- using R Under development (unstable) (2026-04-19 r89916)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-16) 15.2.0
GNU Fortran (Debian 15.2.0-16) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-04-20 12:52:53 UTC
- checking for file ‘W4MRUtils/DESCRIPTION’ ... OK
- this is package ‘W4MRUtils’ version ‘1.2.1’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘W4MRUtils’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/7s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/1s] ERROR
Running examples in ‘W4MRUtils-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: optparse_parameters
> ### Title: optparse_parameters - parse easily the command line parameters
> ### Aliases: optparse_parameters
>
> ### ** Examples
>
>
> args <- optparse_parameters(
+ a_integer = optparse_integer(),
+ a_float = optparse_numeric(),
+ a_boolean = optparse_flag(),
+ a_character = optparse_character(),
+ a_list = optparse_list(of = "numeric"),
+ a_char_list = optparse_list(of = "character"),
+ a_int_list = optparse_list(of = "integer"),
+ args = list(
+ "--a-integer",
+ "42",
+ "--a-float",
+ "3.14",
+ "--a-boolean",
+ "FALSE",
+ "--a-character",
+ "FALSE",
+ "--a-list",
+ "1.5,2,3",
+ "--a-char-list",
+ "1.5,2,3",
+ "--a-int-list",
+ "1.5,2,3"
+ )
+ )
Usage: %prog [options]
NA: error: "FALSE" is not a valid option
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [2s/3s] ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(W4MRUtils)
>
> test_check("W4MRUtils")
Please, use the 'optparse' library instead of the 'parse_args' function in the future.
Data Matrix contains no NA.
Please, use the 'optparse' library instead of the 'parse_args' function in the future.
Please, use the 'optparse' library instead of the 'parse_args' function in the future.
Please, use the 'optparse' library instead of the 'parse_args' function in the future.
Please, use the 'optparse' library instead of the 'parse_args' function in the future.
Saving _problems/test-optparse-helpers-32.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-optparse-helpers.R:5:3'): optparse everything ──────────────────
<optparse_bad_option_error/optparse_parse_error/error/condition>
Error in `"optparse::parse_args_helper()"`: "FALSE" is not a valid option
Backtrace:
▆
1. └─W4MRUtils::optparse_parameters(...) at test-optparse-helpers.R:5:3
2. └─optparse$parse_args(parser, args = args)
3. └─base::tryCatch(...)
4. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
5. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
6. └─value[[3L]](cond)
7. └─optparse:::pa_stop(object, e)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [5s/8s] OK
- checking PDF version of manual ... [6s/9s] OK
- checking HTML version of manual ... [3s/5s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 2 ERRORs