file included from util/util.h:15,
from runMCMC.cpp:5:
util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29,
from runMCMC.cpp:6:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20,
from runMCMC.cpp:7:
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util/util.cc -o util/util.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util/util_Integer.cpp -o util/util_Integer.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util/util_List.cpp -o util/util_List.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util/util_Object.cpp -o util/util_Object.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util/util_Vector.cpp -o util/util_Vector.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wrap.cpp -o wrap.o
In file included from util/util.h:15,
from wrap.h:7,
from wrap.cpp:1:
util/Object.h:25:21: warning: ‘virtual int util::Object::compare(util::Object*)’ was hidden [-Woverloaded-virtual=]
25 | virtual int compare(Object *y);
| ^~~~~~~
In file included from infect/infect.h:29,
from wrap.h:8:
infect/RawEvent.h:23:13: note: by ‘int infect::RawEvent::compare(const util::Object*) const’
23 | int compare (Object const * const e) const;
| ^~~~~~~
In file included from modeling/modeling.h:20,
from wrap.h:9:
modeling/TestParams.h:54:22: warning: ‘virtual void models::TestParams::set(int, double, int, double, double)’ was hidden [-Woverloaded-virtual=]
54 | virtual void set(int i, double value, int update, double prival, double prin);
| ^~~
In file included from modeling/modeling.h:21:
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
modeling/TestParamsAbx.h:27:22: note: by ‘virtual void models::TestParamsAbx::set(int, int, double)’
27 | virtual void set(int i, int j, double value)
| ^~~
modeling/TestParams.h:45:24: warning: ‘virtual double models::TestParams::logProb(infect::HistoryLink*)’ was hidden [-Woverloaded-virtual=]
45 | virtual double logProb(infect::HistoryLink *h) override;
| ^~~~~~~
modeling/TestParamsAbx.h:49:24: note: by ‘virtual double models::TestParamsAbx::logProb(infect::HistoryLink*) const’
49 | virtual double logProb(infect::HistoryLink *const h) const;
| ^~~~~~~
modeling/TestParams.h:26:22: warning: ‘virtual void models::TestParams::set(int, double)’ was hidden [-Woverloaded-virtual=]
26 | virtual void set(int i, double value)
| ^~~
In file included from modeling/modeling.h:23:
modeling/RandomTestParams.h:56:22: note: by ‘virtual void models::RandomTestParams::set(int, double, int, double, double)’
56 | virtual void set(int i, double value, int update, double prival, double prin) override;
| ^~~
g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bayestransmission.so CodeToEvent.o infect/infect_AbxCoding.o infect/infect_AbxLocationState.o infect/infect_AbxPatientState.o infect/infect_CountLocationState.o infect/infect_Episode.o infect/infect_EpisodeHistory.o infect/infect_Event.o infect/infect_Facility.o infect/infect_HistoryLink.o infect/infect_LocationState.o infect/infect_Model.o infect/infect_Patient.o infect/infect_PatientState.o infect/infect_RawEvent.o infect/infect_Sampler.o infect/infect_SetLocationState.o infect/infect_State.o infect/infect_System.o infect/infect_SystemEpisodeHistory.o infect/infect_SystemHistory.o infect/infect_UnitEpisodeHistory.o lognormal/lognormal_LinearAbxICP2.o lognormal/lognormal_LinearAbxICP.o lognormal/lognormal_LinearAbxModel2.o lognormal/lognormal_LinearAbxModel.o lognormal/lognormal_LogNormalAbxICP.o lognormal/lognormal_LogNormalICP.o lognormal/lognormal_LogNormalMassAct.o lognormal/lognormal_LogNormalModel.o lognormal/lognormal_MixedICP.o lognormal/lognormal_MultiUnitAbxICP.o Markov.o modeling/modeling_Parameters.o modeling/modeling_TestParams.o modeling/models_AbxParams.o modeling/models_ConstrainedSimulator.o modeling/models_DummyModel.o modeling/models_ForwardSimulator.o modeling/models_InsituParams.o modeling/models_MassActionICP.o modeling/models_MassActionModel.o modeling/models_Options.o modeling/models_OutColParams.o modeling/models_RandomTestParams.o modeling/models_TestParamsAbx.o modeling/models_UnitLinkedModel.o Module.o Module-Infect.o Module-Infect-System.o Module-lognormal.o Module-models.o Module-utils.o Random.o RcppExports.o RRandom.o runMCMC.o util/util.o util/util_Integer.o util/util_List.o util/util_Object.o util/util_Vector.o wrap.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lstdc++ -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpHZZhQq/R.INSTALL3ea9d7a9f38f5/bayestransmission/src'
make[1]: Entering directory '/tmp/RtmpHZZhQq/R.INSTALL3ea9d7a9f38f5/bayestransmission/src'
make[1]: Leaving directory '/tmp/RtmpHZZhQq/R.INSTALL3ea9d7a9f38f5/bayestransmission/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-bayestransmission/00new/bayestransmission/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bayestransmission)