• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 13:11:05 UTC
• checking for file ‘UPG/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘UPG’ version ‘0.3.5’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘UPG’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s/11s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/3s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0dQUve’ ‘~/tmp/scratch/Rtmp117BjT’   ‘~/tmp/scratch/Rtmp12Ng89’ ‘~/tmp/scratch/Rtmp1483dZ’   ‘~/tmp/scratch/Rtmp1SjxQ9’ ‘~/tmp/scratch/Rtmp1WSWwK’   ‘~/tmp/scratch/Rtmp1j0Kgh’ ‘~/tmp/scratch/Rtmp2OIvnL’   ‘~/tmp/scratch/Rtmp4FmYPn’ ‘~/tmp/scratch/Rtmp5JUFFN’   ‘~/tmp/scratch/Rtmp5qyHaV’ ‘~/tmp/scratch/Rtmp6F9pO8’   ‘~/tmp/scratch/Rtmp6vjPb5’ ‘~/tmp/scratch/Rtmp7eEJwp’   ‘~/tmp/scratch/Rtmp7ik1sz’ ‘~/tmp/scratch/Rtmp8Cv8ec’   ‘~/tmp/scratch/Rtmp8UfvUG’ ‘~/tmp/scratch/RtmpD6Z2aq’   ‘~/tmp/scratch/RtmpFD9Lp1’ ‘~/tmp/scratch/RtmpFLUA93’   ‘~/tmp/scratch/RtmpGeHhKq’ ‘~/tmp/scratch/RtmpI9XQLm’   ‘~/tmp/scratch/RtmpIh1b1Q’ ‘~/tmp/scratch/RtmpJ66uZ8’   ‘~/tmp/scratch/RtmpJsLl8S’ ‘~/tmp/scratch/RtmpK00Kmu’   ‘~/tmp/scratch/RtmpKjR89w’ ‘~/tmp/scratch/RtmpKpvJ1o’   ‘~/tmp/scratch/RtmpLp6wKo’ ‘~/tmp/scratch/RtmpNReNWi’   ‘~/tmp/scratch/RtmpNeCan6’ ‘~/tmp/scratch/RtmpOCqq4S’   ‘~/tmp/scratch/RtmpOHXqsA’ ‘~/tmp/scratch/RtmpOYl40c’   ‘~/tmp/scratch/RtmpOwcTKe’ ‘~/tmp/scratch/RtmpQfGZpq’   ‘~/tmp/scratch/RtmpRAzkWG’ ‘~/tmp/scratch/RtmpRHDBvV’   ‘~/tmp/scratch/RtmpRKnUiH’ ‘~/tmp/scratch/RtmpRMfB2N’   ‘~/tmp/scratch/RtmpRnjLkj’ ‘~/tmp/scratch/RtmpSUID9c’   ‘~/tmp/scratch/RtmpT4n4F8’ ‘~/tmp/scratch/RtmpTRcbyK’   ‘~/tmp/scratch/RtmpTSCb2r’ ‘~/tmp/scratch/RtmpTbecDi’   ‘~/tmp/scratch/RtmpU2Fyku’ ‘~/tmp/scratch/RtmpU8Uz0P’   ‘~/tmp/scratch/RtmpUvFwsY’ ‘~/tmp/scratch/RtmpVXanwW’   ‘~/tmp/scratch/RtmpVXfaxN’ ‘~/tmp/scratch/RtmpVsXtMU’   ‘~/tmp/scratch/RtmpXQdcbJ’ ‘~/tmp/scratch/RtmpXSDdXc’   ‘~/tmp/scratch/RtmpXcPZi1’ ‘~/tmp/scratch/RtmpYkxtvU’   ‘~/tmp/scratch/RtmpZKLfq8’ ‘~/tmp/scratch/Rtmpb9UYXi’   ‘~/tmp/scratch/RtmpbdPBD9’ ‘~/tmp/scratch/Rtmpc9MWvS’   ‘~/tmp/scratch/RtmpcaViDs’ ‘~/tmp/scratch/RtmpdaJKip’   ‘~/tmp/scratch/RtmpeEFzoW’ ‘~/tmp/scratch/RtmpeIw3OF’   ‘~/tmp/scratch/RtmpeZsKyk’ ‘~/tmp/scratch/Rtmpf0bpV9’   ‘~/tmp/scratch/Rtmpf1s2cY’ ‘~/tmp/scratch/Rtmpg80fro’   ‘~/tmp/scratch/RtmpgMol5W’ ‘~/tmp/scratch/Rtmphjqr4f’   ‘~/tmp/scratch/Rtmphl71MW’ ‘~/tmp/scratch/Rtmphy4wbH’   ‘~/tmp/scratch/Rtmpivjd0Q’ ‘~/tmp/scratch/RtmpjJHRN2’   ‘~/tmp/scratch/RtmpjPSPvZ’ ‘~/tmp/scratch/RtmpjzlB17’   ‘~/tmp/scratch/RtmplA0xfy’ ‘~/tmp/scratch/RtmplI34YI’   ‘~/tmp/scratch/RtmplPRphs’ ‘~/tmp/scratch/RtmpmDw2na’   ‘~/tmp/scratch/RtmpmnOnSj’ ‘~/tmp/scratch/Rtmpmtj9Aq’   ‘~/tmp/scratch/RtmpnTVURx’ ‘~/tmp/scratch/RtmpnaYVhx’   ‘~/tmp/scratch/RtmpopPOkY’ ‘~/tmp/scratch/RtmppboM4U’   ‘~/tmp/scratch/RtmpqL5IQ9’ ‘~/tmp/scratch/Rtmpql3WGa’   ‘~/tmp/scratch/RtmpsT1ARa’ ‘~/tmp/scratch/Rtmpsvx7jI’   ‘~/tmp/scratch/Rtmpt6VN0E’ ‘~/tmp/scratch/RtmptH6eiS’   ‘~/tmp/scratch/RtmptwxEFG’ ‘~/tmp/scratch/RtmpuMLOhx’   ‘~/tmp/scratch/RtmpuWyNg0’ ‘~/tmp/scratch/RtmpunicXE’   ‘~/tmp/scratch/RtmpvIvYEG’ ‘~/tmp/scratch/RtmpvSX9QB’   ‘~/tmp/scratch/RtmpvsTDEs’ ‘~/tmp/scratch/RtmpwDhJcH’   ‘~/tmp/scratch/RtmpwO567Z’ ‘~/tmp/scratch/RtmpwlGwoG’   ‘~/tmp/scratch/Rtmpwxxkca’ ‘~/tmp/scratch/RtmpyP7fXu’   ‘~/tmp/scratch/RtmpyZfPOU’ ‘~/tmp/scratch/RtmpyajibF’   ‘~/tmp/scratch/RtmpzGQPP3’ ‘~/tmp/scratch/RtmpzRCJxN’   ‘~/tmp/scratch/RtmpznArop’   ‘~/tmp/scratch/quarto-sessionf2233be435ebcfd3’   ‘~/tmp/scratch/xvfb-run.0MSiLe’ ‘~/tmp/scratch/xvfb-run.17aZWS’   ‘~/tmp/scratch/xvfb-run.1FTa22’ ‘~/tmp/scratch/xvfb-run.26ebvD’   ‘~/tmp/scratch/xvfb-run.3epGv8’ ‘~/tmp/scratch/xvfb-run.4aU8GR’   ‘~/tmp/scratch/xvfb-run.54BwHQ’ ‘~/tmp/scratch/xvfb-run.5WZhDN’   ‘~/tmp/scratch/xvfb-run.5pygb2’ ‘~/tmp/scratch/xvfb-run.6Vnbi4’   ‘~/tmp/scratch/xvfb-run.6u2ZXF’ ‘~/tmp/scratch/xvfb-run.6w09Rv’   ‘~/tmp/scratch/xvfb-run.97KNeF’ ‘~/tmp/scratch/xvfb-run.AItmEJ’   ‘~/tmp/scratch/xvfb-run.AfI7mY’ ‘~/tmp/scratch/xvfb-run.Bf0DuK’   ‘~/tmp/scratch/xvfb-run.CNb6tA’ ‘~/tmp/scratch/xvfb-run.FyL4t1’   ‘~/tmp/scratch/xvfb-run.OMxGzM’ ‘~/tmp/scratch/xvfb-run.OwCnSr’   ‘~/tmp/scratch/xvfb-run.PQqqOL’ ‘~/tmp/scratch/xvfb-run.RdfXRL’   ‘~/tmp/scratch/xvfb-run.TL8i9D’ ‘~/tmp/scratch/xvfb-run.U1plJ5’   ‘~/tmp/scratch/xvfb-run.UqTWCK’ ‘~/tmp/scratch/xvfb-run.YV6V0s’   ‘~/tmp/scratch/xvfb-run.exR24s’ ‘~/tmp/scratch/xvfb-run.jNGkCt’   ‘~/tmp/scratch/xvfb-run.l3wN3y’ ‘~/tmp/scratch/xvfb-run.lBd2nu’   ‘~/tmp/scratch/xvfb-run.lHHvZ0’ ‘~/tmp/scratch/xvfb-run.qgvL7P’   ‘~/tmp/scratch/xvfb-run.rMMKrD’ ‘~/tmp/scratch/xvfb-run.rxCoqD’   ‘~/tmp/scratch/xvfb-run.s4cVeG’ ‘~/tmp/scratch/xvfb-run.s7yvOg’   ‘~/tmp/scratch/xvfb-run.u5WCDk’ ‘~/tmp/scratch/xvfb-run.utAstA’   ‘~/tmp/scratch/xvfb-run.yiqWat’ ‘~/tmp/scratch/xvfb-run.yuK42C’   ‘~/tmp/scratch/xvfb-run.z17i8i’ ‘~/tmp/scratch/xvfb-run.zdUvHu’   ‘/dev/shm/256948bc-7aee-4926-99fb-4229503b98b6’   ‘/dev/shm/256948bc-7aee-4926-99fb-4229503b98b6_counter’   ‘/dev/shm/32f1f24e-2243-4a22-84ec-484b752e5667’   ‘/dev/shm/32f1f24e-2243-4a22-84ec-484b752e5667_counter’   ‘/dev/shm/3329f19a-4917-4f26-ba9f-645000a44da2’   ‘/dev/shm/3329f19a-4917-4f26-ba9f-645000a44da2_counter’   ‘/dev/shm/3a33961a-c7c1-4d7c-9407-b218d704258c’   ‘/dev/shm/3a33961a-c7c1-4d7c-9407-b218d704258c_counter’   ‘/dev/shm/530c5744-6154-4842-bde7-ab7cc092415e’   ‘/dev/shm/530c5744-6154-4842-bde7-ab7cc092415e_counter’   ‘/dev/shm/6b4c7a84-600d-4a7c-8d2e-e0a6fb1df9bc’   ‘/dev/shm/6b4c7a84-600d-4a7c-8d2e-e0a6fb1df9bc_counter’   ‘/dev/shm/6c200fdd-b353-48e7-b907-b3343a86b0de’   ‘/dev/shm/6c200fdd-b353-48e7-b907-b3343a86b0de_counter’   ‘/dev/shm/6df24378-1bd4-4625-b300-5220e0d62066’   ‘/dev/shm/6df24378-1bd4-4625-b300-5220e0d62066_counter’   ‘/dev/shm/6f0b8721-98c0-4d05-8584-bdf763f1f304’   ‘/dev/shm/6f0b8721-98c0-4d05-8584-bdf763f1f304_counter’   ‘/dev/shm/73676125-0d00-4a0c-8e43-036b7a0a9ee9’   ‘/dev/shm/73676125-0d00-4a0c-8e43-036b7a0a9ee9_counter’   ‘/dev/shm/7527385a-55c5-4325-aaa8-889b55960258’   ‘/dev/shm/7527385a-55c5-4325-aaa8-889b55960258_counter’   ‘/dev/shm/7b571d6e-e5b7-4b25-8c90-31176a51cd0f’   ‘/dev/shm/7b571d6e-e5b7-4b25-8c90-31176a51cd0f_counter’   ‘/dev/shm/a1433371-a1f3-41b2-8f18-961bd212d42a’   ‘/dev/shm/a1433371-a1f3-41b2-8f18-961bd212d42a_counter’   ‘/dev/shm/a9c53b04-c26c-4159-b417-e48f224e8b85’   ‘/dev/shm/a9c53b04-c26c-4159-b417-e48f224e8b85_counter’   ‘/dev/shm/b0d020f5-0370-417d-be59-cb804fd1ef02’   ‘/dev/shm/b0d020f5-0370-417d-be59-cb804fd1ef02_counter’   ‘/dev/shm/baf5fc54-7546-431c-942f-6949f45c9cd1’   ‘/dev/shm/baf5fc54-7546-431c-942f-6949f45c9cd1_counter’   ‘/dev/shm/d2920059-074e-4ce2-8fc3-2f0fb2bb8c34’   ‘/dev/shm/d2920059-074e-4ce2-8fc3-2f0fb2bb8c34_counter’   ‘/dev/shm/ecfdd6d7-92ad-4631-8eec-b81f350af086’   ‘/dev/shm/ecfdd6d7-92ad-4631-8eec-b81f350af086_counter’   ‘/dev/shm/fd5f2590-2766-4db3-9fd7-ac7f91c3bbc1’   ‘/dev/shm/fd5f2590-2766-4db3-9fd7-ac7f91c3bbc1_counter’   ‘/dev/shm/sem.06cb37fe-8cf1-4222-befa-4bfebf6f20b4_bigmemory_counter_mutex’   ‘/dev/shm/sem.15e40ee6-3971-4dc3-af1e-3598f4d81264_bigmemory_counter_mutex’   ‘/dev/shm/sem.256948bc-7aee-4926-99fb-4229503b98b6_bigmemory_counter_mutex’   ‘/dev/shm/sem.2aec6478-7b62-4bba-a1ae-70f169cf7781_bigmemory_counter_mutex’   ‘/dev/shm/sem.32f1f24e-2243-4a22-84ec-484b752e5667_bigmemory_counter_mutex’   ‘/dev/shm/sem.3329f19a-4917-4f26-ba9f-645000a44da2_bigmemory_counter_mutex’   ‘/dev/shm/sem.3a33961a-c7c1-4d7c-9407-b218d704258c_bigmemory_counter_mutex’   ‘/dev/shm/sem.530c5744-6154-4842-bde7-ab7cc092415e_bigmemory_counter_mutex’   ‘/dev/shm/sem.6b4c7a84-600d-4a7c-8d2e-e0a6fb1df9bc_bigmemory_counter_mutex’   ‘/dev/shm/sem.6c200fdd-b353-48e7-b907-b3343a86b0de_bigmemory_counter_mutex’   ‘/dev/shm/sem.6df24378-1bd4-4625-b300-5220e0d62066_bigmemory_counter_mutex’   ‘/dev/shm/sem.6f0b8721-98c0-4d05-8584-bdf763f1f304_bigmemory_counter_mutex’   ‘/dev/shm/sem.73676125-0d00-4a0c-8e43-036b7a0a9ee9_bigmemory_counter_mutex’   ‘/dev/shm/sem.7527385a-55c5-4325-aaa8-889b55960258_bigmemory_counter_mutex’   ‘/dev/shm/sem.7b571d6e-e5b7-4b25-8c90-31176a51cd0f_bigmemory_counter_mutex’   ‘/dev/shm/sem.8f027a37-d559-49de-b06f-ebb9d95f0f4c_bigmemory_counter_mutex’   ‘/dev/shm/sem.a1433371-a1f3-41b2-8f18-961bd212d42a_bigmemory_counter_mutex’   ‘/dev/shm/sem.a9c53b04-c26c-4159-b417-e48f224e8b85_bigmemory_counter_mutex’   ‘/dev/shm/sem.b0d020f5-0370-417d-be59-cb804fd1ef02_bigmemory_counter_mutex’   ‘/dev/shm/sem.baf5fc54-7546-431c-942f-6949f45c9cd1_bigmemory_counter_mutex’   ‘/dev/shm/sem.bd5950de-703e-4974-be2d-79c40a93079a_bigmemory_counter_mutex’   ‘/dev/shm/sem.c132a853-3500-4aac-9d87-aa352d8ddfea_bigmemory_counter_mutex’   ‘/dev/shm/sem.d2920059-074e-4ce2-8fc3-2f0fb2bb8c34_bigmemory_counter_mutex’   ‘/dev/shm/sem.ecfdd6d7-92ad-4631-8eec-b81f350af086_bigmemory_counter_mutex’   ‘/dev/shm/sem.fd5f2590-2766-4db3-9fd7-ac7f91c3bbc1_bigmemory_counter_mutex’
• DONE

Status: 1 NOTE