• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 13:19:49 UTC
• checking for file ‘admixr/DESCRIPTION’ ... OK
• this is package ‘admixr’ version ‘0.9.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘admixr’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [2s/3s] OK   Running ‘testthat.R’ [2s/2s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/5s] OK
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0GT3vf’ ‘~/tmp/scratch/Rtmp0bzf3a’   ‘~/tmp/scratch/Rtmp0fDv6G’ ‘~/tmp/scratch/Rtmp0hvAPA’   ‘~/tmp/scratch/Rtmp11LZS3’ ‘~/tmp/scratch/Rtmp1PQR9t’   ‘~/tmp/scratch/Rtmp1yD9FR’ ‘~/tmp/scratch/Rtmp26ZDFp’   ‘~/tmp/scratch/Rtmp2QNkjQ’ ‘~/tmp/scratch/Rtmp32m8o0’   ‘~/tmp/scratch/Rtmp3js2vd’ ‘~/tmp/scratch/Rtmp4sGvGn’   ‘~/tmp/scratch/Rtmp4t4rbp’ ‘~/tmp/scratch/Rtmp59XP9d’   ‘~/tmp/scratch/Rtmp5B3gL6’ ‘~/tmp/scratch/Rtmp5Jo3wD’   ‘~/tmp/scratch/Rtmp7ICDf4’ ‘~/tmp/scratch/Rtmp85ECdb’   ‘~/tmp/scratch/Rtmp8YjthG’ ‘~/tmp/scratch/Rtmp8nrNwS’   ‘~/tmp/scratch/Rtmp8u5tem’ ‘~/tmp/scratch/Rtmp9yS3nT’   ‘~/tmp/scratch/RtmpAEG6bo’ ‘~/tmp/scratch/RtmpBXnwMu’   ‘~/tmp/scratch/RtmpBor3c6’ ‘~/tmp/scratch/RtmpCdDS1c’   ‘~/tmp/scratch/RtmpDUKAMS’ ‘~/tmp/scratch/RtmpEFJxmV’   ‘~/tmp/scratch/RtmpF8bvuF’ ‘~/tmp/scratch/RtmpFFbdGL’   ‘~/tmp/scratch/RtmpFim9Km’ ‘~/tmp/scratch/RtmpGl1Upr’   ‘~/tmp/scratch/RtmpGmb48L’ ‘~/tmp/scratch/RtmpGoIMVh’   ‘~/tmp/scratch/RtmpI0cr9n’ ‘~/tmp/scratch/RtmpIRNiM6’   ‘~/tmp/scratch/RtmpIdYLaf’ ‘~/tmp/scratch/RtmpIs5TIn’   ‘~/tmp/scratch/RtmpJEQO1a’ ‘~/tmp/scratch/RtmpJYn6qR’   ‘~/tmp/scratch/RtmpJwSHCI’ ‘~/tmp/scratch/RtmpK0Vm2O’   ‘~/tmp/scratch/RtmpK9JIvF’ ‘~/tmp/scratch/RtmpKboduA’   ‘~/tmp/scratch/RtmpKi0XRn’ ‘~/tmp/scratch/RtmpLoPKAe’   ‘~/tmp/scratch/RtmpMKDn8y’ ‘~/tmp/scratch/RtmpMvQrBQ’   ‘~/tmp/scratch/RtmpMvlfix’ ‘~/tmp/scratch/RtmpNRUYBL’   ‘~/tmp/scratch/RtmpPFSsbJ’ ‘~/tmp/scratch/RtmpR7w43X’   ‘~/tmp/scratch/RtmpS3VQgJ’ ‘~/tmp/scratch/RtmpSoLq4h’   ‘~/tmp/scratch/RtmpTowuE9’ ‘~/tmp/scratch/RtmpUDd3k9’   ‘~/tmp/scratch/RtmpUy6BW8’ ‘~/tmp/scratch/RtmpVgFVjJ’   ‘~/tmp/scratch/RtmpWsKVyk’ ‘~/tmp/scratch/RtmpYLG8vx’   ‘~/tmp/scratch/RtmpYuleEE’ ‘~/tmp/scratch/RtmpZ8qWLC’   ‘~/tmp/scratch/RtmpahGcW0’ ‘~/tmp/scratch/RtmpciGPIW’   ‘~/tmp/scratch/Rtmpd5J6xQ’ ‘~/tmp/scratch/Rtmpd9t2iT’   ‘~/tmp/scratch/RtmpdCayGZ’ ‘~/tmp/scratch/RtmpdZNbuL’   ‘~/tmp/scratch/RtmpeNclQp’ ‘~/tmp/scratch/RtmpeXfvRL’   ‘~/tmp/scratch/Rtmpf69kbP’ ‘~/tmp/scratch/RtmpfEFt7A’   ‘~/tmp/scratch/RtmpfTrgIk’ ‘~/tmp/scratch/RtmpgdRzXB’   ‘~/tmp/scratch/Rtmph01m6u’ ‘~/tmp/scratch/RtmphY1oKq’   ‘~/tmp/scratch/RtmpiKOL12’ ‘~/tmp/scratch/RtmpiX8v5V’   ‘~/tmp/scratch/RtmpjxWDqK’ ‘~/tmp/scratch/RtmpkFwFIj’   ‘~/tmp/scratch/RtmpkqDx6u’ ‘~/tmp/scratch/RtmplFgcMy’   ‘~/tmp/scratch/RtmplfAkNK’ ‘~/tmp/scratch/RtmpmJiERw’   ‘~/tmp/scratch/RtmpnYkCi2’ ‘~/tmp/scratch/RtmpnZjspr’   ‘~/tmp/scratch/RtmpoYdkqJ’ ‘~/tmp/scratch/Rtmpofh9JY’   ‘~/tmp/scratch/RtmpozlU3v’ ‘~/tmp/scratch/RtmpqIDB94’   ‘~/tmp/scratch/RtmpqQwYpR’ ‘~/tmp/scratch/RtmpqWQBvV’   ‘~/tmp/scratch/RtmpqlhurH’ ‘~/tmp/scratch/RtmptLVtOZ’   ‘~/tmp/scratch/RtmptNOnSd’ ‘~/tmp/scratch/RtmptxUVOM’   ‘~/tmp/scratch/Rtmpu7myqQ’ ‘~/tmp/scratch/RtmpucgjOa’   ‘~/tmp/scratch/RtmpwEbPp1’ ‘~/tmp/scratch/Rtmpx8C9yq’   ‘~/tmp/scratch/RtmpxIkHTt’ ‘~/tmp/scratch/Rtmpyewugy’   ‘~/tmp/scratch/Rtmpz7Dmib’ ‘~/tmp/scratch/xvfb-run.0MXUWn’   ‘~/tmp/scratch/xvfb-run.3NiEjX’ ‘~/tmp/scratch/xvfb-run.4O0POU’   ‘~/tmp/scratch/xvfb-run.6xi0e9’ ‘~/tmp/scratch/xvfb-run.8d4Ph2’   ‘~/tmp/scratch/xvfb-run.DcAmnj’ ‘~/tmp/scratch/xvfb-run.FcmjL2’   ‘~/tmp/scratch/xvfb-run.IIXtgn’ ‘~/tmp/scratch/xvfb-run.KUhgWd’   ‘~/tmp/scratch/xvfb-run.Lnm3BN’ ‘~/tmp/scratch/xvfb-run.M8flBa’   ‘~/tmp/scratch/xvfb-run.McR4i3’ ‘~/tmp/scratch/xvfb-run.NElDth’   ‘~/tmp/scratch/xvfb-run.NhSHw5’ ‘~/tmp/scratch/xvfb-run.SYEZSr’   ‘~/tmp/scratch/xvfb-run.VKenBU’ ‘~/tmp/scratch/xvfb-run.Vn0VLU’   ‘~/tmp/scratch/xvfb-run.X00fV3’ ‘~/tmp/scratch/xvfb-run.XfkSjp’   ‘~/tmp/scratch/xvfb-run.a9iuyh’ ‘~/tmp/scratch/xvfb-run.cRf2R3’   ‘~/tmp/scratch/xvfb-run.dlWuhn’ ‘~/tmp/scratch/xvfb-run.fj1m2d’   ‘~/tmp/scratch/xvfb-run.hJldxO’ ‘~/tmp/scratch/xvfb-run.lRsKSj’   ‘~/tmp/scratch/xvfb-run.lr7vEK’ ‘~/tmp/scratch/xvfb-run.mNozaM’   ‘~/tmp/scratch/xvfb-run.pHbLpf’ ‘~/tmp/scratch/xvfb-run.sCABZG’   ‘~/tmp/scratch/xvfb-run.wPbizB’ ‘~/tmp/scratch/xvfb-run.zTwbxK’
• DONE

Status: 1 NOTE