Install log for 'bamp'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘bamp’ ...
** this is package ‘bamp’ version ‘2.1.3’
** package ‘bamp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-16 (Debian 16-20260425-1) 16.0.1 20260425 (prerelease) [gcc-16 r16-8812-gd9c07462a22]’
using C++ compiler: ‘g++-16 (Debian 16-20260425-1) 16.0.1 20260425 (prerelease) [gcc-16 r16-8812-gd9c07462a22]’
make[1]: Entering directory '/tmp/Rtmp02WUSO/R.INSTALL166aa14991e252/bamp/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c bamp.cc -o bamp.o
bamp.cc: In function ‘void bamp(int*, int*, int*, int*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*)’:
bamp.cc:71:5: warning: variable ‘tuningcount’ set but not used [-Wunused-but-set-variable=]
   71 | int tuningcount=0;
      |     ^~~~~~~~~~~
bamp.cc:277:5: warning: variable ‘index’ set but not used [-Wunused-but-set-variable=]
  277 | int index=0;
      |     ^~~~~
bamp.cc:424:42: warning: ‘period_data’ may be used uninitialized [-Wmaybe-uninitialized]
  424 |               phi[i]=phi[i]/period_data[i];
      |                             ~~~~~~~~~~~~~^
bamp.cc:69:9: note: ‘period_data’ was declared here
   69 | double* period_data;
      |         ^~~~~~~~~~~
bamp.cc:431:42: warning: ‘cohort_data’ may be used uninitialized [-Wmaybe-uninitialized]
  431 |               psi[i]=psi[i]/cohort_data[i];
      |                             ~~~~~~~~~~~~~^
bamp.cc:70:9: note: ‘cohort_data’ was declared here
   70 | double* cohort_data;
      |         ^~~~~~~~~~~
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c block.cc -o block.o
block.cc: In function ‘void blockupdate_a2(int, int, double, double, double, int, int, double**, double&, double*, double*, double*, double*, double*, int)’:
block.cc:2524:10: warning: variable ‘sum’ set but not used [-Wunused-but-set-variable=]
 2524 |   double sum=0;
      |          ^~~
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c l.cc -o l.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matrix.cc -o matrix.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mxs.cc -o mxs.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c praez.cc -o praez.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c update_my.cc -o update_my.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c zufall.cc -o zufall.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c zz_ksi.cc -o zz_ksi.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o bamp.so bamp.o block.o init.o l.o matrix.o mxs.o praez.o update_my.o zufall.o zz_ksi.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp02WUSO/R.INSTALL166aa14991e252/bamp/src'
make[1]: Entering directory '/tmp/Rtmp02WUSO/R.INSTALL166aa14991e252/bamp/src'
make[1]: Leaving directory '/tmp/Rtmp02WUSO/R.INSTALL166aa14991e252/bamp/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-bamp/00new/bamp/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bamp)