• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 12:43:05 UTC
• checking for file ‘RapidoPGS/DESCRIPTION’ ... OK
• this is package ‘RapidoPGS’ version ‘2.3.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘RapidoPGS’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [5s/6s] OK
• checking whether the package can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the package can be unloaded cleanly ... [5s/6s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s/6s] OK
• checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
• checking loading without being on the library search path ... [5s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [24s/31s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [4s/5s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/8s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [15s/20s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp07Oidx’ ‘~/tmp/scratch/Rtmp1DxHPS’   ‘~/tmp/scratch/Rtmp1MzFYJ’ ‘~/tmp/scratch/Rtmp1X95b2’   ‘~/tmp/scratch/Rtmp1h0Xh0’ ‘~/tmp/scratch/Rtmp1iL5TX’   ‘~/tmp/scratch/Rtmp1uxonB’ ‘~/tmp/scratch/Rtmp22Pdsr’   ‘~/tmp/scratch/Rtmp24Pwu6’ ‘~/tmp/scratch/Rtmp3170Mx’   ‘~/tmp/scratch/Rtmp33ZR7B’ ‘~/tmp/scratch/Rtmp3IfkLD’   ‘~/tmp/scratch/Rtmp3NTMZg’ ‘~/tmp/scratch/Rtmp3UpMz8’   ‘~/tmp/scratch/Rtmp3v8yFk’ ‘~/tmp/scratch/Rtmp54YY0n’   ‘~/tmp/scratch/Rtmp5LjCri’ ‘~/tmp/scratch/Rtmp5jvBEg’   ‘~/tmp/scratch/Rtmp5qUD5e’ ‘~/tmp/scratch/Rtmp6DHD3o’   ‘~/tmp/scratch/Rtmp6Ip1aL’ ‘~/tmp/scratch/Rtmp6k7RDe’   ‘~/tmp/scratch/Rtmp79Unm5’ ‘~/tmp/scratch/Rtmp7IPXRJ’   ‘~/tmp/scratch/Rtmp8Blw0h’ ‘~/tmp/scratch/Rtmp8Fvpah’   ‘~/tmp/scratch/Rtmp8qb7wu’ ‘~/tmp/scratch/Rtmp91S1bj’   ‘~/tmp/scratch/RtmpA52sZX’ ‘~/tmp/scratch/RtmpAIJUzp’   ‘~/tmp/scratch/RtmpAgoCno’ ‘~/tmp/scratch/RtmpAgzDTt’   ‘~/tmp/scratch/RtmpAvESAq’ ‘~/tmp/scratch/RtmpBB5Uom’   ‘~/tmp/scratch/RtmpBjZCy8’ ‘~/tmp/scratch/RtmpCfJwHD’   ‘~/tmp/scratch/RtmpCnJMZE’ ‘~/tmp/scratch/RtmpCoWyBM’   ‘~/tmp/scratch/RtmpDTtePT’ ‘~/tmp/scratch/RtmpDkp5nz’   ‘~/tmp/scratch/RtmpDojNBl’ ‘~/tmp/scratch/RtmpDqQxRC’   ‘~/tmp/scratch/RtmpER6bf2’ ‘~/tmp/scratch/RtmpEcPtaJ’   ‘~/tmp/scratch/RtmpEghIOO’ ‘~/tmp/scratch/RtmpEmuTNI’   ‘~/tmp/scratch/RtmpFBNIoA’ ‘~/tmp/scratch/RtmpFXK79k’   ‘~/tmp/scratch/RtmpFkJ60u’ ‘~/tmp/scratch/RtmpGjwXbc’   ‘~/tmp/scratch/RtmpHEEDIG’ ‘~/tmp/scratch/RtmpHfTVZO’   ‘~/tmp/scratch/RtmpIMZa1s’ ‘~/tmp/scratch/RtmpITGZ7P’   ‘~/tmp/scratch/RtmpIaC0yn’ ‘~/tmp/scratch/RtmpIjTInT’   ‘~/tmp/scratch/RtmpIkMFi8’ ‘~/tmp/scratch/RtmpJ0BDcw’   ‘~/tmp/scratch/RtmpJoZDR8’ ‘~/tmp/scratch/RtmpKPj9Z0’   ‘~/tmp/scratch/RtmpL9C6mD’ ‘~/tmp/scratch/RtmpLeILpN’   ‘~/tmp/scratch/RtmpMn2IOm’ ‘~/tmp/scratch/RtmpMvfH9z’   ‘~/tmp/scratch/RtmpNIoEzs’ ‘~/tmp/scratch/RtmpNgw1Ua’   ‘~/tmp/scratch/RtmpNwovlz’ ‘~/tmp/scratch/RtmpO4cZ6M’   ‘~/tmp/scratch/RtmpOLxi4z’ ‘~/tmp/scratch/RtmpPJe89i’   ‘~/tmp/scratch/RtmpPTxS4K’ ‘~/tmp/scratch/RtmpPhr4tZ’   ‘~/tmp/scratch/RtmpQDZl3v’ ‘~/tmp/scratch/RtmpQMvEEm’   ‘~/tmp/scratch/RtmpQWLLV1’ ‘~/tmp/scratch/RtmpQfUFnd’   ‘~/tmp/scratch/RtmpRh0zCn’ ‘~/tmp/scratch/RtmpRmnma0’   ‘~/tmp/scratch/RtmpS4V49J’ ‘~/tmp/scratch/RtmpSNVR4U’   ‘~/tmp/scratch/RtmpSXtT8u’ ‘~/tmp/scratch/RtmpSapsac’   ‘~/tmp/scratch/RtmpSm5K9n’ ‘~/tmp/scratch/RtmpSpce1A’   ‘~/tmp/scratch/RtmpT7OVDo’ ‘~/tmp/scratch/RtmpT8oo5d’   ‘~/tmp/scratch/RtmpTHTtHp’ ‘~/tmp/scratch/RtmpTu8IHq’   ‘~/tmp/scratch/RtmpUElFSp’ ‘~/tmp/scratch/RtmpUJl0zl’   ‘~/tmp/scratch/RtmpUZdW6m’ ‘~/tmp/scratch/RtmpVDAcDm’   ‘~/tmp/scratch/RtmpVtPsfy’ ‘~/tmp/scratch/RtmpX3b8TO’   ‘~/tmp/scratch/RtmpX6ZJ6u’ ‘~/tmp/scratch/RtmpXBhyqf’   ‘~/tmp/scratch/RtmpYHRVb6’ ‘~/tmp/scratch/RtmpYuomrE’   ‘~/tmp/scratch/RtmpZSGOPi’ ‘~/tmp/scratch/Rtmpa0MeJp’   ‘~/tmp/scratch/Rtmpa2Kvok’ ‘~/tmp/scratch/Rtmpaobhda’   ‘~/tmp/scratch/RtmpbBlOBY’ ‘~/tmp/scratch/RtmpbWuvjF’   ‘~/tmp/scratch/RtmpbjsHPF’ ‘~/tmp/scratch/RtmpcM6FGg’   ‘~/tmp/scratch/RtmpdCLxjV’ ‘~/tmp/scratch/RtmpdSrslU’   ‘~/tmp/scratch/Rtmpdk0Man’ ‘~/tmp/scratch/Rtmpe2oNMl’   ‘~/tmp/scratch/RtmpeVNq3g’ ‘~/tmp/scratch/RtmpegSnUN’   ‘~/tmp/scratch/Rtmpfpp2JK’ ‘~/tmp/scratch/Rtmpg5OhMp’   ‘~/tmp/scratch/RtmpgJy8jH’ ‘~/tmp/scratch/RtmpgKrVRZ’   ‘~/tmp/scratch/RtmpgTqrg0’ ‘~/tmp/scratch/Rtmpggq66j’   ‘~/tmp/scratch/Rtmph4mE2K’ ‘~/tmp/scratch/Rtmpht0r2I’   ‘~/tmp/scratch/RtmpiGj2HL’ ‘~/tmp/scratch/RtmpiJccYk’   ‘~/tmp/scratch/RtmpiLiIwx’ ‘~/tmp/scratch/RtmpiZVDsK’   ‘~/tmp/scratch/RtmpjIsrKE’ ‘~/tmp/scratch/Rtmpjg8Vzr’   ‘~/tmp/scratch/RtmpkLYANC’ ‘~/tmp/scratch/RtmpkTX7zg’   ‘~/tmp/scratch/RtmplgwZj3’ ‘~/tmp/scratch/RtmplhYLSc’   ‘~/tmp/scratch/RtmpltQyZG’ ‘~/tmp/scratch/Rtmpm4i4Hj’   ‘~/tmp/scratch/RtmpmL1U1k’ ‘~/tmp/scratch/RtmpmkHJ2V’   ‘~/tmp/scratch/RtmpmuLK9W’ ‘~/tmp/scratch/RtmpmzyxYh’   ‘~/tmp/scratch/Rtmpn7DEuR’ ‘~/tmp/scratch/RtmpncXMIK’   ‘~/tmp/scratch/Rtmpnkjcfa’ ‘~/tmp/scratch/RtmpoWjXUM’   ‘~/tmp/scratch/RtmpoZtTU3’ ‘~/tmp/scratch/RtmpoiwFzM’   ‘~/tmp/scratch/Rtmpp0RQEM’ ‘~/tmp/scratch/RtmppPYwgJ’   ‘~/tmp/scratch/RtmpqIGWD8’ ‘~/tmp/scratch/RtmprQTV7Y’   ‘~/tmp/scratch/RtmpriGVlp’ ‘~/tmp/scratch/RtmprjSRnj’   ‘~/tmp/scratch/Rtmpry2z89’ ‘~/tmp/scratch/Rtmps4Owts’   ‘~/tmp/scratch/Rtmptqf4p2’ ‘~/tmp/scratch/RtmptsYXa6’   ‘~/tmp/scratch/Rtmpu487hz’ ‘~/tmp/scratch/RtmpuAqek6’   ‘~/tmp/scratch/RtmpuE8Azi’ ‘~/tmp/scratch/RtmpuGdQlW’   ‘~/tmp/scratch/RtmputLict’ ‘~/tmp/scratch/Rtmpv20PzL’   ‘~/tmp/scratch/Rtmpv246HC’ ‘~/tmp/scratch/Rtmpv4VICz’   ‘~/tmp/scratch/RtmpvC5gBh’ ‘~/tmp/scratch/RtmpvoE4fQ’   ‘~/tmp/scratch/RtmpvvGHqu’ ‘~/tmp/scratch/Rtmpw4EG9P’   ‘~/tmp/scratch/RtmpwGGjGj’ ‘~/tmp/scratch/RtmpwT1dUF’   ‘~/tmp/scratch/RtmpwjGT8Z’ ‘~/tmp/scratch/Rtmpx95LIh’   ‘~/tmp/scratch/RtmpyH1U00’ ‘~/tmp/scratch/RtmpybK3yt’   ‘~/tmp/scratch/Rtmpyz6lSy’ ‘~/tmp/scratch/RtmpzQo1hQ’   ‘~/tmp/scratch/cc08W6vw.s’ ‘~/tmp/scratch/cc139qz4.s’   ‘~/tmp/scratch/cc79WMsf.s’ ‘~/tmp/scratch/cc90WNAH.s’   ‘~/tmp/scratch/ccDPja3c.s’ ‘~/tmp/scratch/ccFPEpDE.s’   ‘~/tmp/scratch/ccUTJatO.s’ ‘~/tmp/scratch/xvfb-run.2P3PHA’   ‘~/tmp/scratch/xvfb-run.3VIcwo’ ‘~/tmp/scratch/xvfb-run.63Ne0m’   ‘~/tmp/scratch/xvfb-run.6ZhD84’ ‘~/tmp/scratch/xvfb-run.6ujl8v’   ‘~/tmp/scratch/xvfb-run.72Cumj’ ‘~/tmp/scratch/xvfb-run.7fDxSa’   ‘~/tmp/scratch/xvfb-run.7taCHv’ ‘~/tmp/scratch/xvfb-run.8wZp8M’   ‘~/tmp/scratch/xvfb-run.ARJmGG’ ‘~/tmp/scratch/xvfb-run.BIlABX’   ‘~/tmp/scratch/xvfb-run.BPSLFY’ ‘~/tmp/scratch/xvfb-run.C5Ii63’   ‘~/tmp/scratch/xvfb-run.CQvv93’ ‘~/tmp/scratch/xvfb-run.CzOaCj’   ‘~/tmp/scratch/xvfb-run.D6WEz2’ ‘~/tmp/scratch/xvfb-run.DJfJs0’   ‘~/tmp/scratch/xvfb-run.Fe0065’ ‘~/tmp/scratch/xvfb-run.FjigvR’   ‘~/tmp/scratch/xvfb-run.FqcHqE’ ‘~/tmp/scratch/xvfb-run.HlCMiI’   ‘~/tmp/scratch/xvfb-run.HswMZ3’ ‘~/tmp/scratch/xvfb-run.KNfwyH’   ‘~/tmp/scratch/xvfb-run.LQ4RAo’ ‘~/tmp/scratch/xvfb-run.LjbqSX’   ‘~/tmp/scratch/xvfb-run.LroVtZ’ ‘~/tmp/scratch/xvfb-run.M1OaZv’   ‘~/tmp/scratch/xvfb-run.O67OuK’ ‘~/tmp/scratch/xvfb-run.OKNOV5’   ‘~/tmp/scratch/xvfb-run.PiACxr’ ‘~/tmp/scratch/xvfb-run.QwuVsz’   ‘~/tmp/scratch/xvfb-run.TEPjGJ’ ‘~/tmp/scratch/xvfb-run.TbSH7y’   ‘~/tmp/scratch/xvfb-run.V3qt0n’ ‘~/tmp/scratch/xvfb-run.WOv6TY’   ‘~/tmp/scratch/xvfb-run.X1dcSv’ ‘~/tmp/scratch/xvfb-run.XLp21a’   ‘~/tmp/scratch/xvfb-run.YJocIS’ ‘~/tmp/scratch/xvfb-run.YrpGfg’   ‘~/tmp/scratch/xvfb-run.agEaRB’ ‘~/tmp/scratch/xvfb-run.aoHUgm’   ‘~/tmp/scratch/xvfb-run.apkfUm’ ‘~/tmp/scratch/xvfb-run.b5AYbt’   ‘~/tmp/scratch/xvfb-run.bb6bWc’ ‘~/tmp/scratch/xvfb-run.cqWfIQ’   ‘~/tmp/scratch/xvfb-run.d1Cmwb’ ‘~/tmp/scratch/xvfb-run.djHsYj’   ‘~/tmp/scratch/xvfb-run.fcVLCb’ ‘~/tmp/scratch/xvfb-run.flZaTi’   ‘~/tmp/scratch/xvfb-run.gAyBRo’ ‘~/tmp/scratch/xvfb-run.gKLiGR’   ‘~/tmp/scratch/xvfb-run.hFkxPJ’ ‘~/tmp/scratch/xvfb-run.iK3Hq3’   ‘~/tmp/scratch/xvfb-run.ioJsYf’ ‘~/tmp/scratch/xvfb-run.jRHHeh’   ‘~/tmp/scratch/xvfb-run.kPixHX’ ‘~/tmp/scratch/xvfb-run.lQUs5W’   ‘~/tmp/scratch/xvfb-run.nllbj7’ ‘~/tmp/scratch/xvfb-run.o7oTIU’   ‘~/tmp/scratch/xvfb-run.pEYURa’ ‘~/tmp/scratch/xvfb-run.pPcSMa’   ‘~/tmp/scratch/xvfb-run.pZZkOQ’ ‘~/tmp/scratch/xvfb-run.q01kHX’   ‘~/tmp/scratch/xvfb-run.rRIi25’ ‘~/tmp/scratch/xvfb-run.rnS3Nw’   ‘~/tmp/scratch/xvfb-run.s00Crm’ ‘~/tmp/scratch/xvfb-run.sZ2O1h’   ‘~/tmp/scratch/xvfb-run.tepTzM’ ‘~/tmp/scratch/xvfb-run.tqmTkA’   ‘~/tmp/scratch/xvfb-run.u2n8ZW’ ‘~/tmp/scratch/xvfb-run.yRiQOX’   ‘~/tmp/scratch/xvfb-run.zDOItJ’ ‘~/tmp/scratch/xvfb-run.zedFjw’
• DONE

Status: 1 NOTE