- using R Under development (unstable) (2026-05-11 r90040)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-17) 15.2.0
GNU Fortran (Debian 15.2.0-17) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-05-11 19:11:27 UTC
- checking for file ‘SPACO/DESCRIPTION’ ... OK
- this is package ‘SPACO’ version ‘1.0.1’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/1s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘SPACO’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-15 (Debian 15.2.0-17) 15.2.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [5s/5s] OK
- checking whether the package can be loaded with stated dependencies ... [5s/7s] OK
- checking whether the package can be unloaded cleanly ... [5s/7s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK
- checking whether the namespace can be unloaded cleanly ... [6s/6s] OK
- checking loading without being on the library search path ... [7s/9s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [25s/33s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... NONE
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [7s/8s] ERROR
Running ‘testthat.R’ [7s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(SPACO)
>
> test_check("SPACO")
Saving _problems/test-SCA-28.R
Saving _problems/test-SCA-35.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 4 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-SCA.R:28:3'): spaco works ────────────────────────────────────
Expected `test$score` to equal `test_Matrix$score`.
Differences:
actual | expected
[1] 0.69318 - 0.76533 [1]
[2] 0.20439 - 0.27748 [2]
[3] 0.00150 - 0.04588 [3]
[4] 0.02160 - 0.40188 [4]
[5] 0.01320 - 0.01340 [5]
[6] 0.37097 - 0.46087 [6]
[7] 0.31929 - 0.38830 [7]
[8] 0.01816 - 0.07608 [8]
[9] 0.05556 - 0.34176 [9]
[10] 0.54163 - 0.61844 [10]
── Failure ('test-SCA.R:35:3'): spaco works ────────────────────────────────────
Expected `test_more$score` to equal `test_more_Matrix$score`.
Differences:
actual | expected
[1] 0.6351026 - 0.6473590 [1]
[2] 0.2699580 - 0.2699598 [2]
[3] 0.0211084 - 0.4460689 [3]
[4] 0.0521827 - 0.1426394 [4]
[5] 0.0106093 - 0.0968129 [5]
[6] 0.0678823 - 0.4138247 [6]
[7] 0.1918702 - 0.1939990 [7]
[8] 0.0493534 - 0.0946227 [8]
[9] 0.0369709 - 0.3304936 [9]
[10] 0.3174628 - 0.4162140 [10]
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 4 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [3s/4s] OK
- checking HTML version of manual ... [0s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR