* using log directory ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/ThreeWay.Rcheck’ * using R Under development (unstable) (2025-07-15 r88411) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.2.0-19) 14.2.0 GNU Fortran (Debian 14.2.0-19) 14.2.0 * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘ThreeWay/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘ThreeWay’ version ‘1.1.3’ * checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Paolo Giordani ’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("Maria", "Antonietta", "Del"), family = "Ferraro", role = "aut"), person(given = c("Henk", "A.L."), family = "Kiers", role = "aut"), person(given = "Paolo", family = "Giordani", role = c("aut", "cre"), email = "paolo.giordani@uniroma1.it")) as necessary. Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘ThreeWay’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/ThreeWay-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [22s/28s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) CPdimensionalityplot.Rd:18: Escaped LaTeX specials: \& checkRd: (-1) CPdimensionalityplot.Rd:19: Escaped LaTeX specials: \& checkRd: (-1) Kinship.Rd:15: Escaped LaTeX specials: \& checkRd: (-1) Kinship.Rd:23: Escaped LaTeX specials: \& checkRd: (-1) T2func.Rd:44: Escaped LaTeX specials: \& checkRd: (-1) T2funcrep.Rd:44: Escaped LaTeX specials: \& checkRd: (-1) T3dimensionalityplot.Rd:18: Escaped LaTeX specials: \& checkRd: (-1) T3func.Rd:43: Escaped LaTeX specials: \& checkRd: (-1) T3func.Rd:44: Escaped LaTeX specials: \& checkRd: (-1) T3funcrep.Rd:43: Escaped LaTeX specials: \& checkRd: (-1) T3funcrep.Rd:44: Escaped LaTeX specials: \& checkRd: (-1) TV.Rd:26: Escaped LaTeX specials: \& \& \& checkRd: (-1) TV.Rd:30: Escaped LaTeX specials: \& checkRd: (-1) TV.Rd:31: Escaped LaTeX specials: \& checkRd: (-1) TV.Rd:32: Escaped LaTeX specials: \& checkRd: (-1) TV.Rd:33: Escaped LaTeX specials: \& checkRd: (-1) pcamean.Rd:33: Escaped LaTeX specials: \& checkRd: (-1) threewayanova.Rd:24: Escaped LaTeX specials: \& * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [5s/7s] OK * checking PDF version of manual ... [6s/8s] OK * checking HTML version of manual ... [3s/4s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 2 NOTEs