• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 13:22:51 UTC
• checking for file ‘UWHAM/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘UWHAM’ version ‘1.1’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Zhiqiang Tan <ztan@stat.rutgers.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = "Zhiqiang",                       family = "Tan",                       role = c("aut", "cre"),                       email = "ztan@stat.rutgers.edu"),                person(given = "Emilio",                       family = "Gallicchio",                       role = "aut")) as necessary. Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘UWHAM’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/4s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [2s/3s] OK
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp05iWxD’ ‘~/tmp/scratch/Rtmp0ds4AE’   ‘~/tmp/scratch/Rtmp1kTC4Q’ ‘~/tmp/scratch/Rtmp1rEHZe’   ‘~/tmp/scratch/Rtmp1rKYkD’ ‘~/tmp/scratch/Rtmp2NrWiy’   ‘~/tmp/scratch/Rtmp2WCoNb’ ‘~/tmp/scratch/Rtmp2cdvpn’   ‘~/tmp/scratch/Rtmp31OVYO’ ‘~/tmp/scratch/Rtmp3RN2dZ’   ‘~/tmp/scratch/Rtmp499a6C’ ‘~/tmp/scratch/Rtmp4DveoP’   ‘~/tmp/scratch/Rtmp5jx6rV’ ‘~/tmp/scratch/Rtmp5xdMbw’   ‘~/tmp/scratch/Rtmp6UiTZS’ ‘~/tmp/scratch/Rtmp6iAAN2’   ‘~/tmp/scratch/Rtmp6u5va7’ ‘~/tmp/scratch/Rtmp8RsOhD’   ‘~/tmp/scratch/Rtmp9ms4Vs’ ‘~/tmp/scratch/RtmpA0x9Yn’   ‘~/tmp/scratch/RtmpAGBpbi’ ‘~/tmp/scratch/RtmpAU6J23’   ‘~/tmp/scratch/RtmpAed7yj’ ‘~/tmp/scratch/RtmpCQ8wFx’   ‘~/tmp/scratch/RtmpCqUH3b’ ‘~/tmp/scratch/RtmpD3z1pp’   ‘~/tmp/scratch/RtmpDH6ioc’ ‘~/tmp/scratch/RtmpDL3VGk’   ‘~/tmp/scratch/RtmpDm4lmQ’ ‘~/tmp/scratch/RtmpE81wpQ’   ‘~/tmp/scratch/RtmpF5LnHm’ ‘~/tmp/scratch/RtmpGDMvZi’   ‘~/tmp/scratch/RtmpGQHX7n’ ‘~/tmp/scratch/RtmpGlUycb’   ‘~/tmp/scratch/RtmpHDt26q’ ‘~/tmp/scratch/RtmpHMawEX’   ‘~/tmp/scratch/RtmpHlw6hK’ ‘~/tmp/scratch/RtmpJVkBcq’   ‘~/tmp/scratch/RtmpNBsaEe’ ‘~/tmp/scratch/RtmpNUwCkr’   ‘~/tmp/scratch/RtmpOAFNcB’ ‘~/tmp/scratch/RtmpPbUPAX’   ‘~/tmp/scratch/RtmpPiyOtf’ ‘~/tmp/scratch/RtmpQ5Arw5’   ‘~/tmp/scratch/RtmpQY7zza’ ‘~/tmp/scratch/RtmpQxI7ML’   ‘~/tmp/scratch/RtmpSyTQW0’ ‘~/tmp/scratch/RtmpTRZB7e’   ‘~/tmp/scratch/RtmpTWDH7K’ ‘~/tmp/scratch/RtmpUMm8qv’   ‘~/tmp/scratch/RtmpVTZD7y’ ‘~/tmp/scratch/RtmpVaNqqx’   ‘~/tmp/scratch/RtmpW8zysI’ ‘~/tmp/scratch/RtmpWVsjpw’   ‘~/tmp/scratch/RtmpWsBY84’ ‘~/tmp/scratch/RtmpYJOMhz’   ‘~/tmp/scratch/RtmpYWSyzG’ ‘~/tmp/scratch/RtmpYpGcPi’   ‘~/tmp/scratch/RtmpZMDxVs’ ‘~/tmp/scratch/RtmpZgjiGg’   ‘~/tmp/scratch/RtmpanIWoy’ ‘~/tmp/scratch/RtmpbdLhvM’   ‘~/tmp/scratch/RtmpdOnPAE’ ‘~/tmp/scratch/Rtmpe2fulf’   ‘~/tmp/scratch/RtmpfotStO’ ‘~/tmp/scratch/RtmpgrTyLX’   ‘~/tmp/scratch/Rtmph42OxY’ ‘~/tmp/scratch/Rtmpi0OMLx’   ‘~/tmp/scratch/RtmpiPAUbK’ ‘~/tmp/scratch/RtmpicbsAz’   ‘~/tmp/scratch/Rtmpj46Snx’ ‘~/tmp/scratch/Rtmpk9fYj9’   ‘~/tmp/scratch/RtmplqkAJM’ ‘~/tmp/scratch/RtmpnLvNU0’   ‘~/tmp/scratch/RtmpnvdEAz’ ‘~/tmp/scratch/Rtmpo7Qx61’   ‘~/tmp/scratch/Rtmppk1aKx’ ‘~/tmp/scratch/RtmpqPTFWv’   ‘~/tmp/scratch/RtmprMKsgu’ ‘~/tmp/scratch/RtmprdCBBN’   ‘~/tmp/scratch/RtmproHQtM’ ‘~/tmp/scratch/RtmpryUBf8’   ‘~/tmp/scratch/RtmpsOIJPZ’ ‘~/tmp/scratch/Rtmptsdu4E’   ‘~/tmp/scratch/RtmpzV2Obb’ ‘~/tmp/scratch/xvfb-run.3mtkfe’   ‘~/tmp/scratch/xvfb-run.5V7cj5’ ‘~/tmp/scratch/xvfb-run.9fJcwy’   ‘~/tmp/scratch/xvfb-run.9oUbWu’ ‘~/tmp/scratch/xvfb-run.9xYZV8’   ‘~/tmp/scratch/xvfb-run.EIvlUM’ ‘~/tmp/scratch/xvfb-run.FCcNrD’   ‘~/tmp/scratch/xvfb-run.FH8fxX’ ‘~/tmp/scratch/xvfb-run.G1lJpj’   ‘~/tmp/scratch/xvfb-run.LYjR2g’ ‘~/tmp/scratch/xvfb-run.M0EFO6’   ‘~/tmp/scratch/xvfb-run.PEwjJV’ ‘~/tmp/scratch/xvfb-run.RqKJSH’   ‘~/tmp/scratch/xvfb-run.TJ0VHa’ ‘~/tmp/scratch/xvfb-run.UxA8e3’   ‘~/tmp/scratch/xvfb-run.WHAhp5’ ‘~/tmp/scratch/xvfb-run.Wsv8CW’   ‘~/tmp/scratch/xvfb-run.WzTxIW’ ‘~/tmp/scratch/xvfb-run.bY39PK’   ‘~/tmp/scratch/xvfb-run.ctq1hv’ ‘~/tmp/scratch/xvfb-run.gFMfwr’   ‘~/tmp/scratch/xvfb-run.hKG0VP’ ‘~/tmp/scratch/xvfb-run.k6DqgV’   ‘~/tmp/scratch/xvfb-run.l6atPo’ ‘~/tmp/scratch/xvfb-run.ltNt1C’   ‘~/tmp/scratch/xvfb-run.sKRtFi’ ‘~/tmp/scratch/xvfb-run.u5zxYc’   ‘~/tmp/scratch/xvfb-run.zZZaO7’
• DONE

Status: 2 NOTEs