• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 13:20:16 UTC
• checking for file ‘admixr/DESCRIPTION’ ... OK
• this is package ‘admixr’ version ‘0.9.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘admixr’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/8s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [2s/3s] OK   Running ‘testthat.R’ [2s/2s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/6s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0ZE4R9’ ‘~/tmp/scratch/Rtmp1L9Ht5’   ‘~/tmp/scratch/Rtmp1pCtyp’ ‘~/tmp/scratch/Rtmp1xf42Z’   ‘~/tmp/scratch/Rtmp2PL7n4’ ‘~/tmp/scratch/Rtmp30msEA’   ‘~/tmp/scratch/Rtmp364olq’ ‘~/tmp/scratch/Rtmp3BK8DX’   ‘~/tmp/scratch/Rtmp3NzCU3’ ‘~/tmp/scratch/Rtmp4HGcq1’   ‘~/tmp/scratch/Rtmp4qW15f’ ‘~/tmp/scratch/Rtmp50EqeP’   ‘~/tmp/scratch/Rtmp6LLprv’ ‘~/tmp/scratch/Rtmp85uDaq’   ‘~/tmp/scratch/Rtmp87XRBg’ ‘~/tmp/scratch/Rtmp8kvGFI’   ‘~/tmp/scratch/Rtmp9H3vW4’ ‘~/tmp/scratch/Rtmp9nbXVK’   ‘~/tmp/scratch/RtmpADR1RT’ ‘~/tmp/scratch/RtmpAKQwGs’   ‘~/tmp/scratch/RtmpAbSQop’ ‘~/tmp/scratch/RtmpBvcw4X’   ‘~/tmp/scratch/RtmpCGE1VE’ ‘~/tmp/scratch/RtmpDWEEXX’   ‘~/tmp/scratch/RtmpDYgGZi’ ‘~/tmp/scratch/RtmpDjVhhD’   ‘~/tmp/scratch/RtmpEBx55B’ ‘~/tmp/scratch/RtmpElWiJy’   ‘~/tmp/scratch/RtmpEpjI4x’ ‘~/tmp/scratch/RtmpFYUuqw’   ‘~/tmp/scratch/RtmpGEd2aD’ ‘~/tmp/scratch/RtmpHL8mHT’   ‘~/tmp/scratch/RtmpHLnnXr’ ‘~/tmp/scratch/RtmpJXupjs’   ‘~/tmp/scratch/RtmpJhnV5w’ ‘~/tmp/scratch/RtmpJtPPRa’   ‘~/tmp/scratch/RtmpKMJXv4’ ‘~/tmp/scratch/RtmpMCWKqO’   ‘~/tmp/scratch/RtmpMEJ4In’ ‘~/tmp/scratch/RtmpMZVm2W’   ‘~/tmp/scratch/RtmpMglmcS’ ‘~/tmp/scratch/RtmpMp0tlX’   ‘~/tmp/scratch/RtmpOaERki’ ‘~/tmp/scratch/RtmpOcS6lT’   ‘~/tmp/scratch/RtmpQMaIBj’ ‘~/tmp/scratch/RtmpQi3IYj’   ‘~/tmp/scratch/RtmpQiGU9e’ ‘~/tmp/scratch/RtmpQthC8F’   ‘~/tmp/scratch/RtmpR0TlR2’ ‘~/tmp/scratch/RtmpSMmqfc’   ‘~/tmp/scratch/RtmpSVohYl’ ‘~/tmp/scratch/RtmpSfDSyg’   ‘~/tmp/scratch/RtmpSwlxof’ ‘~/tmp/scratch/RtmpTgBcnY’   ‘~/tmp/scratch/RtmpU2P1nM’ ‘~/tmp/scratch/RtmpVNFTg2’   ‘~/tmp/scratch/RtmpVhDt5V’ ‘~/tmp/scratch/RtmpVnK3TA’   ‘~/tmp/scratch/RtmpW75X5l’ ‘~/tmp/scratch/RtmpWWUWGS’   ‘~/tmp/scratch/RtmpWrsK05’ ‘~/tmp/scratch/RtmpXk9DGY’   ‘~/tmp/scratch/RtmpYbKDRR’ ‘~/tmp/scratch/RtmpZ2QFfD’   ‘~/tmp/scratch/RtmpZ8I12k’ ‘~/tmp/scratch/RtmpZKm4g3’   ‘~/tmp/scratch/RtmpZfXXnz’ ‘~/tmp/scratch/RtmpaJ1bPQ’   ‘~/tmp/scratch/RtmpaMcCUa’ ‘~/tmp/scratch/RtmpaevRGY’   ‘~/tmp/scratch/RtmpazGKTp’ ‘~/tmp/scratch/RtmpbHDb1g’   ‘~/tmp/scratch/RtmpcUv4Eh’ ‘~/tmp/scratch/Rtmpd5uiU2’   ‘~/tmp/scratch/RtmpdAut1k’ ‘~/tmp/scratch/RtmpejOtbU’   ‘~/tmp/scratch/Rtmpg0epew’ ‘~/tmp/scratch/RtmpgG4ryP’   ‘~/tmp/scratch/RtmpgLKXhW’ ‘~/tmp/scratch/RtmphN6XVI’   ‘~/tmp/scratch/RtmphfkmG3’ ‘~/tmp/scratch/RtmpjzaBop’   ‘~/tmp/scratch/RtmpkrXV42’ ‘~/tmp/scratch/Rtmpl9yMe7’   ‘~/tmp/scratch/RtmpliVrNB’ ‘~/tmp/scratch/RtmplvVYpR’   ‘~/tmp/scratch/RtmpmnP2y1’ ‘~/tmp/scratch/Rtmpo1KVoW’   ‘~/tmp/scratch/Rtmpp5PL9B’ ‘~/tmp/scratch/RtmppJOUzB’   ‘~/tmp/scratch/Rtmpsb8SF3’ ‘~/tmp/scratch/RtmpspUE3W’   ‘~/tmp/scratch/Rtmpsr21vY’ ‘~/tmp/scratch/Rtmpt0eMDN’   ‘~/tmp/scratch/RtmptcEZ05’ ‘~/tmp/scratch/RtmpuY4nsA’   ‘~/tmp/scratch/RtmpvaYAKr’ ‘~/tmp/scratch/RtmpwPtxEy’   ‘~/tmp/scratch/RtmpwSCc9Z’ ‘~/tmp/scratch/Rtmpxgt1rn’   ‘~/tmp/scratch/RtmpyIVVyn’ ‘~/tmp/scratch/RtmpyQbRvA’   ‘~/tmp/scratch/Rtmpyez32A’ ‘~/tmp/scratch/Rtmpyx9WdV’   ‘~/tmp/scratch/RtmpzHK4Bj’ ‘~/tmp/scratch/RtmpzP7gan’   ‘~/tmp/scratch/RtmpzcGvbe’ ‘~/tmp/scratch/xvfb-run.1A9lYP’   ‘~/tmp/scratch/xvfb-run.36he1f’ ‘~/tmp/scratch/xvfb-run.52Fcew’   ‘~/tmp/scratch/xvfb-run.5AjgKv’ ‘~/tmp/scratch/xvfb-run.6w0APq’   ‘~/tmp/scratch/xvfb-run.7bLkYD’ ‘~/tmp/scratch/xvfb-run.8WcLKc’   ‘~/tmp/scratch/xvfb-run.AQzjpz’ ‘~/tmp/scratch/xvfb-run.AexhSL’   ‘~/tmp/scratch/xvfb-run.DDedoU’ ‘~/tmp/scratch/xvfb-run.DPi7DT’   ‘~/tmp/scratch/xvfb-run.IYMLMR’ ‘~/tmp/scratch/xvfb-run.KbqVV8’   ‘~/tmp/scratch/xvfb-run.NOTHri’ ‘~/tmp/scratch/xvfb-run.Nz1d04’   ‘~/tmp/scratch/xvfb-run.P1KKwp’ ‘~/tmp/scratch/xvfb-run.WGinlv’   ‘~/tmp/scratch/xvfb-run.ZufBc9’ ‘~/tmp/scratch/xvfb-run.cyPTyW’   ‘~/tmp/scratch/xvfb-run.dPkIfJ’ ‘~/tmp/scratch/xvfb-run.hd6R4A’   ‘~/tmp/scratch/xvfb-run.hoUwfl’ ‘~/tmp/scratch/xvfb-run.ifhYzW’   ‘~/tmp/scratch/xvfb-run.l4DIhm’ ‘~/tmp/scratch/xvfb-run.mNEPjl’   ‘~/tmp/scratch/xvfb-run.nFvOGG’ ‘~/tmp/scratch/xvfb-run.rB6CTZ’   ‘~/tmp/scratch/xvfb-run.shq659’ ‘~/tmp/scratch/xvfb-run.tJl9L6’   ‘~/tmp/scratch/xvfb-run.vw3zeC’ ‘~/tmp/scratch/xvfb-run.xhnWxA’   ‘~/tmp/scratch/xvfb-run.xxLqGZ’ ‘~/tmp/scratch/xvfb-run.yA15ZA’
• DONE

Status: 1 NOTE