• using R Under development (unstable) (2023-12-02 r85657)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-13 (Debian 13.2.0-7) 13.2.0     GNU Fortran (Debian 13.2.0-7) 13.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘WoodSimulatR/DESCRIPTION’ ... OK
• this is package ‘WoodSimulatR’ version ‘0.6.0’
• package encoding: UTF-8
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• checking whether package ‘WoodSimulatR’ can be installed ... OK See the install log for details.
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• checking examples ... [3s/4s] ERROR Running examples in ‘WoodSimulatR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: simbase_covar > ### Title: Calculate reference data for simulating values based on a > ### covariance matrix approach > ### Aliases: simbase_covar > > ### ** Examples > > # obtain a dataset for demonstration > dataset <- simulate_dataset(); > > # calculate a simbase without transforms > simbase_covar(dataset, c('f', 'E', 'rho', 'E_dyn')); $label [1] "n5000_t_cov" $variables [1] "f" "E" "rho" "E_dyn" $transforms list() $covar                f E rho E_dyn f 154.8334 21554.85 163.3545 19249.99 E 21554.8511 6286487.37 67721.3714 5810449.78 rho 163.3545 67721.37 2277.7861 77431.13 E_dyn 19249.9902 5810449.78 77431.1314 5856671.37 $means           f E rho E_dyn    29.81409 10632.15418 444.84522 11606.19187 $loadtype [1] "t" attr(,"class") [1] "simbase_covar" > > # calcuate a simbase with log-transformed f > simbase_covar(dataset, c('f', 'E', 'rho', 'E_dyn'), list(f = scales::log_trans())); Error in simbase_covar(dataset, c("f", "E", "rho", "E_dyn"), list(f = scales::log_trans())) :   All transforms must be objects of class "trans" (see scales::trans) Execution halted
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• checking re-building of vignette outputs ... [7s/11s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘woodsimulatr_basics.Rmd’ using rmarkdown Quitting from lines 431-439 [unnamed-chunk-15] (woodsimulatr_basics.Rmd) Error: processing vignette 'woodsimulatr_basics.Rmd' failed with diagnostics: All transforms must be objects of class "trans" (see scales::trans) --- failed re-building ‘woodsimulatr_basics.Rmd’ SUMMARY: processing the following file failed:   ‘woodsimulatr_basics.Rmd’ Error: Vignette re-building failed. Execution halted
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• DONE

Status: 2 ERRORs