* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘bayesEO’ ...
** this is package ‘bayesEO’ version ‘0.2.1’
** package ‘bayesEO’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-15 (Debian 15.2.0-2) 15.2.0’
make[1]: Entering directory '/tmp/RtmpxZwvNW/R.INSTALL218f8664856c61/bayesEO/src'
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
from RcppExports.cpp:4:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c bayes_smooth.cpp -o bayes_smooth.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
from bayes_smooth.cpp:1:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
bayes_smooth.cpp: In function ‘void neigh_vec(neigh_t&, const arma::mat&, arma::uword, arma::uword, const arma::mat&, arma::uword, arma::uword, arma::uword)’:
bayes_smooth.cpp:101:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
101 | for (arma::uword j = 0; j < w.n_cols; ++j)
| ^~~
bayes_smooth.cpp:112:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
112 | n.n_rows = k;
| ^
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c label_class.cpp -o label_class.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
from label_class.cpp:1:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c other_smoothers.cpp -o other_smoothers.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
from other_smoothers.cpp:1:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
other_smoothers.cpp: In function ‘void neigh_vec_gauss(neigh_gauss_t&, const arma::mat&, arma::uword, arma::uword, const arma::mat&, arma::uword, arma::uword, arma::uword)’:
other_smoothers.cpp:32:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
32 | for (arma::uword j = 0; j < w.n_cols; ++j)
| ^~~
other_smoothers.cpp:42:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
42 | n.n_rows = k;
| ^
other_smoothers.cpp: In function ‘arma::mat kernel_smoother(const arma::mat&, arma::uword, arma::uword, const arma::mat&, bool)’:
other_smoothers.cpp:73:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
73 | for (arma::uword i = 0; i < m_nrow; ++i)
| ^~~
other_smoothers.cpp:91:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
91 | return res;
| ^~~~~~
other_smoothers.cpp: In function ‘arma::mat bilateral_smoother(const arma::mat&, arma::uword, arma::uword, const arma::mat&, double)’:
other_smoothers.cpp:110:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
110 | for (arma::uword i = 0; i < m_nrow; ++i)
| ^~~
other_smoothers.cpp:131:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
131 | return res;
| ^~~~~~
g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bayesEO.so RcppExports.o bayes_smooth.o label_class.o other_smoothers.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpxZwvNW/R.INSTALL218f8664856c61/bayesEO/src'
make[1]: Entering directory '/tmp/RtmpxZwvNW/R.INSTALL218f8664856c61/bayesEO/src'
make[1]: Leaving directory '/tmp/RtmpxZwvNW/R.INSTALL218f8664856c61/bayesEO/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-bayesEO/00new/bayesEO/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bayesEO)