• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 13:09:06 UTC
• checking for file ‘TopKLists/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘TopKLists’ version ‘1.0.8’
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Bastian Pfeifer <bastian.pfeifer@medunigraz.at>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: c(person(given = c("Michael", "G."),                       family = "Schimek",                       role = "aut"),                person(given = "Eva",                       family = "Budinska",                       role = "aut"),                person(given = "Jie",                       family = "Ding",                       role = "aut"),                person(given = c("Karl", "G."),                       family = "Kugler",                       role = "aut"),                person(given = "Vendula",                       family = "Svendova",                       role = "aut"),                person(given = "Shili",                       family = "Lin",                       role = "aut"),                person(given = "Bastian",                       family = "Pfeifer",                       role = c("aut", "cre"),                       email = "bastian.pfeifer@medunigraz.at")) as necessary.
• checking package namespace information ... OK
• checking package dependencies ... INFO Packages suggested but not available for checking:   'RGtk2', 'gWidgets2RGtk2'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘TopKLists’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [13s/17s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [4s/5s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [19s/30s] OK
• checking PDF version of manual ... [4s/8s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0XklGq’ ‘~/tmp/scratch/Rtmp13NB82’   ‘~/tmp/scratch/Rtmp1FUKMx’ ‘~/tmp/scratch/Rtmp2P9rJ5’   ‘~/tmp/scratch/Rtmp2faY4U’ ‘~/tmp/scratch/Rtmp2oovHE’   ‘~/tmp/scratch/Rtmp2vF1eg’ ‘~/tmp/scratch/Rtmp3KKgaB’   ‘~/tmp/scratch/Rtmp3xFpet’ ‘~/tmp/scratch/Rtmp68IVfw’   ‘~/tmp/scratch/Rtmp6UtBze’ ‘~/tmp/scratch/Rtmp6mZjCL’   ‘~/tmp/scratch/Rtmp78PN83’ ‘~/tmp/scratch/Rtmp7B7xsH’   ‘~/tmp/scratch/Rtmp8YzlYV’ ‘~/tmp/scratch/Rtmp8fkhGV’   ‘~/tmp/scratch/Rtmp94Htvf’ ‘~/tmp/scratch/Rtmp9qfxRo’   ‘~/tmp/scratch/Rtmp9wFao1’ ‘~/tmp/scratch/Rtmp9xhwHE’   ‘~/tmp/scratch/RtmpAOPM5i’ ‘~/tmp/scratch/RtmpAQ7jhL’   ‘~/tmp/scratch/RtmpARgduQ’ ‘~/tmp/scratch/RtmpAzbph9’   ‘~/tmp/scratch/RtmpB77ILz’ ‘~/tmp/scratch/RtmpBGtM2l’   ‘~/tmp/scratch/RtmpCJ6Ba5’ ‘~/tmp/scratch/RtmpCLfFKf’   ‘~/tmp/scratch/RtmpChFeqB’ ‘~/tmp/scratch/RtmpDabiNJ’   ‘~/tmp/scratch/RtmpDcRk5E’ ‘~/tmp/scratch/RtmpEOhX2Q’   ‘~/tmp/scratch/RtmpF0bBfZ’ ‘~/tmp/scratch/RtmpFeIy0A’   ‘~/tmp/scratch/RtmpFoAz7E’ ‘~/tmp/scratch/RtmpGYHBAP’   ‘~/tmp/scratch/RtmpGePADU’ ‘~/tmp/scratch/RtmpHVWg1f’   ‘~/tmp/scratch/RtmpI0VfNk’ ‘~/tmp/scratch/RtmpIfbxv1’   ‘~/tmp/scratch/RtmpIwAiMP’ ‘~/tmp/scratch/RtmpJeHh0K’   ‘~/tmp/scratch/RtmpJjiMwg’ ‘~/tmp/scratch/RtmpJjr9Bb’   ‘~/tmp/scratch/RtmpKNb31E’ ‘~/tmp/scratch/RtmpKOM4qy’   ‘~/tmp/scratch/RtmpLAW6Zz’ ‘~/tmp/scratch/RtmpLpOHBO’   ‘~/tmp/scratch/RtmpMA30GZ’ ‘~/tmp/scratch/RtmpMDms8T’   ‘~/tmp/scratch/RtmpMJYuWB’ ‘~/tmp/scratch/RtmpMXMp50’   ‘~/tmp/scratch/RtmpMm3KuS’ ‘~/tmp/scratch/RtmpN0O8oK’   ‘~/tmp/scratch/RtmpNDtchg’ ‘~/tmp/scratch/RtmpNdNiOn’   ‘~/tmp/scratch/RtmpNn4zJF’ ‘~/tmp/scratch/RtmpOOnSqO’   ‘~/tmp/scratch/RtmpP5ydcC’ ‘~/tmp/scratch/RtmpQ9n5hK’   ‘~/tmp/scratch/RtmpQVbTE3’ ‘~/tmp/scratch/RtmpR4c49e’   ‘~/tmp/scratch/RtmpR4yZGL’ ‘~/tmp/scratch/RtmpS6PELE’   ‘~/tmp/scratch/RtmpSGtZuk’ ‘~/tmp/scratch/RtmpTAAejI’   ‘~/tmp/scratch/RtmpTFhgI1’ ‘~/tmp/scratch/RtmpTSkdbF’   ‘~/tmp/scratch/RtmpTnuulf’ ‘~/tmp/scratch/RtmpUD0hUt’   ‘~/tmp/scratch/RtmpUPWt8O’ ‘~/tmp/scratch/RtmpUv7Nte’   ‘~/tmp/scratch/RtmpWMiGHT’ ‘~/tmp/scratch/RtmpWbfX10’   ‘~/tmp/scratch/RtmpXY5hU1’ ‘~/tmp/scratch/RtmpYSQ6Ha’   ‘~/tmp/scratch/RtmpYW1hHa’ ‘~/tmp/scratch/RtmpYjmvrP’   ‘~/tmp/scratch/RtmpYsBlk7’ ‘~/tmp/scratch/RtmpZOc9MX’   ‘~/tmp/scratch/RtmpZTcciJ’ ‘~/tmp/scratch/RtmpZd5279’   ‘~/tmp/scratch/RtmpZnG3pD’ ‘~/tmp/scratch/RtmpZtlcZq’   ‘~/tmp/scratch/RtmpaGUNZI’ ‘~/tmp/scratch/RtmpaVRiUu’   ‘~/tmp/scratch/RtmpajNxJO’ ‘~/tmp/scratch/Rtmpat0jim’   ‘~/tmp/scratch/RtmpbZzE0b’ ‘~/tmp/scratch/RtmpbtW6dV’   ‘~/tmp/scratch/RtmpcHf2kl’ ‘~/tmp/scratch/RtmpcKKoPz’   ‘~/tmp/scratch/RtmpcNb3VA’ ‘~/tmp/scratch/RtmpcS5E2x’   ‘~/tmp/scratch/RtmpdrhbdX’ ‘~/tmp/scratch/Rtmpe1NzWJ’   ‘~/tmp/scratch/RtmpeWFNmj’ ‘~/tmp/scratch/Rtmped4foM’   ‘~/tmp/scratch/RtmpeqLU0C’ ‘~/tmp/scratch/RtmpfAJMfM’   ‘~/tmp/scratch/RtmpfC8xlE’ ‘~/tmp/scratch/RtmpfCD4La’   ‘~/tmp/scratch/RtmpfVxnNS’ ‘~/tmp/scratch/Rtmpg3XsL5’   ‘~/tmp/scratch/Rtmpg41j6Y’ ‘~/tmp/scratch/Rtmpg5mJay’   ‘~/tmp/scratch/RtmpgecCRG’ ‘~/tmp/scratch/RtmpgyxSfi’   ‘~/tmp/scratch/Rtmph0NHo1’ ‘~/tmp/scratch/Rtmph4dpZU’   ‘~/tmp/scratch/RtmphpKiJV’ ‘~/tmp/scratch/RtmphwbZ3U’   ‘~/tmp/scratch/RtmpigLOcG’ ‘~/tmp/scratch/RtmpjJeSaW’   ‘~/tmp/scratch/Rtmpjpah6H’ ‘~/tmp/scratch/RtmpkYCu20’   ‘~/tmp/scratch/RtmplT85mh’ ‘~/tmp/scratch/RtmpllY0ow’   ‘~/tmp/scratch/RtmpmHCd4u’ ‘~/tmp/scratch/RtmpmR6jmF’   ‘~/tmp/scratch/RtmpmT1eUD’ ‘~/tmp/scratch/RtmpmzxNXT’   ‘~/tmp/scratch/Rtmpn21Feu’ ‘~/tmp/scratch/RtmpnsQSiz’   ‘~/tmp/scratch/Rtmpp7LxeS’ ‘~/tmp/scratch/RtmpqUQJ78’   ‘~/tmp/scratch/Rtmpr9ugUX’ ‘~/tmp/scratch/Rtmprb51Ir’   ‘~/tmp/scratch/RtmpsUMqHk’ ‘~/tmp/scratch/Rtmptz6xIb’   ‘~/tmp/scratch/RtmpuXnfz9’ ‘~/tmp/scratch/Rtmpv0OSnO’   ‘~/tmp/scratch/Rtmpv3OxAb’ ‘~/tmp/scratch/RtmpvEVTbZ’   ‘~/tmp/scratch/RtmpvUyUW0’ ‘~/tmp/scratch/RtmpvyCxRq’   ‘~/tmp/scratch/Rtmpx1QqX8’ ‘~/tmp/scratch/Rtmpx6WG2i’   ‘~/tmp/scratch/Rtmpy5toEd’ ‘~/tmp/scratch/RtmpyWjsSC’   ‘~/tmp/scratch/Rtmpyf8jCJ’ ‘~/tmp/scratch/RtmpymXQXo’   ‘~/tmp/scratch/RtmpyxTIvE’ ‘~/tmp/scratch/RtmpzL5zrn’   ‘~/tmp/scratch/RtmpzhAkhQ’ ‘~/tmp/scratch/Rtmpzqz84h’   ‘~/tmp/scratch/RtmpzxadZo’ ‘~/tmp/scratch/RtmpzyHZis’   ‘~/tmp/scratch/quarto-sessiona656b9e83bb6428f’   ‘~/tmp/scratch/xvfb-run.02Zjz3’ ‘~/tmp/scratch/xvfb-run.04FpDE’   ‘~/tmp/scratch/xvfb-run.1E2paA’ ‘~/tmp/scratch/xvfb-run.1LmWso’   ‘~/tmp/scratch/xvfb-run.25EzJE’ ‘~/tmp/scratch/xvfb-run.6DxC42’   ‘~/tmp/scratch/xvfb-run.6muLX7’ ‘~/tmp/scratch/xvfb-run.7IKAhG’   ‘~/tmp/scratch/xvfb-run.7oVLFp’ ‘~/tmp/scratch/xvfb-run.836xgw’   ‘~/tmp/scratch/xvfb-run.ALTuBD’ ‘~/tmp/scratch/xvfb-run.AwOUk6’   ‘~/tmp/scratch/xvfb-run.CDXtlD’ ‘~/tmp/scratch/xvfb-run.CY85Ir’   ‘~/tmp/scratch/xvfb-run.DURB2I’ ‘~/tmp/scratch/xvfb-run.DxGknM’   ‘~/tmp/scratch/xvfb-run.G5rdVM’ ‘~/tmp/scratch/xvfb-run.GsIYJv’   ‘~/tmp/scratch/xvfb-run.JdXwCq’ ‘~/tmp/scratch/xvfb-run.KfCWJj’   ‘~/tmp/scratch/xvfb-run.LAocb8’ ‘~/tmp/scratch/xvfb-run.NE1paZ’   ‘~/tmp/scratch/xvfb-run.NRUNOa’ ‘~/tmp/scratch/xvfb-run.NYkACB’   ‘~/tmp/scratch/xvfb-run.P53VwW’ ‘~/tmp/scratch/xvfb-run.PuGaCF’   ‘~/tmp/scratch/xvfb-run.PvFVV9’ ‘~/tmp/scratch/xvfb-run.Q3xa52’   ‘~/tmp/scratch/xvfb-run.QDqS5x’ ‘~/tmp/scratch/xvfb-run.QV5b80’   ‘~/tmp/scratch/xvfb-run.VDoMGt’ ‘~/tmp/scratch/xvfb-run.VQVYcG’   ‘~/tmp/scratch/xvfb-run.WcfWjN’ ‘~/tmp/scratch/xvfb-run.Wh7qwm’   ‘~/tmp/scratch/xvfb-run.Xwkxyc’ ‘~/tmp/scratch/xvfb-run.YAmI9U’   ‘~/tmp/scratch/xvfb-run.ZZ2mqd’ ‘~/tmp/scratch/xvfb-run.aXjdS0’   ‘~/tmp/scratch/xvfb-run.bS1e68’ ‘~/tmp/scratch/xvfb-run.cI2GuD’   ‘~/tmp/scratch/xvfb-run.eOUj0m’ ‘~/tmp/scratch/xvfb-run.eY9DEM’   ‘~/tmp/scratch/xvfb-run.fQljie’ ‘~/tmp/scratch/xvfb-run.fv3VXF’   ‘~/tmp/scratch/xvfb-run.h2cJCh’ ‘~/tmp/scratch/xvfb-run.irxhDc’   ‘~/tmp/scratch/xvfb-run.j8KRlV’ ‘~/tmp/scratch/xvfb-run.k1T3sC’   ‘~/tmp/scratch/xvfb-run.l4Jsy8’ ‘~/tmp/scratch/xvfb-run.lDWH3M’   ‘~/tmp/scratch/xvfb-run.qgEmBx’ ‘~/tmp/scratch/xvfb-run.ruK4tv’   ‘~/tmp/scratch/xvfb-run.t6vaEd’ ‘~/tmp/scratch/xvfb-run.tkgydg’   ‘~/tmp/scratch/xvfb-run.v4MSn4’ ‘~/tmp/scratch/xvfb-run.wMKruu’   ‘~/tmp/scratch/xvfb-run.wfolMu’ ‘~/tmp/scratch/xvfb-run.xVd5Oq’   ‘~/tmp/scratch/xvfb-run.xtzKZc’ ‘~/tmp/scratch/xvfb-run.yrzytk’   ‘~/tmp/scratch/xvfb-run.yz3wPJ’ ‘~/tmp/scratch/xvfb-run.zz59R1’   ‘/dev/shm/06cb37fe-8cf1-4222-befa-4bfebf6f20b4’   ‘/dev/shm/06cb37fe-8cf1-4222-befa-4bfebf6f20b4_counter’   ‘/dev/shm/15e40ee6-3971-4dc3-af1e-3598f4d81264’   ‘/dev/shm/15e40ee6-3971-4dc3-af1e-3598f4d81264_counter’   ‘/dev/shm/2aec6478-7b62-4bba-a1ae-70f169cf7781’   ‘/dev/shm/2aec6478-7b62-4bba-a1ae-70f169cf7781_counter’   ‘/dev/shm/8f027a37-d559-49de-b06f-ebb9d95f0f4c’   ‘/dev/shm/8f027a37-d559-49de-b06f-ebb9d95f0f4c_counter’   ‘/dev/shm/bd5950de-703e-4974-be2d-79c40a93079a’   ‘/dev/shm/bd5950de-703e-4974-be2d-79c40a93079a_counter’   ‘/dev/shm/c132a853-3500-4aac-9d87-aa352d8ddfea’   ‘/dev/shm/c132a853-3500-4aac-9d87-aa352d8ddfea_counter’   ‘/dev/shm/sem.50d85242-8b47-46b9-bc90-602058525457_bigmemory_counter_mutex’   ‘/dev/shm/sem.527862ae-f080-4a76-9def-e2465fee717b_bigmemory_counter_mutex’   ‘/dev/shm/sem.9ed40b56-a2e8-4a1f-a8b9-435f980cc9d9_bigmemory_counter_mutex’   ‘/dev/shm/sem.b5952819-6b8e-483b-9d46-c3123c9b771e_bigmemory_counter_mutex’   ‘/dev/shm/sem.c7dacfee-cdf2-4e37-91d4-5ff6782190f9_bigmemory_counter_mutex’   ‘/dev/shm/sem.fab05b85-70d2-4d57-9a6f-aaafee30b975_bigmemory_counter_mutex’
• DONE

Status: 2 NOTEs