- using R Under development (unstable) (2025-10-20 r88955)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-15 (Debian 15.2.0-4) 15.2.0
GNU Fortran (Debian 15.2.0-4) 15.2.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘PointedSDMs/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘PointedSDMs’ version ‘2.1.4’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... INFO
Package suggested but not available for checking: ‘INLA’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘PointedSDMs’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [9s/11s] OK
- checking whether the package can be loaded with stated dependencies ... [9s/14s] OK
- checking whether the package can be unloaded cleanly ... [9s/12s] OK
- checking whether the namespace can be loaded with stated dependencies ... [8s/11s] OK
- checking whether the namespace can be unloaded cleanly ... [9s/12s] OK
- checking loading without being on the library search path ... [9s/12s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [44s/57s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... INFO
Package unavailable to check Rd xrefs: ‘INLA’
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [2s/2s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [8s/10s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [9s/12s] OK
Running ‘testthat.R’ [9s/12s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [25s/40s] OK
- checking PDF version of manual ... [7s/10s] OK
- checking HTML version of manual ... [2s/4s] NOTE
Found the following HTML validation problems:
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print.blockedCV.html:51:1 (print.blockedCV.Rd:12): Warning: missing </ul> before </div>
print.blockedCVpred.html:51:1 (print.blockedCVpred.Rd:12): Warning: missing </ul> before </div>
print.bruSDM.html:51:1 (print.bruSDM.Rd:12): Warning: missing </ul> before </div>
print.bruSDM_predict.html:51:1 (print.bruSDM_predict.Rd:12): Warning: missing </ul> before </div>
print.datasetOut.html:51:1 (print.datasetOut.Rd:12): Warning: missing </ul> before </div>
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- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE