• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 13:09:09 UTC
• checking for file ‘TidyMultiqc/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘TidyMultiqc’ version ‘1.0.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] NOTE Maintainer: ‘Michael Milton <michael.r.milton@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: person(given = "Michael",                     family = "Milton",                     role = c("aut", "cre"),                     email = "michael.r.milton@gmail.com") as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘TidyMultiqc’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/5s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [6s/8s] OK   Running ‘testthat.R’ [6s/8s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [9s/12s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp04I2uC’ ‘~/tmp/scratch/Rtmp0GOEsZ’   ‘~/tmp/scratch/Rtmp0RlJUD’ ‘~/tmp/scratch/Rtmp0oVTtz’   ‘~/tmp/scratch/Rtmp1aBkkP’ ‘~/tmp/scratch/Rtmp1z4Gty’   ‘~/tmp/scratch/Rtmp206un6’ ‘~/tmp/scratch/Rtmp2J3T4i’   ‘~/tmp/scratch/Rtmp3C8Apn’ ‘~/tmp/scratch/Rtmp3Z8Mjg’   ‘~/tmp/scratch/Rtmp3bNtsH’ ‘~/tmp/scratch/Rtmp3oXx1j’   ‘~/tmp/scratch/Rtmp4COvJy’ ‘~/tmp/scratch/Rtmp4T4C8X’   ‘~/tmp/scratch/Rtmp4vaC1m’ ‘~/tmp/scratch/Rtmp5GYlXn’   ‘~/tmp/scratch/Rtmp5OlhL0’ ‘~/tmp/scratch/Rtmp5qQBtX’   ‘~/tmp/scratch/Rtmp61yy7X’ ‘~/tmp/scratch/Rtmp65MJvq’   ‘~/tmp/scratch/Rtmp6uxxmW’ ‘~/tmp/scratch/Rtmp6yHEVo’   ‘~/tmp/scratch/Rtmp7L6r0k’ ‘~/tmp/scratch/Rtmp7QOsTq’   ‘~/tmp/scratch/Rtmp7gL2la’ ‘~/tmp/scratch/Rtmp8W7TDI’   ‘~/tmp/scratch/Rtmp8sz4Va’ ‘~/tmp/scratch/RtmpAJ3BI5’   ‘~/tmp/scratch/RtmpAsX5aG’ ‘~/tmp/scratch/RtmpAvPvP5’   ‘~/tmp/scratch/RtmpB4eXEB’ ‘~/tmp/scratch/RtmpBk3Bbn’   ‘~/tmp/scratch/RtmpBp5EYw’ ‘~/tmp/scratch/RtmpC6GIKi’   ‘~/tmp/scratch/RtmpCyrDPA’ ‘~/tmp/scratch/RtmpDMZ5Kc’   ‘~/tmp/scratch/RtmpDWx73v’ ‘~/tmp/scratch/RtmpEAjc8G’   ‘~/tmp/scratch/RtmpEWOBOT’ ‘~/tmp/scratch/RtmpEpdzPW’   ‘~/tmp/scratch/RtmpG1m9fx’ ‘~/tmp/scratch/RtmpG5QlFJ’   ‘~/tmp/scratch/RtmpGUiNY3’ ‘~/tmp/scratch/RtmpH5GNdQ’   ‘~/tmp/scratch/RtmpIsR7KV’ ‘~/tmp/scratch/RtmpJNA4ce’   ‘~/tmp/scratch/RtmpJfQA9h’ ‘~/tmp/scratch/RtmpJx9Evk’   ‘~/tmp/scratch/RtmpK8NhZO’ ‘~/tmp/scratch/RtmpKdwUJT’   ‘~/tmp/scratch/RtmpLtQPNi’ ‘~/tmp/scratch/RtmpM3lfWu’   ‘~/tmp/scratch/RtmpMIZcQB’ ‘~/tmp/scratch/RtmpN6HABS’   ‘~/tmp/scratch/RtmpO8xTdR’ ‘~/tmp/scratch/RtmpOEtLpI’   ‘~/tmp/scratch/RtmpOfe1vv’ ‘~/tmp/scratch/RtmpPIEvlt’   ‘~/tmp/scratch/RtmpPSSvsp’ ‘~/tmp/scratch/RtmpPUoiN3’   ‘~/tmp/scratch/RtmpPoJVIn’ ‘~/tmp/scratch/RtmpPsCO6l’   ‘~/tmp/scratch/RtmpQOkGeH’ ‘~/tmp/scratch/RtmpQrIh5c’   ‘~/tmp/scratch/RtmpQs765e’ ‘~/tmp/scratch/RtmpQznX48’   ‘~/tmp/scratch/RtmpSFZOgn’ ‘~/tmp/scratch/RtmpSexPDf’   ‘~/tmp/scratch/RtmpSjdDZo’ ‘~/tmp/scratch/RtmpT8XsSJ’   ‘~/tmp/scratch/RtmpTaFAqP’ ‘~/tmp/scratch/RtmpVa8axI’   ‘~/tmp/scratch/RtmpW8XHwc’ ‘~/tmp/scratch/RtmpXn33Hj’   ‘~/tmp/scratch/RtmpYF4YH9’ ‘~/tmp/scratch/RtmpZPkSPU’   ‘~/tmp/scratch/RtmpZcCrBo’ ‘~/tmp/scratch/RtmpZre4Az’   ‘~/tmp/scratch/RtmpaDojWE’ ‘~/tmp/scratch/RtmpaNs1Ia’   ‘~/tmp/scratch/RtmpaTQNFA’ ‘~/tmp/scratch/RtmpaZVJQM’   ‘~/tmp/scratch/RtmpawrrM3’ ‘~/tmp/scratch/Rtmpb5MXkP’   ‘~/tmp/scratch/RtmpbIvN7g’ ‘~/tmp/scratch/RtmpbNjc35’   ‘~/tmp/scratch/RtmpbrJKTL’ ‘~/tmp/scratch/RtmpcAP8T2’   ‘~/tmp/scratch/Rtmpe3bn44’ ‘~/tmp/scratch/Rtmpe3t0bV’   ‘~/tmp/scratch/Rtmpe6KaN9’ ‘~/tmp/scratch/RtmpeT03dB’   ‘~/tmp/scratch/RtmpfTIe7V’ ‘~/tmp/scratch/RtmpgGBZnj’   ‘~/tmp/scratch/RtmpgboNAQ’ ‘~/tmp/scratch/RtmpgrYtwB’   ‘~/tmp/scratch/RtmphA4vzY’ ‘~/tmp/scratch/RtmphYaM9q’   ‘~/tmp/scratch/RtmpiZX3EB’ ‘~/tmp/scratch/RtmpifaO2x’   ‘~/tmp/scratch/RtmpjlvtUu’ ‘~/tmp/scratch/RtmpkHsndF’   ‘~/tmp/scratch/RtmpkeUUUC’ ‘~/tmp/scratch/RtmpksIBHQ’   ‘~/tmp/scratch/Rtmpm1FPBn’ ‘~/tmp/scratch/RtmpojVFDi’   ‘~/tmp/scratch/RtmpoqD3cF’ ‘~/tmp/scratch/RtmpouVkX9’   ‘~/tmp/scratch/RtmppkxjiR’ ‘~/tmp/scratch/RtmpsC0HnO’   ‘~/tmp/scratch/RtmpsVQsUY’ ‘~/tmp/scratch/RtmpsubvSF’   ‘~/tmp/scratch/RtmptEPUBZ’ ‘~/tmp/scratch/RtmpuRAXqv’   ‘~/tmp/scratch/RtmpuuDKCF’ ‘~/tmp/scratch/RtmpxA3gQC’   ‘~/tmp/scratch/RtmpxB7mrI’ ‘~/tmp/scratch/RtmpxFVIhD’   ‘~/tmp/scratch/RtmpyDpmKs’ ‘~/tmp/scratch/RtmpyQvwgG’   ‘~/tmp/scratch/RtmpyV1zwC’ ‘~/tmp/scratch/RtmpyuGnua’   ‘~/tmp/scratch/Rtmpzdy10O’ ‘~/tmp/scratch/RtmpzqLYiT’   ‘~/tmp/scratch/xvfb-run.0cnXWC’ ‘~/tmp/scratch/xvfb-run.31Xdop’   ‘~/tmp/scratch/xvfb-run.3sxqME’ ‘~/tmp/scratch/xvfb-run.4Nsufg’   ‘~/tmp/scratch/xvfb-run.5XkWxy’ ‘~/tmp/scratch/xvfb-run.6JellE’   ‘~/tmp/scratch/xvfb-run.8Jq6V7’ ‘~/tmp/scratch/xvfb-run.9Ltgdz’   ‘~/tmp/scratch/xvfb-run.AUzxRo’ ‘~/tmp/scratch/xvfb-run.EkAmGn’   ‘~/tmp/scratch/xvfb-run.G97w2y’ ‘~/tmp/scratch/xvfb-run.GGhbmB’   ‘~/tmp/scratch/xvfb-run.GzGJtY’ ‘~/tmp/scratch/xvfb-run.IVokeB’   ‘~/tmp/scratch/xvfb-run.Ivlpdg’ ‘~/tmp/scratch/xvfb-run.JBPJcD’   ‘~/tmp/scratch/xvfb-run.M5t0ap’ ‘~/tmp/scratch/xvfb-run.OYs1y8’   ‘~/tmp/scratch/xvfb-run.PEHb8b’ ‘~/tmp/scratch/xvfb-run.PqFpjb’   ‘~/tmp/scratch/xvfb-run.RWXtFa’ ‘~/tmp/scratch/xvfb-run.S9Ogce’   ‘~/tmp/scratch/xvfb-run.TOATUK’ ‘~/tmp/scratch/xvfb-run.UV3Az8’   ‘~/tmp/scratch/xvfb-run.VQX1Li’ ‘~/tmp/scratch/xvfb-run.VxPHGT’   ‘~/tmp/scratch/xvfb-run.WHPLPk’ ‘~/tmp/scratch/xvfb-run.Xxilny’   ‘~/tmp/scratch/xvfb-run.ZKvLVQ’ ‘~/tmp/scratch/xvfb-run.chuNkX’   ‘~/tmp/scratch/xvfb-run.e5pqvu’ ‘~/tmp/scratch/xvfb-run.gD0nEP’   ‘~/tmp/scratch/xvfb-run.njVzkI’ ‘~/tmp/scratch/xvfb-run.o4F4tk’   ‘~/tmp/scratch/xvfb-run.qi4e4E’ ‘~/tmp/scratch/xvfb-run.rinXMB’   ‘~/tmp/scratch/xvfb-run.txbSnf’ ‘~/tmp/scratch/xvfb-run.uOME05’   ‘~/tmp/scratch/xvfb-run.v8eDIR’ ‘~/tmp/scratch/xvfb-run.vRWTNA’   ‘~/tmp/scratch/xvfb-run.vvDuGF’ ‘~/tmp/scratch/xvfb-run.wjdjh5’   ‘~/tmp/scratch/xvfb-run.x1CDSN’ ‘~/tmp/scratch/xvfb-run.xKitHw’   ‘~/tmp/scratch/xvfb-run.yXfBQl’   ‘/dev/shm/1ce7617f-7ece-4e5b-97a7-042c4e4e394a’   ‘/dev/shm/1ce7617f-7ece-4e5b-97a7-042c4e4e394a_counter’   ‘/dev/shm/457ce95c-229a-4816-962c-6da5d4113ca4’   ‘/dev/shm/457ce95c-229a-4816-962c-6da5d4113ca4_counter’   ‘/dev/shm/459c6fb3-c19d-4331-93e7-babd0d7ead88’   ‘/dev/shm/459c6fb3-c19d-4331-93e7-babd0d7ead88_counter’   ‘/dev/shm/8e35ff51-f5dd-47c8-9481-15074a4dc7a5’   ‘/dev/shm/8e35ff51-f5dd-47c8-9481-15074a4dc7a5_counter’   ‘/dev/shm/c6a6982f-2451-4a9e-b114-8ffe457eaa04’   ‘/dev/shm/c6a6982f-2451-4a9e-b114-8ffe457eaa04_counter’   ‘/dev/shm/cc43d37c-094c-487e-b2df-9a719ba576d9’   ‘/dev/shm/cc43d37c-094c-487e-b2df-9a719ba576d9_counter’
• DONE

Status: 2 NOTEs